RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 ZNF48Q96MX3 618 aaPredicted RBP4.92□□□□□ -1.62
PRKCH-220ENST00000556164 SORT1Q99523 831 aa4.92□□□□□ -1.62
PRKCH-220ENST00000556164 BCL2L14Q9BZR8 327 aa4.92□□□□□ -1.62
PRKCH-220ENST00000556164 C20orf27Q9GZN8 174 aa4.92□□□□□ -1.62
PRKCH-220ENST00000556164 SLITRK2Q9H156 845 aa4.92□□□□□ -1.62
PRKCH-220ENST00000556164 LRMDAQ9H2I8 198 aa4.92□□□□□ -1.62
PRKCH-220ENST00000556164 C1orf198Q9H425 327 aa4.92□□□□□ -1.62
PRKCH-220ENST00000556164 MEAF6Q9HAF1 191 aa4.92□□□□□ -1.62
PRKCH-220ENST00000556164 MMP26Q9NRE1 261 aa4.92□□□□□ -1.62
PRKCH-220ENST00000556164 TMEM38BQ9NVV0 291 aa4.92□□□□□ -1.62
PRKCH-220ENST00000556164 THUMPD1Q9NXG2 353 aaKnown RBP4.92□□□□□ -1.62
PRKCH-220ENST00000556164 MRPL39Q9NYK5 338 aaKnown RBP4.92□□□□□ -1.62
PRKCH-220ENST00000556164 PLEK2Q9NYT0 353 aa4.92□□□□□ -1.62
PRKCH-220ENST00000556164 GLTPQ9NZD2 209 aa4.92□□□□□ -1.62
PRKCH-220ENST00000556164 SLAMF8Q9P0V8 285 aa4.92□□□□□ -1.62
PRKCH-220ENST00000556164 LGALS13Q9UHV8 139 aa4.92□□□□□ -1.62
PRKCH-220ENST00000556164 PURGQ9UJV8 347 aaKnown RBP4.92□□□□□ -1.62
PRKCH-220ENST00000556164 NDRG4Q9ULP0 352 aaKnown RBP4.92□□□□□ -1.62
PRKCH-220ENST00000556164 A4GNTQ9UNA3 340 aa4.92□□□□□ -1.62
PRKCH-220ENST00000556164 AUP1Q9Y679 476 aa4.92□□□□□ -1.62
PRKCH-220ENST00000556164 PPIAL4EA0A075B759 164 aa4.91□□□□□ -1.62
PRKCH-220ENST00000556164 IGHV3OR16-10A0A075B7F0 116 aa4.91□□□□□ -1.62
PRKCH-220ENST00000556164 PPIAL4CA0A0B4J2A2 164 aa4.91□□□□□ -1.62
PRKCH-220ENST00000556164 PPIAL4DF5H284 164 aa4.91□□□□□ -1.62
PRKCH-220ENST00000556164 PLPP3O14495 311 aa4.91□□□□□ -1.62
PRKCH-220ENST00000556164 SDHDO14521 159 aa4.91□□□□□ -1.62
PRKCH-220ENST00000556164 TYROBPO43914 113 aa4.91□□□□□ -1.62
PRKCH-220ENST00000556164 OR6A2O95222 327 aa4.91□□□□□ -1.62
PRKCH-220ENST00000556164 SNAP29O95721 258 aa4.91□□□□□ -1.62
PRKCH-220ENST00000556164 GPANK1O95872 356 aa4.91□□□□□ -1.62
PRKCH-220ENST00000556164 PTHP01270 115 aa4.91□□□□□ -1.62
PRKCH-220ENST00000556164 IGHV1-46P01743 117 aa4.91□□□□□ -1.62
PRKCH-220ENST00000556164 IGHMP01871 453 aa4.91□□□□□ -1.62
PRKCH-220ENST00000556164 IL6P05231 212 aa4.91□□□□□ -1.62
PRKCH-220ENST00000556164 SBK2P0C263 348 aa4.91□□□□□ -1.62
PRKCH-220ENST00000556164 ZCCHC18P0CG32 403 aa4.91□□□□□ -1.62
PRKCH-220ENST00000556164 PPIAL4FP0DN26 164 aa4.91□□□□□ -1.62
PRKCH-220ENST00000556164 FSTP19883 344 aa4.91□□□□□ -1.62
PRKCH-220ENST00000556164 CCNOP22674 350 aa4.91□□□□□ -1.62
PRKCH-220ENST00000556164 APLNRP35414 380 aa4.91□□□□□ -1.62
PRKCH-220ENST00000556164 UCP2P55851 309 aa4.91□□□□□ -1.62
PRKCH-220ENST00000556164 RGS8P57771 180 aaPredicted RBP4.91□□□□□ -1.62
PRKCH-220ENST00000556164 HSF2Q03933 536 aa4.91□□□□□ -1.62
PRKCH-220ENST00000556164 SRSF4Q08170 494 aaKnown RBP4.91□□□□□ -1.62
PRKCH-220ENST00000556164 ZNF154Q13106 437 aa4.91□□□□□ -1.62
PRKCH-220ENST00000556164 HNRNPA0Q13151 305 aaKnown RBP4.91□□□□□ -1.62
PRKCH-220ENST00000556164 ALKBH1Q13686 389 aaKnown RBP4.91□□□□□ -1.62
PRKCH-220ENST00000556164 MELKQ14680 651 aa4.91□□□□□ -1.62
PRKCH-220ENST00000556164 SLC9A3R2Q15599 337 aa4.91□□□□□ -1.62
PRKCH-220ENST00000556164 MAJINQ3KP22 176 aa4.91□□□□□ -1.62
PRKCH-220ENST00000556164 SLC36A2Q495M3 483 aa4.91□□□□□ -1.62
PRKCH-220ENST00000556164 KLF17Q5JT82 389 aaPredicted RBP4.91□□□□□ -1.62
PRKCH-220ENST00000556164 C6orf10Q5SRN2 563 aa4.91□□□□□ -1.62
PRKCH-220ENST00000556164 CEP85LQ5SZL2 805 aa4.91□□□□□ -1.62
PRKCH-220ENST00000556164 SPATA46Q5T0L3 261 aa4.91□□□□□ -1.62
PRKCH-220ENST00000556164 FAM91A1Q658Y4 838 aa4.91□□□□□ -1.62
PRKCH-220ENST00000556164 ULK3Q6PHR2 472 aa4.91□□□□□ -1.62
PRKCH-220ENST00000556164 CD300LDQ6UXZ3 194 aa4.91□□□□□ -1.62
PRKCH-220ENST00000556164 NHLRC1Q6VVB1 395 aa4.91□□□□□ -1.62
PRKCH-220ENST00000556164 WDR88Q6ZMY6 472 aa4.91□□□□□ -1.62
PRKCH-220ENST00000556164 SLC35D2Q76EJ3 337 aa4.91□□□□□ -1.62
PRKCH-220ENST00000556164 SLC16A14Q7RTX9 510 aa4.91□□□□□ -1.62
PRKCH-220ENST00000556164 DPPA2Q7Z7J5 298 aa4.91□□□□□ -1.62
PRKCH-220ENST00000556164 COMTD1Q86VU5 262 aa4.91□□□□□ -1.62
PRKCH-220ENST00000556164 CMTM4Q8IZR5 234 aa4.91□□□□□ -1.62
PRKCH-220ENST00000556164 LRRC18Q8N456 261 aa4.91□□□□□ -1.62
PRKCH-220ENST00000556164 CPEB3Q8NE35 698 aaKnown RBP4.91□□□□□ -1.62
PRKCH-220ENST00000556164 OR1J1Q8NGS3 322 aa4.91□□□□□ -1.62
PRKCH-220ENST00000556164 OR5J2Q8NH18 312 aa4.91□□□□□ -1.62
PRKCH-220ENST00000556164 OR6S1Q8NH40 331 aa4.91□□□□□ -1.62
PRKCH-220ENST00000556164 OR6X1Q8NH79 312 aa4.91□□□□□ -1.62
PRKCH-220ENST00000556164 GEMIN6Q8WXD5 167 aaKnown RBP4.91□□□□□ -1.62
PRKCH-220ENST00000556164 TMEM54Q969K7 222 aa4.91□□□□□ -1.62
PRKCH-220ENST00000556164 TMIGD2Q96BF3 282 aa4.91□□□□□ -1.62
PRKCH-220ENST00000556164 ITCHQ96J02 903 aa4.91□□□□□ -1.62
PRKCH-220ENST00000556164 DCLRE1CQ96SD1 692 aaKnown RBP4.91□□□□□ -1.62
PRKCH-220ENST00000556164 INTS14Q96SY0 518 aa4.91□□□□□ -1.62
PRKCH-220ENST00000556164 EGLN1Q9GZT9 426 aa4.91□□□□□ -1.62
PRKCH-220ENST00000556164 RMND5AQ9H871 391 aa4.91□□□□□ -1.62
PRKCH-220ENST00000556164 TMEM27Q9HBJ8 222 aa4.91□□□□□ -1.62
PRKCH-220ENST00000556164 BCL2L10Q9HD36 194 aa4.91□□□□□ -1.62
PRKCH-220ENST00000556164 A4GALTQ9NPC4 353 aa4.91□□□□□ -1.62
PRKCH-220ENST00000556164 TCF7L2Q9NQB0 619 aa4.91□□□□□ -1.62
PRKCH-220ENST00000556164 TESQ9UGI8 421 aaKnown RBP4.91□□□□□ -1.62
PRKCH-220ENST00000556164 NPTNQ9Y639 398 aa4.91□□□□□ -1.62
PRKCH-220ENST00000556164 A0A0B4J2E0 115 aa4.9□□□□□ -1.63
PRKCH-220ENST00000556164 MDFIC2A0A1B0GVS7 189 aa4.9□□□□□ -1.63
PRKCH-220ENST00000556164 A0A1B0GX12 115 aa4.9□□□□□ -1.63
PRKCH-220ENST00000556164 ZSCAN5BA6NJL1 495 aa4.9□□□□□ -1.63
PRKCH-220ENST00000556164 NPIPB13A6NJU9 1138 aa4.9□□□□□ -1.63
PRKCH-220ENST00000556164 NPIPB5A8MRT5 1133 aa4.9□□□□□ -1.63
PRKCH-220ENST00000556164 NPIPB4C9JG80 1138 aa4.9□□□□□ -1.63
PRKCH-220ENST00000556164 USP17L23D6RBM5 183 aa4.9□□□□□ -1.63
PRKCH-220ENST00000556164 TRAPPC2LH3BP13 241 aa4.9□□□□□ -1.63
PRKCH-220ENST00000556164 CLDN34H7C241 214 aa4.9□□□□□ -1.63
PRKCH-220ENST00000556164 TM9SF1O15321 606 aa4.9□□□□□ -1.63
PRKCH-220ENST00000556164 BIRC5O15392 142 aa4.9□□□□□ -1.63
PRKCH-220ENST00000556164 RNF13O43567 381 aa4.9□□□□□ -1.63
PRKCH-220ENST00000556164 TPST1O60507 370 aa4.9□□□□□ -1.63
PRKCH-220ENST00000556164 E2F6O75461 281 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms