RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 APLNRP35414 380 aa9.47□□□□□ -0.89
SHMT2-218ENST00000555213 CRYBB2P43320 205 aa9.47□□□□□ -0.89
SHMT2-218ENST00000555213 TMBIM6P55061 237 aa9.47□□□□□ -0.89
SHMT2-218ENST00000555213 ADAM8P78325 824 aa9.47□□□□□ -0.89
SHMT2-218ENST00000555213 GALK2Q01415 458 aa9.47□□□□□ -0.89
SHMT2-218ENST00000555213 MLLT11Q13015 90 aaPredicted RBP9.47□□□□□ -0.89
SHMT2-218ENST00000555213 ENDOGQ14249 297 aaKnown RBP9.47□□□□□ -0.89
SHMT2-218ENST00000555213 TSTQ16762 297 aaKnown RBP9.47□□□□□ -0.89
SHMT2-218ENST00000555213 TBC1D28Q2M2D7 210 aa9.47□□□□□ -0.89
SHMT2-218ENST00000555213 CNPY1Q3B7I2 92 aa9.47□□□□□ -0.89
SHMT2-218ENST00000555213 PABPC1L2AQ5JQF8 200 aa9.47□□□□□ -0.89
SHMT2-218ENST00000555213 VASH1Q7L8A9 365 aaPredicted RBP9.47□□□□□ -0.89
SHMT2-218ENST00000555213 DPY19L4Q7Z388 723 aa9.47□□□□□ -0.89
SHMT2-218ENST00000555213 KLBQ86Z14 1044 aa9.47□□□□□ -0.89
SHMT2-218ENST00000555213 ERI1Q8IV48 349 aaKnown RBP9.47□□□□□ -0.89
SHMT2-218ENST00000555213 PHC2Q8IXK0 858 aa9.47□□□□□ -0.89
SHMT2-218ENST00000555213 KLHL36Q8N4N3 616 aa9.47□□□□□ -0.89
SHMT2-218ENST00000555213 SLC30A7Q8NEW0 376 aa9.47□□□□□ -0.89
SHMT2-218ENST00000555213 OTOSQ8NHW6 89 aa9.47□□□□□ -0.89
SHMT2-218ENST00000555213 RPL3LQ92901 407 aaKnown RBP9.47□□□□□ -0.89
SHMT2-218ENST00000555213 C12orf43Q96C57 262 aaKnown RBP9.47□□□□□ -0.89
SHMT2-218ENST00000555213 ISOC1Q96CN7 298 aa9.47□□□□□ -0.89
SHMT2-218ENST00000555213 HS3ST6Q96QI5 342 aa9.47□□□□□ -0.89
SHMT2-218ENST00000555213 INTS14Q96SY0 518 aa9.47□□□□□ -0.89
SHMT2-218ENST00000555213 OR2H1Q9GZK4 316 aa9.47□□□□□ -0.89
SHMT2-218ENST00000555213 CDH20Q9HBT6 801 aa9.47□□□□□ -0.89
SHMT2-218ENST00000555213 NOX3Q9HBY0 568 aa9.47□□□□□ -0.89
SHMT2-218ENST00000555213 MRM2Q9UI43 246 aaKnown RBP9.47□□□□□ -0.89
SHMT2-218ENST00000555213 ENPP5Q9UJA9 477 aa9.47□□□□□ -0.89
SHMT2-218ENST00000555213 SPEF1Q9Y4P9 236 aa9.47□□□□□ -0.89
SHMT2-218ENST00000555213 ATP6V1G2-DDX39BF2Z307 99 aa9.46□□□□□ -0.9
SHMT2-218ENST00000555213 H3BMQ9 156 aa9.46□□□□□ -0.9
SHMT2-218ENST00000555213 J3QLW9 94 aa9.46□□□□□ -0.9
SHMT2-218ENST00000555213 ZNF701M0R085 212 aaPredicted RBP9.46□□□□□ -0.9
SHMT2-218ENST00000555213 SGCEO43556 437 aa9.46□□□□□ -0.9
SHMT2-218ENST00000555213 DOK2O60496 412 aa9.46□□□□□ -0.9
SHMT2-218ENST00000555213 GPX5O75715 221 aa9.46□□□□□ -0.9
SHMT2-218ENST00000555213 MMP7P09237 267 aaPredicted RBP9.46□□□□□ -0.9
SHMT2-218ENST00000555213 SPARCP09486 303 aa9.46□□□□□ -0.9
SHMT2-218ENST00000555213 PATE4P0C8F1 98 aa9.46□□□□□ -0.9
SHMT2-218ENST00000555213 HSMCR30P0CW71 290 aa9.46□□□□□ -0.9
SHMT2-218ENST00000555213 ZNF14P17017 642 aaPredicted RBP9.46□□□□□ -0.9
SHMT2-218ENST00000555213 ZNF19P17023 458 aa9.46□□□□□ -0.9
SHMT2-218ENST00000555213 GADD45AP24522 165 aa9.46□□□□□ -0.9
SHMT2-218ENST00000555213 PCSK6P29122 969 aa9.46□□□□□ -0.9
SHMT2-218ENST00000555213 ENTPD1P49961 510 aa9.46□□□□□ -0.9
SHMT2-218ENST00000555213 GDI2P50395 445 aaKnown RBP9.46□□□□□ -0.9
SHMT2-218ENST00000555213 ACTC1P68032 377 aa9.46□□□□□ -0.9
SHMT2-218ENST00000555213 ACTA1P68133 377 aa9.46□□□□□ -0.9
SHMT2-218ENST00000555213 NAAAQ02083 359 aa9.46□□□□□ -0.9
SHMT2-218ENST00000555213 RAB35Q15286 201 aa9.46□□□□□ -0.9
SHMT2-218ENST00000555213 TP53I3Q53FA7 332 aa9.46□□□□□ -0.9
SHMT2-218ENST00000555213 UNQ6126/PRO20091Q6UXV3 157 aa9.46□□□□□ -0.9
SHMT2-218ENST00000555213 EGFL6Q8IUX8 553 aa9.46□□□□□ -0.9
SHMT2-218ENST00000555213 SYS1Q8N2H4 156 aa9.46□□□□□ -0.9
SHMT2-218ENST00000555213 ZFP41Q8N8Y5 198 aa9.46□□□□□ -0.9
SHMT2-218ENST00000555213 GJC3Q8NFK1 279 aa9.46□□□□□ -0.9
SHMT2-218ENST00000555213 KBTBD8Q8NFY9 601 aa9.46□□□□□ -0.9
SHMT2-218ENST00000555213 OR10S1Q8NGN2 331 aa9.46□□□□□ -0.9
SHMT2-218ENST00000555213 ZNF420Q8TAQ5 688 aaPredicted RBP9.46□□□□□ -0.9
SHMT2-218ENST00000555213 RPS4Y2Q8TD47 263 aa9.46□□□□□ -0.9
SHMT2-218ENST00000555213 ST7LQ8TDW4 575 aa9.46□□□□□ -0.9
SHMT2-218ENST00000555213 FBXO17Q96EF6 278 aa9.46□□□□□ -0.9
SHMT2-218ENST00000555213 PELI1Q96FA3 418 aa9.46□□□□□ -0.9
SHMT2-218ENST00000555213 TRMT61AQ96FX7 289 aaKnown RBP9.46□□□□□ -0.9
SHMT2-218ENST00000555213 C4orf36Q96KX1 117 aa9.46□□□□□ -0.9
SHMT2-218ENST00000555213 TMEM204Q9BSN7 226 aa9.46□□□□□ -0.9
SHMT2-218ENST00000555213 HDHD2Q9H0R4 259 aa9.46□□□□□ -0.9
SHMT2-218ENST00000555213 OR51E2Q9H255 320 aa9.46□□□□□ -0.9
SHMT2-218ENST00000555213 FAIMQ9NVQ4 179 aa9.46□□□□□ -0.9
SHMT2-218ENST00000555213 CHCHD3Q9NX63 227 aaKnown RBP9.46□□□□□ -0.9
SHMT2-218ENST00000555213 SLCO1C1Q9NYB5 712 aa9.46□□□□□ -0.9
SHMT2-218ENST00000555213 PLEK2Q9NYT0 353 aa9.46□□□□□ -0.9
SHMT2-218ENST00000555213 RSL24D1Q9UHA3 163 aaKnown RBP9.46□□□□□ -0.9
SHMT2-218ENST00000555213 CYB5R1Q9UHQ9 305 aa9.46□□□□□ -0.9
SHMT2-218ENST00000555213 ST6GALNAC2Q9UJ37 374 aa9.46□□□□□ -0.9
SHMT2-218ENST00000555213 UTP20O75691 2785 aaKnown RBP9.45□□□□□ -0.9
SHMT2-218ENST00000555213 IGHV2OR16-5A0A0B4J2B6 119 aa9.45□□□□□ -0.9
SHMT2-218ENST00000555213 PSMD9O00233 223 aa9.45□□□□□ -0.9
SHMT2-218ENST00000555213 CCRL2O00421 344 aa9.45□□□□□ -0.9
SHMT2-218ENST00000555213 HS3ST1O14792 307 aa9.45□□□□□ -0.9
SHMT2-218ENST00000555213 MYL12BO14950 172 aa9.45□□□□□ -0.9
SHMT2-218ENST00000555213 GABARAPO95166 117 aa9.45□□□□□ -0.9
SHMT2-218ENST00000555213 CELA3BP08861 270 aa9.45□□□□□ -0.9
SHMT2-218ENST00000555213 STOMP27105 288 aa9.45□□□□□ -0.9
SHMT2-218ENST00000555213 LOXP28300 417 aaPredicted RBP9.45□□□□□ -0.9
SHMT2-218ENST00000555213 TGFBR1P36897 503 aa9.45□□□□□ -0.9
SHMT2-218ENST00000555213 HTR5AP47898 357 aa9.45□□□□□ -0.9
SHMT2-218ENST00000555213 RPS23P62266 143 aaKnown RBP9.45□□□□□ -0.9
SHMT2-218ENST00000555213 HIST1H3AP68431 136 aa9.45□□□□□ -0.9
SHMT2-218ENST00000555213 PSG4Q00888 419 aa9.45□□□□□ -0.9
SHMT2-218ENST00000555213 BDH1Q02338 343 aa9.45□□□□□ -0.9
SHMT2-218ENST00000555213 ROM1Q03395 351 aa9.45□□□□□ -0.9
SHMT2-218ENST00000555213 SPOCK1Q08629 439 aa9.45□□□□□ -0.9
SHMT2-218ENST00000555213 GPR50Q13585 617 aa9.45□□□□□ -0.9
SHMT2-218ENST00000555213 ZNF672Q499Z4 452 aaPredicted RBP9.45□□□□□ -0.9
SHMT2-218ENST00000555213 HIST2H3PS2Q5TEC6 136 aa9.45□□□□□ -0.9
SHMT2-218ENST00000555213 LIPKQ5VXJ0 399 aa9.45□□□□□ -0.9
SHMT2-218ENST00000555213 DMKNQ6E0U4 476 aaPredicted RBP9.45□□□□□ -0.9
SHMT2-218ENST00000555213 ARL9Q6T311 187 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms