RNA–Protein interactions for RNA: ENST00000555052.1

ARHGEF40-205, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 3

Gene ARHGEF40, Length 935 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-205ENST00000555052 COX10Q12887 443 aa13.12□□□□□ -0.31
ARHGEF40-205ENST00000555052 BAMBIQ13145 260 aa13.12□□□□□ -0.31
ARHGEF40-205ENST00000555052 MEP1BQ16820 701 aa13.12□□□□□ -0.31
ARHGEF40-205ENST00000555052 FGD3Q5JSP0 725 aa13.12□□□□□ -0.31
ARHGEF40-205ENST00000555052 PGM2L1Q6PCE3 622 aa13.12□□□□□ -0.31
ARHGEF40-205ENST00000555052 HACD2Q6Y1H2 254 aa13.12□□□□□ -0.31
ARHGEF40-205ENST00000555052 COLCA1Q6ZS62 124 aa13.12□□□□□ -0.31
ARHGEF40-205ENST00000555052 KLBQ86Z14 1044 aa13.12□□□□□ -0.31
ARHGEF40-205ENST00000555052 PARP8Q8N3A8 854 aa13.12□□□□□ -0.31
ARHGEF40-205ENST00000555052 GJC3Q8NFK1 279 aa13.12□□□□□ -0.31
ARHGEF40-205ENST00000555052 ZNF582Q96NG8 517 aaPredicted RBP13.12□□□□□ -0.31
ARHGEF40-205ENST00000555052 TSSK2Q96PF2 358 aa13.12□□□□□ -0.31
ARHGEF40-205ENST00000555052 FUZQ9BT04 418 aa13.12□□□□□ -0.31
ARHGEF40-205ENST00000555052 POLR1DQ9Y2S0 133 aa13.12□□□□□ -0.31
ARHGEF40-205ENST00000555052 KCNAB3O43448 404 aa13.11□□□□□ -0.31
ARHGEF40-205ENST00000555052 ZNF205O95201 554 aa13.11□□□□□ -0.31
ARHGEF40-205ENST00000555052 PLATP00750 562 aa13.11□□□□□ -0.31
ARHGEF40-205ENST00000555052 RHCEP18577 417 aa13.11□□□□□ -0.31
ARHGEF40-205ENST00000555052 CRABP1P29762 137 aa13.11□□□□□ -0.31
ARHGEF40-205ENST00000555052 PMELP40967 661 aa13.11□□□□□ -0.31
ARHGEF40-205ENST00000555052 GATA4P43694 442 aa13.11□□□□□ -0.31
ARHGEF40-205ENST00000555052 SRP9P49458 86 aaKnown RBP13.11□□□□□ -0.31
ARHGEF40-205ENST00000555052 SLC9A3R2Q15599 337 aa13.11□□□□□ -0.31
ARHGEF40-205ENST00000555052 ZNF404Q494X3 552 aa13.11□□□□□ -0.31
ARHGEF40-205ENST00000555052 LRRN1Q6UXK5 716 aa13.11□□□□□ -0.31
ARHGEF40-205ENST00000555052 MOGAT3Q86VF5 341 aa13.11□□□□□ -0.31
ARHGEF40-205ENST00000555052 OR52E2Q8NGJ4 325 aa13.11□□□□□ -0.31
ARHGEF40-205ENST00000555052 FAM162AQ96A26 154 aa13.11□□□□□ -0.31
ARHGEF40-205ENST00000555052 KCTD14Q9BQ13 255 aaPredicted RBP13.11□□□□□ -0.31
ARHGEF40-205ENST00000555052 TMEM246Q9BRR3 403 aa13.11□□□□□ -0.31
ARHGEF40-205ENST00000555052 MS4A7Q9GZW8 240 aaPredicted RBP13.11□□□□□ -0.31
ARHGEF40-205ENST00000555052 MIOXQ9UGB7 285 aa13.11□□□□□ -0.31
ARHGEF40-205ENST00000555052 SOX21Q9Y651 276 aaPredicted RBP13.11□□□□□ -0.31
ARHGEF40-205ENST00000555052 UNC119BA6NIH7 251 aa13.1□□□□□ -0.31
ARHGEF40-205ENST00000555052 F5H5P2 479 aa13.1□□□□□ -0.31
ARHGEF40-205ENST00000555052 NDUFAB1O14561 156 aa13.1□□□□□ -0.31
ARHGEF40-205ENST00000555052 RPS6KA3P51812 740 aa13.1□□□□□ -0.31
ARHGEF40-205ENST00000555052 LEG1Q6P5S2 330 aa13.1□□□□□ -0.31
ARHGEF40-205ENST00000555052 DNM1P34Q6PK57 102 aa13.1□□□□□ -0.31
ARHGEF40-205ENST00000555052 CORO6Q6QEF8 472 aa13.1□□□□□ -0.31
ARHGEF40-205ENST00000555052 SMARCD3Q6STE5 483 aa13.1□□□□□ -0.31
ARHGEF40-205ENST00000555052 FAM86B1Q8N7N1 296 aa13.1□□□□□ -0.31
ARHGEF40-205ENST00000555052 BHLHE23Q8NDY6 225 aa13.1□□□□□ -0.31
ARHGEF40-205ENST00000555052 SLC26A10Q8NG04 563 aa13.1□□□□□ -0.31
ARHGEF40-205ENST00000555052 RAB40AQ8WXH6 277 aa13.1□□□□□ -0.31
ARHGEF40-205ENST00000555052 SLC25A28Q96A46 364 aa13.1□□□□□ -0.31
ARHGEF40-205ENST00000555052 NEIL1Q96FI4 390 aaPredicted RBP13.1□□□□□ -0.31
ARHGEF40-205ENST00000555052 WDR76Q9H967 626 aa13.1□□□□□ -0.31
ARHGEF40-205ENST00000555052 UNKLQ9H9P5 680 aaKnown RBP13.1□□□□□ -0.31
ARHGEF40-205ENST00000555052 EFCAB1Q9HAE3 211 aa13.1□□□□□ -0.31
ARHGEF40-205ENST00000555052 RPS6KA6Q9UK32 745 aa13.1□□□□□ -0.31
ARHGEF40-205ENST00000555052 B9D1Q9UPM9 204 aa13.1□□□□□ -0.31
ARHGEF40-205ENST00000555052 IGHV3OR16-10A0A075B7F0 116 aa13.09□□□□□ -0.31
ARHGEF40-205ENST00000555052 IGHV3-64DA0A0J9YX35 117 aa13.09□□□□□ -0.31
ARHGEF40-205ENST00000555052 PPP1R3DO95685 299 aa13.09□□□□□ -0.31
ARHGEF40-205ENST00000555052 ACSM4P0C7M7 580 aa13.09□□□□□ -0.31
ARHGEF40-205ENST00000555052 SELEP16581 610 aa13.09□□□□□ -0.31
ARHGEF40-205ENST00000555052 MTNR1AP48039 350 aa13.09□□□□□ -0.31
ARHGEF40-205ENST00000555052 NUDT2P50583 147 aa13.09□□□□□ -0.31
ARHGEF40-205ENST00000555052 GNB2P62879 340 aa13.09□□□□□ -0.31
ARHGEF40-205ENST00000555052 IL13RA1P78552 427 aa13.09□□□□□ -0.31
ARHGEF40-205ENST00000555052 DBPQ10586 325 aaPredicted RBP13.09□□□□□ -0.31
ARHGEF40-205ENST00000555052 FAM201AQ5SY85 155 aa13.09□□□□□ -0.31
ARHGEF40-205ENST00000555052 SLC18B1Q6NT16 456 aa13.09□□□□□ -0.31
ARHGEF40-205ENST00000555052 BTNL3Q6UXE8 466 aa13.09□□□□□ -0.31
ARHGEF40-205ENST00000555052 CFAP77Q6ZQR2 320 aa13.09□□□□□ -0.31
ARHGEF40-205ENST00000555052 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.09□□□□□ -0.31
ARHGEF40-205ENST00000555052 OR6V1Q8N148 313 aa13.09□□□□□ -0.31
ARHGEF40-205ENST00000555052 Q8TCH9 128 aa13.09□□□□□ -0.31
ARHGEF40-205ENST00000555052 DCAF13Q9NV06 445 aaKnown RBP13.09□□□□□ -0.31
ARHGEF40-205ENST00000555052 AURKCQ9UQB9 309 aa13.09□□□□□ -0.31
ARHGEF40-205ENST00000555052 FAM32AQ9Y421 112 aaKnown RBP13.09□□□□□ -0.31
ARHGEF40-205ENST00000555052 TRAV40A0A0B4J280 105 aa13.08□□□□□ -0.32
ARHGEF40-205ENST00000555052 KIR2DS1A0A191URI9 304 aa13.08□□□□□ -0.32
ARHGEF40-205ENST00000555052 LRRC30A6NM36 301 aa13.08□□□□□ -0.32
ARHGEF40-205ENST00000555052 ARPC3O15145 178 aa13.08□□□□□ -0.32
ARHGEF40-205ENST00000555052 DIRAS1O95057 198 aa13.08□□□□□ -0.32
ARHGEF40-205ENST00000555052 HLA-DPB1P04440 258 aa13.08□□□□□ -0.32
ARHGEF40-205ENST00000555052 PITPNBP48739 271 aa13.08□□□□□ -0.32
ARHGEF40-205ENST00000555052 RAD23AP54725 363 aa13.08□□□□□ -0.32
ARHGEF40-205ENST00000555052 PRSS12P56730 875 aa13.08□□□□□ -0.32
ARHGEF40-205ENST00000555052 PSME3P61289 254 aa13.08□□□□□ -0.32
ARHGEF40-205ENST00000555052 MAB21L1Q13394 359 aa13.08□□□□□ -0.32
ARHGEF40-205ENST00000555052 GK2Q14410 553 aaPredicted RBP13.08□□□□□ -0.32
ARHGEF40-205ENST00000555052 ZBTB46Q86UZ6 589 aa13.08□□□□□ -0.32
ARHGEF40-205ENST00000555052 JAZF1Q86VZ6 243 aa13.08□□□□□ -0.32
ARHGEF40-205ENST00000555052 C1orf87Q8N0U7 546 aa13.08□□□□□ -0.32
ARHGEF40-205ENST00000555052 FITM2Q8N6M3 262 aa13.08□□□□□ -0.32
ARHGEF40-205ENST00000555052 CELF2-AS1Q8N7Q2 184 aa13.08□□□□□ -0.32
ARHGEF40-205ENST00000555052 OR8B3Q8NGG8 313 aa13.08□□□□□ -0.32
ARHGEF40-205ENST00000555052 OR52J3Q8NH60 311 aa13.08□□□□□ -0.32
ARHGEF40-205ENST00000555052 FANK1Q8TC84 345 aa13.08□□□□□ -0.32
ARHGEF40-205ENST00000555052 TAF15Q92804 592 aaKnown RBP eCLIP13.08□□□□□ -0.32
ARHGEF40-205ENST00000555052 PLEKHA8Q96JA3 519 aa13.08□□□□□ -0.32
ARHGEF40-205ENST00000555052 ERMAPQ96PL5 475 aaPredicted RBP13.08□□□□□ -0.32
ARHGEF40-205ENST00000555052 OR8B2Q96RD0 313 aa13.08□□□□□ -0.32
ARHGEF40-205ENST00000555052 NMNAT3Q96T66 252 aa13.08□□□□□ -0.32
ARHGEF40-205ENST00000555052 HCAR1Q9BXC0 346 aa13.08□□□□□ -0.32
ARHGEF40-205ENST00000555052 PRDM13Q9H4Q3 707 aa13.08□□□□□ -0.32
ARHGEF40-205ENST00000555052 KRCC1Q9NPI7 259 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms