RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 SLC6A6P31641 620 aa16.55■□□□□ 0.24
PRKCH-219ENST00000555906 ZNF181Q2M3W8 571 aa16.55■□□□□ 0.24
PRKCH-219ENST00000555906 KRTAP27-1Q3LI81 207 aa16.55■□□□□ 0.24
PRKCH-219ENST00000555906 LEG1Q6P5S2 330 aa16.55■□□□□ 0.24
PRKCH-219ENST00000555906 COLCA1Q6ZS62 124 aa16.55■□□□□ 0.24
PRKCH-219ENST00000555906 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.55■□□□□ 0.24
PRKCH-219ENST00000555906 JAZF1Q86VZ6 243 aa16.55■□□□□ 0.24
PRKCH-219ENST00000555906 SLC26A10Q8NG04 563 aa16.55■□□□□ 0.24
PRKCH-219ENST00000555906 SSBP3Q9BWW4 388 aaPredicted RBP16.55■□□□□ 0.24
PRKCH-219ENST00000555906 OR52D1Q9H346 318 aa16.55■□□□□ 0.24
PRKCH-219ENST00000555906 GORASP2Q9H8Y8 452 aa16.55■□□□□ 0.24
PRKCH-219ENST00000555906 ZNF69Q9UC07 566 aa16.55■□□□□ 0.24
PRKCH-219ENST00000555906 B9D1Q9UPM9 204 aa16.55■□□□□ 0.24
PRKCH-219ENST00000555906 DNAJC9-AS1A6NH13 148 aa16.54■□□□□ 0.24
PRKCH-219ENST00000555906 GMNNO75496 209 aa16.54■□□□□ 0.24
PRKCH-219ENST00000555906 PPIAL4GP0DN37 164 aa16.54■□□□□ 0.24
PRKCH-219ENST00000555906 HKR1P10072 659 aa16.54■□□□□ 0.24
PRKCH-219ENST00000555906 RPS2P15880 293 aaKnown RBP16.54■□□□□ 0.24
PRKCH-219ENST00000555906 SELEP16581 610 aa16.54■□□□□ 0.24
PRKCH-219ENST00000555906 FPR3P25089 353 aa16.54■□□□□ 0.24
PRKCH-219ENST00000555906 CENPAP49450 140 aa16.54■□□□□ 0.24
PRKCH-219ENST00000555906 SMIM11AP58511 58 aa16.54■□□□□ 0.24
PRKCH-219ENST00000555906 SPIBQ01892 262 aa16.54■□□□□ 0.24
PRKCH-219ENST00000555906 CORO6Q6QEF8 472 aa16.54■□□□□ 0.24
PRKCH-219ENST00000555906 OR6V1Q8N148 313 aa16.54■□□□□ 0.24
PRKCH-219ENST00000555906 ZNF420Q8TAQ5 688 aaPredicted RBP16.54■□□□□ 0.24
PRKCH-219ENST00000555906 C1QTNF5Q9BXJ0 243 aa16.54■□□□□ 0.24
PRKCH-219ENST00000555906 ADA2Q9NZK5 511 aa16.54■□□□□ 0.24
PRKCH-219ENST00000555906 LRRC30A6NM36 301 aa16.53■□□□□ 0.24
PRKCH-219ENST00000555906 GADD45GO95257 159 aa16.53■□□□□ 0.24
PRKCH-219ENST00000555906 CYB5R3P00387 301 aaPredicted RBP16.53■□□□□ 0.24
PRKCH-219ENST00000555906 RENP00797 406 aa16.53■□□□□ 0.24
PRKCH-219ENST00000555906 WNT2P09544 360 aa16.53■□□□□ 0.24
PRKCH-219ENST00000555906 EGR1P18146 543 aa16.53■□□□□ 0.24
PRKCH-219ENST00000555906 PRTN3P24158 256 aa16.53■□□□□ 0.24
PRKCH-219ENST00000555906 PAX2Q02962 417 aa16.53■□□□□ 0.24
PRKCH-219ENST00000555906 PAX8Q06710 450 aa16.53■□□□□ 0.24
PRKCH-219ENST00000555906 FOXL1Q12952 345 aa16.53■□□□□ 0.24
PRKCH-219ENST00000555906 RFX4Q33E94 735 aa16.53■□□□□ 0.24
PRKCH-219ENST00000555906 SLC18B1Q6NT16 456 aa16.53■□□□□ 0.24
PRKCH-219ENST00000555906 CFAP77Q6ZQR2 320 aa16.53■□□□□ 0.24
PRKCH-219ENST00000555906 ZBTB46Q86UZ6 589 aa16.53■□□□□ 0.24
PRKCH-219ENST00000555906 KLBQ86Z14 1044 aa16.53■□□□□ 0.24
PRKCH-219ENST00000555906 C1orf87Q8N0U7 546 aa16.53■□□□□ 0.24
PRKCH-219ENST00000555906 BHLHE23Q8NDY6 225 aa16.53■□□□□ 0.24
PRKCH-219ENST00000555906 NMNAT3Q96T66 252 aa16.53■□□□□ 0.24
PRKCH-219ENST00000555906 HCAR1Q9BXC0 346 aa16.53■□□□□ 0.24
PRKCH-219ENST00000555906 MIOXQ9UGB7 285 aa16.53■□□□□ 0.24
PRKCH-219ENST00000555906 MAGEL2Q9UJ55 1249 aa16.53■□□□□ 0.24
PRKCH-219ENST00000555906 V9GYQ6 96 aa16.53■□□□□ 0.24
PRKCH-219ENST00000555906 F5H5P2 479 aa16.52■□□□□ 0.24
PRKCH-219ENST00000555906 H0YL77 283 aa16.52■□□□□ 0.24
PRKCH-219ENST00000555906 ACSM4P0C7M7 580 aa16.52■□□□□ 0.24
PRKCH-219ENST00000555906 HIST1H1CP16403 213 aaKnown RBP16.52■□□□□ 0.24
PRKCH-219ENST00000555906 GATA4P43694 442 aa16.52■□□□□ 0.24
PRKCH-219ENST00000555906 GNB2P62879 340 aa16.52■□□□□ 0.24
PRKCH-219ENST00000555906 ECH1Q13011 328 aa16.52■□□□□ 0.24
PRKCH-219ENST00000555906 RSPO1Q2MKA7 263 aaPredicted RBP16.52■□□□□ 0.24
PRKCH-219ENST00000555906 ZNF404Q494X3 552 aa16.52■□□□□ 0.24
PRKCH-219ENST00000555906 SLC36A3Q495N2 470 aa16.52■□□□□ 0.24
PRKCH-219ENST00000555906 BTNL3Q6UXE8 466 aa16.52■□□□□ 0.24
PRKCH-219ENST00000555906 LRRN1Q6UXK5 716 aa16.52■□□□□ 0.24
PRKCH-219ENST00000555906 MOGAT3Q86VF5 341 aa16.52■□□□□ 0.24
PRKCH-219ENST00000555906 DACT3Q96B18 629 aaPredicted RBP16.52■□□□□ 0.24
PRKCH-219ENST00000555906 NEIL1Q96FI4 390 aaPredicted RBP16.52■□□□□ 0.24
PRKCH-219ENST00000555906 PYURFQ96I23 114 aa16.52■□□□□ 0.24
PRKCH-219ENST00000555906 C1orf147Q96MC9 270 aaPredicted RBP16.52■□□□□ 0.24
PRKCH-219ENST00000555906 ATF6BQ99941 703 aa16.52■□□□□ 0.24
PRKCH-219ENST00000555906 TMEM165Q9HC07 324 aa16.52■□□□□ 0.24
PRKCH-219ENST00000555906 RPRD1BQ9NQG5 326 aaKnown RBP16.52■□□□□ 0.24
PRKCH-219ENST00000555906 MEGF8Q7Z7M0 2845 aa16.51■□□□□ 0.23
PRKCH-219ENST00000555906 PKD1L1Q8TDX9 2849 aa16.51■□□□□ 0.23
PRKCH-219ENST00000555906 IGHV2-70DA0A0C4DH43 119 aa16.51■□□□□ 0.23
PRKCH-219ENST00000555906 CD80P33681 288 aa16.51■□□□□ 0.23
PRKCH-219ENST00000555906 ZNF620Q6ZNG0 422 aa16.51■□□□□ 0.23
PRKCH-219ENST00000555906 C9orf139Q6ZV77 190 aa16.51■□□□□ 0.23
PRKCH-219ENST00000555906 NLRC3Q7RTR2 1065 aa16.51■□□□□ 0.23
PRKCH-219ENST00000555906 LINC00346Q8IVM7 164 aa16.51■□□□□ 0.23
PRKCH-219ENST00000555906 BCL6BQ8N143 479 aaPredicted RBP16.51■□□□□ 0.23
PRKCH-219ENST00000555906 PARP8Q8N3A8 854 aa16.51■□□□□ 0.23
PRKCH-219ENST00000555906 RNF148Q8N7C7 305 aa16.51■□□□□ 0.23
PRKCH-219ENST00000555906 CELF2-AS1Q8N7Q2 184 aa16.51■□□□□ 0.23
PRKCH-219ENST00000555906 OR4K13Q8NH42 304 aa16.51■□□□□ 0.23
PRKCH-219ENST00000555906 PLEKHA8Q96JA3 519 aa16.51■□□□□ 0.23
PRKCH-219ENST00000555906 ZNF48Q96MX3 618 aaPredicted RBP16.51■□□□□ 0.23
PRKCH-219ENST00000555906 PITX2Q99697 317 aa16.51■□□□□ 0.23
PRKCH-219ENST00000555906 TMEM246Q9BRR3 403 aa16.51■□□□□ 0.23
PRKCH-219ENST00000555906 ZNF747Q9BV97 191 aa16.51■□□□□ 0.23
PRKCH-219ENST00000555906 IFT27Q9BW83 186 aa16.51■□□□□ 0.23
PRKCH-219ENST00000555906 WDR76Q9H967 626 aa16.51■□□□□ 0.23
PRKCH-219ENST00000555906 SRA1Q9HD15 236 aaKnown RBP16.51■□□□□ 0.23
PRKCH-219ENST00000555906 PNRC2Q9NPJ4 139 aaKnown RBP16.51■□□□□ 0.23
PRKCH-219ENST00000555906 TMEM100Q9NV29 134 aa16.51■□□□□ 0.23
PRKCH-219ENST00000555906 CYB5R1Q9UHQ9 305 aa16.51■□□□□ 0.23
PRKCH-219ENST00000555906 TRRAPQ9Y4A5 3859 aa16.51■□□□□ 0.23
PRKCH-219ENST00000555906 CLDN34H7C241 214 aa16.5■□□□□ 0.23
PRKCH-219ENST00000555906 IDH3BO43837 385 aa16.5■□□□□ 0.23
PRKCH-219ENST00000555906 OR10H3O60404 316 aa16.5■□□□□ 0.23
PRKCH-219ENST00000555906 ZNF205O95201 554 aa16.5■□□□□ 0.23
PRKCH-219ENST00000555906 RNASE1P07998 156 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms