RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 SATL1Q86VE3 508 aa9.05□□□□□ -0.96
SHMT2-215ENST00000554656 CPOQ8IVL8 374 aa9.05□□□□□ -0.96
SHMT2-215ENST00000554656 SKA3Q8IX90 412 aa9.05□□□□□ -0.96
SHMT2-215ENST00000554656 LRRC17Q8N6Y2 441 aa9.05□□□□□ -0.96
SHMT2-215ENST00000554656 OR13F1Q8NGS4 319 aa9.05□□□□□ -0.96
SHMT2-215ENST00000554656 OR6N1Q8NGY5 312 aa9.05□□□□□ -0.96
SHMT2-215ENST00000554656 CLDND2Q8NHS1 167 aa9.05□□□□□ -0.96
SHMT2-215ENST00000554656 ZNF420Q8TAQ5 688 aaPredicted RBP9.05□□□□□ -0.96
SHMT2-215ENST00000554656 SGCDQ92629 289 aa9.05□□□□□ -0.96
SHMT2-215ENST00000554656 RORBQ92753 470 aa9.05□□□□□ -0.96
SHMT2-215ENST00000554656 TMEM54Q969K7 222 aa9.05□□□□□ -0.96
SHMT2-215ENST00000554656 DGCR14Q96DF8 476 aaKnown RBP9.05□□□□□ -0.96
SHMT2-215ENST00000554656 TMEM80Q96HE8 168 aa9.05□□□□□ -0.96
SHMT2-215ENST00000554656 BCL7BQ9BQE9 202 aa9.05□□□□□ -0.96
SHMT2-215ENST00000554656 RBM38Q9H0Z9 239 aaKnown RBP9.05□□□□□ -0.96
SHMT2-215ENST00000554656 NARFLQ9H6Q4 476 aa9.05□□□□□ -0.96
SHMT2-215ENST00000554656 ACOT13Q9NPJ3 140 aa9.05□□□□□ -0.96
SHMT2-215ENST00000554656 B3GAT2Q9NPZ5 323 aa9.05□□□□□ -0.96
SHMT2-215ENST00000554656 HAO2Q9NYQ3 351 aa9.05□□□□□ -0.96
SHMT2-215ENST00000554656 EXOGQ9Y2C4 368 aaKnown RBP9.05□□□□□ -0.96
SHMT2-215ENST00000554656 EXOSC1Q9Y3B2 195 aaKnown RBP9.05□□□□□ -0.96
SHMT2-215ENST00000554656 IER3IP1Q9Y5U9 82 aa9.05□□□□□ -0.96
SHMT2-215ENST00000554656 WNK2Q9Y3S1 2297 aa9.05□□□□□ -0.96
SHMT2-215ENST00000554656 TANC2Q9HCD6 1990 aa9.04□□□□□ -0.96
SHMT2-215ENST00000554656 VSTM5A8MXK1 200 aa9.04□□□□□ -0.96
SHMT2-215ENST00000554656 BLOC1S5-TXNDC5H3BN57 136 aa9.04□□□□□ -0.96
SHMT2-215ENST00000554656 RAB36O95755 333 aa9.04□□□□□ -0.96
SHMT2-215ENST00000554656 FADS2O95864 444 aaKnown RBP9.04□□□□□ -0.96
SHMT2-215ENST00000554656 ADORA3P0DMS8 318 aa9.04□□□□□ -0.96
SHMT2-215ENST00000554656 AHCYP23526 432 aa9.04□□□□□ -0.96
SHMT2-215ENST00000554656 AQP2P41181 271 aa9.04□□□□□ -0.96
SHMT2-215ENST00000554656 CSNK1A1P48729 337 aa9.04□□□□□ -0.96
SHMT2-215ENST00000554656 SLC25A1P53007 311 aa9.04□□□□□ -0.96
SHMT2-215ENST00000554656 CTXN1P60606 82 aa9.04□□□□□ -0.96
SHMT2-215ENST00000554656 RAB1AP62820 205 aa9.04□□□□□ -0.96
SHMT2-215ENST00000554656 POU4F2Q12837 409 aa9.04□□□□□ -0.96
SHMT2-215ENST00000554656 MELKQ14680 651 aa9.04□□□□□ -0.96
SHMT2-215ENST00000554656 NEDD8Q15843 81 aa9.04□□□□□ -0.96
SHMT2-215ENST00000554656 LCN1P1Q5VSP4 162 aa9.04□□□□□ -0.96
SHMT2-215ENST00000554656 FAM205BPQ63HN1 556 aa9.04□□□□□ -0.96
SHMT2-215ENST00000554656 SLC35D2Q76EJ3 337 aa9.04□□□□□ -0.96
SHMT2-215ENST00000554656 MEPCEQ7L2J0 689 aaKnown RBP9.04□□□□□ -0.96
SHMT2-215ENST00000554656 ZNF367Q7RTV3 350 aa9.04□□□□□ -0.96
SHMT2-215ENST00000554656 ADCK1Q86TW2 530 aa9.04□□□□□ -0.96
SHMT2-215ENST00000554656 ALDH16A1Q8IZ83 802 aa9.04□□□□□ -0.96
SHMT2-215ENST00000554656 RFLNBQ8N5W9 214 aa9.04□□□□□ -0.96
SHMT2-215ENST00000554656 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.04□□□□□ -0.96
SHMT2-215ENST00000554656 SLC37A3Q8NCC5 494 aa9.04□□□□□ -0.96
SHMT2-215ENST00000554656 PROKR2Q8NFJ6 384 aa9.04□□□□□ -0.96
SHMT2-215ENST00000554656 MOSPD2Q8NHP6 518 aa9.04□□□□□ -0.96
SHMT2-215ENST00000554656 GTF3AQ92664 365 aaKnown RBP9.04□□□□□ -0.96
SHMT2-215ENST00000554656 LGALS12Q96DT0 336 aa9.04□□□□□ -0.96
SHMT2-215ENST00000554656 TSPAN32Q96QS1 320 aa9.04□□□□□ -0.96
SHMT2-215ENST00000554656 SH3GL3Q99963 347 aa9.04□□□□□ -0.96
SHMT2-215ENST00000554656 NMNAT2Q9BZQ4 307 aa9.04□□□□□ -0.96
SHMT2-215ENST00000554656 AMBNQ9NP70 447 aa9.04□□□□□ -0.96
SHMT2-215ENST00000554656 INIPQ9NRY2 104 aa9.04□□□□□ -0.96
SHMT2-215ENST00000554656 ZNF275Q9NSD4 429 aaPredicted RBP9.04□□□□□ -0.96
SHMT2-215ENST00000554656 TAS2R5Q9NYW4 299 aa9.04□□□□□ -0.96
SHMT2-215ENST00000554656 GLTPQ9NZD2 209 aa9.04□□□□□ -0.96
SHMT2-215ENST00000554656 IL20RAQ9UHF4 553 aa9.04□□□□□ -0.96
SHMT2-215ENST00000554656 ARHGAP32A7KAX9 2087 aa9.04□□□□□ -0.96
SHMT2-215ENST00000554656 ZNF726A6NNF4 738 aa9.03□□□□□ -0.96
SHMT2-215ENST00000554656 HAX1O00165 279 aa9.03□□□□□ -0.96
SHMT2-215ENST00000554656 TCF21O43680 179 aa9.03□□□□□ -0.96
SHMT2-215ENST00000554656 AHCYL1O43865 530 aa9.03□□□□□ -0.96
SHMT2-215ENST00000554656 UBL3O95164 117 aa9.03□□□□□ -0.96
SHMT2-215ENST00000554656 OR6A2O95222 327 aa9.03□□□□□ -0.96
SHMT2-215ENST00000554656 VENTXO95231 258 aa9.03□□□□□ -0.96
SHMT2-215ENST00000554656 SLC2A10O95528 541 aa9.03□□□□□ -0.96
SHMT2-215ENST00000554656 IGHA1P01876 353 aa9.03□□□□□ -0.96
SHMT2-215ENST00000554656 SERPINA5P05154 406 aa9.03□□□□□ -0.96
SHMT2-215ENST00000554656 PGA4P0DJD7 388 aa9.03□□□□□ -0.96
SHMT2-215ENST00000554656 PGA3P0DJD8 388 aa9.03□□□□□ -0.96
SHMT2-215ENST00000554656 NAT2P11245 290 aa9.03□□□□□ -0.96
SHMT2-215ENST00000554656 CCL2P13500 99 aa9.03□□□□□ -0.96
SHMT2-215ENST00000554656 HIST1H1CP16403 213 aaKnown RBP9.03□□□□□ -0.96
SHMT2-215ENST00000554656 ACHEP22303 614 aa9.03□□□□□ -0.96
SHMT2-215ENST00000554656 SLC2A5P22732 501 aa9.03□□□□□ -0.96
SHMT2-215ENST00000554656 C21orf33P30042 268 aaPredicted RBP9.03□□□□□ -0.96
SHMT2-215ENST00000554656 SRP14P37108 136 aaKnown RBP9.03□□□□□ -0.96
SHMT2-215ENST00000554656 GPR6P46095 362 aaPredicted RBP9.03□□□□□ -0.96
SHMT2-215ENST00000554656 CENPAP49450 140 aa9.03□□□□□ -0.96
SHMT2-215ENST00000554656 ERVS71-1P61550 626 aa9.03□□□□□ -0.96
SHMT2-215ENST00000554656 LMO4P61968 165 aa9.03□□□□□ -0.96
SHMT2-215ENST00000554656 RUNX1T1Q06455 604 aa9.03□□□□□ -0.96
SHMT2-215ENST00000554656 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.03□□□□□ -0.96
SHMT2-215ENST00000554656 CRMP1Q14194 572 aa9.03□□□□□ -0.96
SHMT2-215ENST00000554656 ALKBH6Q3KRA9 238 aa9.03□□□□□ -0.96
SHMT2-215ENST00000554656 SLC35F1Q5T1Q4 408 aa9.03□□□□□ -0.96
SHMT2-215ENST00000554656 HDDC2Q7Z4H3 204 aa9.03□□□□□ -0.96
SHMT2-215ENST00000554656 SLC22A24Q8N4F4 322 aa9.03□□□□□ -0.96
SHMT2-215ENST00000554656 SEMA6DQ8NFY4 1073 aa9.03□□□□□ -0.96
SHMT2-215ENST00000554656 OR52I1Q8NGK6 324 aa9.03□□□□□ -0.96
SHMT2-215ENST00000554656 OR6X1Q8NH79 312 aa9.03□□□□□ -0.96
SHMT2-215ENST00000554656 PTP4A1Q93096 173 aa9.03□□□□□ -0.96
SHMT2-215ENST00000554656 RNFT2Q96EX2 444 aa9.03□□□□□ -0.96
SHMT2-215ENST00000554656 DDOQ99489 341 aa9.03□□□□□ -0.96
SHMT2-215ENST00000554656 MND1Q9BWT6 205 aa9.03□□□□□ -0.96
SHMT2-215ENST00000554656 TXNIPQ9H3M7 391 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms