RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 ERV3-1Q14264 604 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 ATXN7L3Q14CW9 347 aaPredicted RBP9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 ALG10Q5BKT4 473 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 C1orf100Q5SVJ3 147 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 TMEM225Q6GV28 225 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 DBX2Q6ZNG2 339 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 SYT13Q7L8C5 426 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 ZNF627Q7L945 461 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 NKAIN3Q8N8D7 197 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 DTWD2Q8NBA8 298 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 OR6N2Q8NGY6 317 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 OTOSQ8NHW6 89 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 RNF128Q8TEB7 428 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 AQP3Q92482 292 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 DCUN1D4Q92564 292 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 TMEM41AQ96HV5 264 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 AQP10Q96PS8 301 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 RAB33BQ9H082 229 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 CST11Q9H112 138 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 CSAG2Q9Y5P2 127 aa9.59□□□□□ -0.87
MTHFD1-210ENST00000555252 REV3LO60673 3130 aa9.58□□□□□ -0.88
MTHFD1-210ENST00000555252 A0A087WV48 116 aa9.58□□□□□ -0.88
MTHFD1-210ENST00000555252 A0A1W2PPC1 479 aa9.58□□□□□ -0.88
MTHFD1-210ENST00000555252 ZNF705EA8MWA4 302 aaPredicted RBP9.58□□□□□ -0.88
MTHFD1-210ENST00000555252 C17orf105B2RV13 164 aa9.58□□□□□ -0.88
MTHFD1-210ENST00000555252 RNASEK-C17orf49H0YIS7 233 aa9.58□□□□□ -0.88
MTHFD1-210ENST00000555252 CCSO14618 274 aa9.58□□□□□ -0.88
MTHFD1-210ENST00000555252 TO15178 435 aa9.58□□□□□ -0.88
MTHFD1-210ENST00000555252 ZNF264O43296 627 aa9.58□□□□□ -0.88
MTHFD1-210ENST00000555252 FBXO24O75426 580 aa9.58□□□□□ -0.88
MTHFD1-210ENST00000555252 PET100P0DJ07 73 aa9.58□□□□□ -0.88
MTHFD1-210ENST00000555252 NME1P15531 152 aaKnown RBP9.58□□□□□ -0.88
MTHFD1-210ENST00000555252 CTXN1P60606 82 aa9.58□□□□□ -0.88
MTHFD1-210ENST00000555252 DCAF7P61962 342 aa9.58□□□□□ -0.88
MTHFD1-210ENST00000555252 SKP2Q13309 424 aa9.58□□□□□ -0.88
MTHFD1-210ENST00000555252 SLC17A1Q14916 467 aa9.58□□□□□ -0.88
MTHFD1-210ENST00000555252 COL19A1Q14993 1142 aa9.58□□□□□ -0.88
MTHFD1-210ENST00000555252 SCGB2B2Q4G0G5 96 aa9.58□□□□□ -0.88
MTHFD1-210ENST00000555252 PRSS54Q6PEW0 395 aa9.58□□□□□ -0.88
MTHFD1-210ENST00000555252 MAMDC2Q7Z304 686 aaPredicted RBP9.58□□□□□ -0.88
MTHFD1-210ENST00000555252 ANGPTL5Q86XS5 388 aa9.58□□□□□ -0.88
MTHFD1-210ENST00000555252 BOLLQ8N9W6 283 aaKnown RBP9.58□□□□□ -0.88
MTHFD1-210ENST00000555252 OR10AC1Q8NH08 325 aa9.58□□□□□ -0.88
MTHFD1-210ENST00000555252 MALSU1Q96EH3 234 aa9.58□□□□□ -0.88
MTHFD1-210ENST00000555252 GAS2L1Q99501 681 aaPredicted RBP9.58□□□□□ -0.88
MTHFD1-210ENST00000555252 PRMT8Q9NR22 394 aaPredicted RBP9.58□□□□□ -0.88
MTHFD1-210ENST00000555252 SOHLH2Q9NX45 425 aa9.58□□□□□ -0.88
MTHFD1-210ENST00000555252 KLK13Q9UKR3 277 aa9.58□□□□□ -0.88
MTHFD1-210ENST00000555252 DHDHQ9UQ10 334 aa9.58□□□□□ -0.88
MTHFD1-210ENST00000555252 CACNA1IQ9P0X4 2223 aa9.57□□□□□ -0.88
MTHFD1-210ENST00000555252 TRAV20A0A0B4J274 112 aa9.57□□□□□ -0.88
MTHFD1-210ENST00000555252 FRG2CA6NGY1 282 aa9.57□□□□□ -0.88
MTHFD1-210ENST00000555252 SHISA7A6NL88 538 aa9.57□□□□□ -0.88
MTHFD1-210ENST00000555252 C2CD4DB7Z1M9 353 aa9.57□□□□□ -0.88
MTHFD1-210ENST00000555252 TMEM150CB9EJG8 249 aa9.57□□□□□ -0.88
MTHFD1-210ENST00000555252 EFSO43281 561 aa9.57□□□□□ -0.88
MTHFD1-210ENST00000555252 STK17BO94768 372 aa9.57□□□□□ -0.88
MTHFD1-210ENST00000555252 CD1CP29017 333 aa9.57□□□□□ -0.88
MTHFD1-210ENST00000555252 HAAOP46952 286 aa9.57□□□□□ -0.88
MTHFD1-210ENST00000555252 SRSF3P84103 164 aaKnown RBP9.57□□□□□ -0.88
MTHFD1-210ENST00000555252 ROM1Q03395 351 aa9.57□□□□□ -0.88
MTHFD1-210ENST00000555252 NNATQ16517 81 aa9.57□□□□□ -0.88
MTHFD1-210ENST00000555252 OR10K2Q6IF99 312 aa9.57□□□□□ -0.88
MTHFD1-210ENST00000555252 C17orf82Q86X59 251 aaPredicted RBP9.57□□□□□ -0.88
MTHFD1-210ENST00000555252 ZNF679Q8IYX0 411 aa9.57□□□□□ -0.88
MTHFD1-210ENST00000555252 CARFQ8N187 725 aa9.57□□□□□ -0.88
MTHFD1-210ENST00000555252 COMMD1Q8N668 190 aa9.57□□□□□ -0.88
MTHFD1-210ENST00000555252 C10orf53Q8N6V4 93 aa9.57□□□□□ -0.88
MTHFD1-210ENST00000555252 FRMD1Q8N878 549 aa9.57□□□□□ -0.88
MTHFD1-210ENST00000555252 OR51A4Q8NGJ6 313 aa9.57□□□□□ -0.88
MTHFD1-210ENST00000555252 PHOSPHO1Q8TCT1 267 aa9.57□□□□□ -0.88
MTHFD1-210ENST00000555252 TCTEX1D2Q8WW35 142 aa9.57□□□□□ -0.88
MTHFD1-210ENST00000555252 TMED6Q8WW62 240 aa9.57□□□□□ -0.88
MTHFD1-210ENST00000555252 INTS12Q96CB8 462 aaKnown RBP9.57□□□□□ -0.88
MTHFD1-210ENST00000555252 MVB12AQ96EY5 273 aa9.57□□□□□ -0.88
MTHFD1-210ENST00000555252 ZDHHC12Q96GR4 267 aa9.57□□□□□ -0.88
MTHFD1-210ENST00000555252 LAT2Q9GZY6 243 aa9.57□□□□□ -0.88
MTHFD1-210ENST00000555252 SYT4Q9H2B2 425 aa9.57□□□□□ -0.88
MTHFD1-210ENST00000555252 RAB18Q9NP72 206 aa9.57□□□□□ -0.88
MTHFD1-210ENST00000555252 NIT2Q9NQR4 276 aa9.57□□□□□ -0.88
MTHFD1-210ENST00000555252 PARP11Q9NR21 331 aa9.57□□□□□ -0.88
MTHFD1-210ENST00000555252 GRHPRQ9UBQ7 328 aa9.57□□□□□ -0.88
MTHFD1-210ENST00000555252 RAB22AQ9UL26 194 aa9.57□□□□□ -0.88
MTHFD1-210ENST00000555252 TIMM10BQ9Y5J6 103 aa9.57□□□□□ -0.88
MTHFD1-210ENST00000555252 SPTBP11277 2137 aa9.57□□□□□ -0.88
MTHFD1-210ENST00000555252 ARHGEF17Q96PE2 2063 aaPredicted RBP9.57□□□□□ -0.88
MTHFD1-210ENST00000555252 CPED1A4D0V7 1026 aa9.57□□□□□ -0.88
MTHFD1-210ENST00000555252 CEACAM18A8MTB9 384 aa9.57□□□□□ -0.88
MTHFD1-210ENST00000555252 HTR3BO95264 441 aa9.57□□□□□ -0.88
MTHFD1-210ENST00000555252 UTS2O95399 124 aa9.57□□□□□ -0.88
MTHFD1-210ENST00000555252 IGHV2-70P01814 119 aa9.57□□□□□ -0.88
MTHFD1-210ENST00000555252 FBP1P09467 338 aa9.57□□□□□ -0.88
MTHFD1-210ENST00000555252 SFTA3P0C7M3 94 aa9.57□□□□□ -0.88
MTHFD1-210ENST00000555252 ASAH2BP0C7U1 165 aa9.57□□□□□ -0.88
MTHFD1-210ENST00000555252 PRF1P14222 555 aa9.57□□□□□ -0.88
MTHFD1-210ENST00000555252 MUC1P15941 1255 aaPredicted RBP9.57□□□□□ -0.88
MTHFD1-210ENST00000555252 CD27P26842 260 aa9.57□□□□□ -0.88
MTHFD1-210ENST00000555252 AQP2P41181 271 aa9.57□□□□□ -0.88
MTHFD1-210ENST00000555252 DVL1P1P54792 670 aaPredicted RBP9.57□□□□□ -0.88
MTHFD1-210ENST00000555252 SLC37A1P57057 533 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms