RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 ACSM5Q6NUN0 579 aa17.41■□□□□ 0.38
VTI1B-205ENST00000555543 HIPK1Q86Z02 1210 aa17.41■□□□□ 0.38
VTI1B-205ENST00000555543 CLDND2Q8NHS1 167 aa17.41■□□□□ 0.38
VTI1B-205ENST00000555543 APOBEC3DQ96AK3 386 aaPredicted RBP17.41■□□□□ 0.38
VTI1B-205ENST00000555543 HAVCR1Q96D42 359 aa17.41■□□□□ 0.38
VTI1B-205ENST00000555543 COG8Q96MW5 612 aa17.41■□□□□ 0.38
VTI1B-205ENST00000555543 F5H5K5 113 aa17.4■□□□□ 0.38
VTI1B-205ENST00000555543 LMX1BO60663 402 aa17.4■□□□□ 0.38
VTI1B-205ENST00000555543 IFNGP01579 166 aa17.4■□□□□ 0.38
VTI1B-205ENST00000555543 ZNF3P17036 446 aa17.4■□□□□ 0.38
VTI1B-205ENST00000555543 ANOS1P23352 680 aa17.4■□□□□ 0.38
VTI1B-205ENST00000555543 POU1F1P28069 291 aa17.4■□□□□ 0.38
VTI1B-205ENST00000555543 LIPAP38571 399 aa17.4■□□□□ 0.38
VTI1B-205ENST00000555543 RASSF2P50749 326 aa17.4■□□□□ 0.38
VTI1B-205ENST00000555543 CDK5R2Q13319 367 aa17.4■□□□□ 0.38
VTI1B-205ENST00000555543 LINC01590Q5TEZ4 76 aa17.4■□□□□ 0.38
VTI1B-205ENST00000555543 FAM166AQ6J272 317 aa17.4■□□□□ 0.38
VTI1B-205ENST00000555543 FBXW12Q6X9E4 464 aa17.4■□□□□ 0.38
VTI1B-205ENST00000555543 COLCA1Q6ZS62 124 aa17.4■□□□□ 0.38
VTI1B-205ENST00000555543 NAA40Q86UY6 237 aa17.4■□□□□ 0.38
VTI1B-205ENST00000555543 OR6K6Q8NGW6 343 aa17.4■□□□□ 0.38
VTI1B-205ENST00000555543 HPS1Q92902 700 aa17.4■□□□□ 0.38
VTI1B-205ENST00000555543 UTP4Q969X6 686 aaKnown RBP17.4■□□□□ 0.38
VTI1B-205ENST00000555543 C1QTNF5Q9BXJ0 243 aa17.4■□□□□ 0.38
VTI1B-205ENST00000555543 TREM2Q9NZC2 230 aa17.4■□□□□ 0.38
VTI1B-205ENST00000555543 ZDHHC8Q9ULC8 765 aa17.4■□□□□ 0.38
VTI1B-205ENST00000555543 KIAA1324LA8MWY0 1029 aaPredicted RBP17.39■□□□□ 0.37
VTI1B-205ENST00000555543 ATP5HO75947 161 aa17.39■□□□□ 0.37
VTI1B-205ENST00000555543 TGFAP01135 160 aa17.39■□□□□ 0.37
VTI1B-205ENST00000555543 CD55P08174 381 aa17.39■□□□□ 0.37
VTI1B-205ENST00000555543 RAC2P15153 192 aa17.39■□□□□ 0.37
VTI1B-205ENST00000555543 FMO3P31513 532 aa17.39■□□□□ 0.37
VTI1B-205ENST00000555543 RBMXP38159 391 aaKnown RBP17.39■□□□□ 0.37
VTI1B-205ENST00000555543 ENTPD1P49961 510 aa17.39■□□□□ 0.37
VTI1B-205ENST00000555543 PRSS12P56730 875 aa17.39■□□□□ 0.37
VTI1B-205ENST00000555543 ECH1Q13011 328 aa17.39■□□□□ 0.37
VTI1B-205ENST00000555543 GINS1Q14691 196 aa17.39■□□□□ 0.37
VTI1B-205ENST00000555543 PCK2Q16822 640 aa17.39■□□□□ 0.37
VTI1B-205ENST00000555543 ZMAT1Q5H9K5 638 aa17.39■□□□□ 0.37
VTI1B-205ENST00000555543 AVPI1Q5T686 147 aa17.39■□□□□ 0.37
VTI1B-205ENST00000555543 SLC27A4Q6P1M0 643 aa17.39■□□□□ 0.37
VTI1B-205ENST00000555543 SHQ1Q6PI26 577 aaKnown RBP17.39■□□□□ 0.37
VTI1B-205ENST00000555543 DCXRQ7Z4W1 244 aa17.39■□□□□ 0.37
VTI1B-205ENST00000555543 OR5AS1Q8N127 324 aa17.39■□□□□ 0.37
VTI1B-205ENST00000555543 PTP4A1Q93096 173 aa17.39■□□□□ 0.37
VTI1B-205ENST00000555543 DDX28Q9NUL7 540 aaKnown RBP17.39■□□□□ 0.37
VTI1B-205ENST00000555543 TMEM160Q9NX00 188 aa17.39■□□□□ 0.37
VTI1B-205ENST00000555543 TANC2Q9HCD6 1990 aa17.39■□□□□ 0.37
VTI1B-205ENST00000555543 EBAG9O00559 213 aa17.38■□□□□ 0.37
VTI1B-205ENST00000555543 SPARCP09486 303 aa17.38■□□□□ 0.37
VTI1B-205ENST00000555543 OSMP13725 252 aa17.38■□□□□ 0.37
VTI1B-205ENST00000555543 ANXA8P13928 327 aa17.38■□□□□ 0.37
VTI1B-205ENST00000555543 CDH15P55291 814 aa17.38■□□□□ 0.37
VTI1B-205ENST00000555543 OR2T2Q6IF00 324 aa17.38■□□□□ 0.37
VTI1B-205ENST00000555543 ATG16L2Q8NAA4 619 aa17.38■□□□□ 0.37
VTI1B-205ENST00000555543 OR5L1Q8NGL2 311 aa17.38■□□□□ 0.37
VTI1B-205ENST00000555543 ELMOD3Q96FG2 381 aa17.38■□□□□ 0.37
VTI1B-205ENST00000555543 C1orf159Q96HA4 380 aa17.38■□□□□ 0.37
VTI1B-205ENST00000555543 DIRC2Q96SL1 478 aa17.38■□□□□ 0.37
VTI1B-205ENST00000555543 EGLN1Q9GZT9 426 aa17.38■□□□□ 0.37
VTI1B-205ENST00000555543 ZNF556Q9HAH1 456 aa17.38■□□□□ 0.37
VTI1B-205ENST00000555543 DCAF16Q9NXF7 216 aa17.38■□□□□ 0.37
VTI1B-205ENST00000555543 KCNS2Q9ULS6 477 aa17.38■□□□□ 0.37
VTI1B-205ENST00000555543 DNHD1Q96M86 4753 aa17.38■□□□□ 0.37
VTI1B-205ENST00000555543 ATRQ13535 2644 aa17.37■□□□□ 0.37
VTI1B-205ENST00000555543 DEAF1O75398 565 aaPredicted RBP17.37■□□□□ 0.37
VTI1B-205ENST00000555543 TNFAIP6P98066 277 aaPredicted RBP17.37■□□□□ 0.37
VTI1B-205ENST00000555543 CDK5Q00535 292 aa17.37■□□□□ 0.37
VTI1B-205ENST00000555543 MVKQ03426 396 aa17.37■□□□□ 0.37
VTI1B-205ENST00000555543 ZSCAN26Q16670 478 aa17.37■□□□□ 0.37
VTI1B-205ENST00000555543 HFEQ30201 348 aa17.37■□□□□ 0.37
VTI1B-205ENST00000555543 CHRFAM7AQ494W8 412 aa17.37■□□□□ 0.37
VTI1B-205ENST00000555543 IL17RELQ6ZVW7 336 aa17.37■□□□□ 0.37
VTI1B-205ENST00000555543 OR2Z1Q8NG97 314 aa17.37■□□□□ 0.37
VTI1B-205ENST00000555543 CCL17Q92583 94 aa17.37■□□□□ 0.37
VTI1B-205ENST00000555543 OTULINQ96BN8 352 aa17.37■□□□□ 0.37
VTI1B-205ENST00000555543 WIPI2Q9Y4P8 454 aa17.37■□□□□ 0.37
VTI1B-205ENST00000555543 MXRA5Q9NR99 2828 aa17.37■□□□□ 0.37
VTI1B-205ENST00000555543 C5orf63A6NC05 138 aa17.36■□□□□ 0.37
VTI1B-205ENST00000555543 FAM157AC9JC47 383 aa17.36■□□□□ 0.37
VTI1B-205ENST00000555543 CLDN25C9JDP6 229 aa17.36■□□□□ 0.37
VTI1B-205ENST00000555543 M0R135 149 aa17.36■□□□□ 0.37
VTI1B-205ENST00000555543 ZNF593O00488 134 aaPredicted RBP17.36■□□□□ 0.37
VTI1B-205ENST00000555543 SURF4O15260 269 aa17.36■□□□□ 0.37
VTI1B-205ENST00000555543 OTX1P32242 354 aaPredicted RBP17.36■□□□□ 0.37
VTI1B-205ENST00000555543 TPTEP56180 551 aa17.36■□□□□ 0.37
VTI1B-205ENST00000555543 LMO4P61968 165 aa17.36■□□□□ 0.37
VTI1B-205ENST00000555543 TEX30Q5JUR7 227 aa17.36■□□□□ 0.37
VTI1B-205ENST00000555543 C1orf146Q5VVC0 180 aa17.36■□□□□ 0.37
VTI1B-205ENST00000555543 TMEM236Q5W0B7 351 aa17.36■□□□□ 0.37
VTI1B-205ENST00000555543 FAHD1Q6P587 224 aa17.36■□□□□ 0.37
VTI1B-205ENST00000555543 LINC01356Q8N9X3 169 aa17.36■□□□□ 0.37
VTI1B-205ENST00000555543 BHLHE23Q8NDY6 225 aa17.36■□□□□ 0.37
VTI1B-205ENST00000555543 ST7LQ8TDW4 575 aa17.36■□□□□ 0.37
VTI1B-205ENST00000555543 SLAMF6Q96DU3 332 aa17.36■□□□□ 0.37
VTI1B-205ENST00000555543 ZNF799Q96GE5 643 aa17.36■□□□□ 0.37
VTI1B-205ENST00000555543 MMADHCQ9H3L0 296 aaPredicted RBP17.36■□□□□ 0.37
VTI1B-205ENST00000555543 CDC42EP3Q9UKI2 254 aa17.36■□□□□ 0.37
VTI1B-205ENST00000555543 FBN1P35555 2871 aaKnown RBP17.36■□□□□ 0.37
VTI1B-205ENST00000555543 LCATP04180 440 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms