RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 A8MVM7 634 aa4.06□□□□□ -1.76
ATXN3-228ENST00000554592 ZNF99A8MXY4 864 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-228ENST00000554592 TMEM114B3SHH9 223 aa4.06□□□□□ -1.76
ATXN3-228ENST00000554592 TRAPPC2LH3BP13 241 aa4.06□□□□□ -1.76
ATXN3-228ENST00000554592 CFLARO15519 480 aa4.06□□□□□ -1.76
ATXN3-228ENST00000554592 ITM2AO43736 263 aa4.06□□□□□ -1.76
ATXN3-228ENST00000554592 BCAS1O75363 584 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-228ENST00000554592 LYPLA1O75608 230 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-228ENST00000554592 RAB36O95755 333 aa4.06□□□□□ -1.76
ATXN3-228ENST00000554592 C6orf47O95873 294 aa4.06□□□□□ -1.76
ATXN3-228ENST00000554592 HLA-HP01893 362 aa4.06□□□□□ -1.76
ATXN3-228ENST00000554592 SNRPAP09012 282 aaKnown RBP4.06□□□□□ -1.76
ATXN3-228ENST00000554592 TFPTP0C1Z6 253 aa4.06□□□□□ -1.76
ATXN3-228ENST00000554592 PPIAL4GP0DN37 164 aa4.06□□□□□ -1.76
ATXN3-228ENST00000554592 PSG1P11464 419 aa4.06□□□□□ -1.76
ATXN3-228ENST00000554592 CD79AP11912 226 aa4.06□□□□□ -1.76
ATXN3-228ENST00000554592 NEFHP12036 1026 aa4.06□□□□□ -1.76
ATXN3-228ENST00000554592 ZNF12P17014 697 aa4.06□□□□□ -1.76
ATXN3-228ENST00000554592 ZNF14P17017 642 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-228ENST00000554592 ZNF43P17038 809 aa4.06□□□□□ -1.76
ATXN3-228ENST00000554592 P2RY4P51582 365 aa4.06□□□□□ -1.76
ATXN3-228ENST00000554592 RAG2P55895 527 aa4.06□□□□□ -1.76
ATXN3-228ENST00000554592 CLDN17P56750 224 aa4.06□□□□□ -1.76
ATXN3-228ENST00000554592 PAX8Q06710 450 aa4.06□□□□□ -1.76
ATXN3-228ENST00000554592 C1DQ13901 141 aaKnown RBP4.06□□□□□ -1.76
ATXN3-228ENST00000554592 CEACAM16Q2WEN9 425 aa4.06□□□□□ -1.76
ATXN3-228ENST00000554592 LRIF1Q5T3J3 769 aa4.06□□□□□ -1.76
ATXN3-228ENST00000554592 KPRPQ5T749 579 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-228ENST00000554592 ATAD3BQ5T9A4 648 aa4.06□□□□□ -1.76
ATXN3-228ENST00000554592 TYW3Q6IPR3 259 aaKnown RBP4.06□□□□□ -1.76
ATXN3-228ENST00000554592 PQLC2Q6ZP29 291 aa4.06□□□□□ -1.76
ATXN3-228ENST00000554592 CFAP77Q6ZQR2 320 aa4.06□□□□□ -1.76
ATXN3-228ENST00000554592 RNF165Q6ZSG1 346 aa4.06□□□□□ -1.76
ATXN3-228ENST00000554592 OLIG3Q7RTU3 272 aa4.06□□□□□ -1.76
ATXN3-228ENST00000554592 C16orf62Q7Z3J2 963 aa4.06□□□□□ -1.76
ATXN3-228ENST00000554592 OR8H2Q8N162 312 aa4.06□□□□□ -1.76
ATXN3-228ENST00000554592 OR7A2PQ8NGA2 310 aa4.06□□□□□ -1.76
ATXN3-228ENST00000554592 OR52E2Q8NGJ4 325 aa4.06□□□□□ -1.76
ATXN3-228ENST00000554592 SYNPRQ8TBG9 265 aa4.06□□□□□ -1.76
ATXN3-228ENST00000554592 C11orf40Q8WZ69 217 aa4.06□□□□□ -1.76
ATXN3-228ENST00000554592 CCL17Q92583 94 aa4.06□□□□□ -1.76
ATXN3-228ENST00000554592 RRNAD1Q96FB5 475 aaKnown RBP4.06□□□□□ -1.76
ATXN3-228ENST00000554592 PAFAH2Q99487 392 aa4.06□□□□□ -1.76
ATXN3-228ENST00000554592 ADPRHL2Q9NX46 363 aa4.06□□□□□ -1.76
ATXN3-228ENST00000554592 UBAP1Q9NZ09 502 aa4.06□□□□□ -1.76
ATXN3-228ENST00000554592 NINJ2Q9NZG7 142 aa4.06□□□□□ -1.76
ATXN3-228ENST00000554592 OR6C3Q9NZP0 311 aa4.06□□□□□ -1.76
ATXN3-228ENST00000554592 SLC7A8Q9UHI5 535 aa4.06□□□□□ -1.76
ATXN3-228ENST00000554592 KLHL21Q9UJP4 597 aa4.06□□□□□ -1.76
ATXN3-228ENST00000554592 RPS6KA6Q9UK32 745 aa4.06□□□□□ -1.76
ATXN3-228ENST00000554592 FZR1Q9UM11 496 aa4.06□□□□□ -1.76
ATXN3-228ENST00000554592 TMEM5Q9Y2B1 443 aa4.06□□□□□ -1.76
ATXN3-228ENST00000554592 RRP15Q9Y3B9 282 aaKnown RBP4.06□□□□□ -1.76
ATXN3-228ENST00000554592 WDR45Q9Y484 360 aa4.06□□□□□ -1.76
ATXN3-228ENST00000554592 INSIG2Q9Y5U4 225 aa4.06□□□□□ -1.76
ATXN3-228ENST00000554592 KMT2CQ8NEZ4 4911 aaKnown RBP4.06□□□□□ -1.76
ATXN3-228ENST00000554592 WNK1Q9H4A3 2382 aa4.05□□□□□ -1.76
ATXN3-228ENST00000554592 IGLV3-9A0A075B6K5 115 aa4.05□□□□□ -1.76
ATXN3-228ENST00000554592 A0A096LPI6 279 aa4.05□□□□□ -1.76
ATXN3-228ENST00000554592 LOC102725191A0A1B0GVB3 256 aa4.05□□□□□ -1.76
ATXN3-228ENST00000554592 RPS10-NUDT3A0A1W2PQS6 291 aa4.05□□□□□ -1.76
ATXN3-228ENST00000554592 ISPDA4D126 451 aa4.05□□□□□ -1.76
ATXN3-228ENST00000554592 C5orf63A6NC05 138 aa4.05□□□□□ -1.76
ATXN3-228ENST00000554592 CLDN24A6NM45 220 aa4.05□□□□□ -1.76
ATXN3-228ENST00000554592 SRRM5B3KS81 715 aa4.05□□□□□ -1.76
ATXN3-228ENST00000554592 VCYO14598 125 aa4.05□□□□□ -1.76
ATXN3-228ENST00000554592 AZIN1O14977 448 aa4.05□□□□□ -1.76
ATXN3-228ENST00000554592 CLPXO76031 633 aa4.05□□□□□ -1.76
ATXN3-228ENST00000554592 UBL3O95164 117 aa4.05□□□□□ -1.76
ATXN3-228ENST00000554592 CLPTM1O96005 669 aa4.05□□□□□ -1.76
ATXN3-228ENST00000554592 IGHMP01871 453 aa4.05□□□□□ -1.76
ATXN3-228ENST00000554592 SERPINA5P05154 406 aa4.05□□□□□ -1.76
ATXN3-228ENST00000554592 LINC00032P0C843 101 aa4.05□□□□□ -1.76
ATXN3-228ENST00000554592 OR12D1P0DN82 309 aa4.05□□□□□ -1.76
ATXN3-228ENST00000554592 G6PDP11413 515 aa4.05□□□□□ -1.76
ATXN3-228ENST00000554592 ZNF250P15622 560 aa4.05□□□□□ -1.76
ATXN3-228ENST00000554592 PRPS1L1P21108 318 aa4.05□□□□□ -1.76
ATXN3-228ENST00000554592 CAMPP49913 170 aa4.05□□□□□ -1.76
ATXN3-228ENST00000554592 ENTPD1P49961 510 aa4.05□□□□□ -1.76
ATXN3-228ENST00000554592 KLF3P57682 345 aaPredicted RBP4.05□□□□□ -1.76
ATXN3-228ENST00000554592 BPIFB3P59826 476 aa4.05□□□□□ -1.76
ATXN3-228ENST00000554592 DNAJB13P59910 316 aa4.05□□□□□ -1.76
ATXN3-228ENST00000554592 KRTAP10-3P60369 221 aa4.05□□□□□ -1.76
ATXN3-228ENST00000554592 COPZ1P61923 177 aa4.05□□□□□ -1.76
ATXN3-228ENST00000554592 RPL38P63173 70 aaKnown RBP4.05□□□□□ -1.76
ATXN3-228ENST00000554592 HBA1P69905 142 aa4.05□□□□□ -1.76
ATXN3-228ENST00000554592 CAMK2DQ13557 499 aa4.05□□□□□ -1.76
ATXN3-228ENST00000554592 GNA13Q14344 377 aa4.05□□□□□ -1.76
ATXN3-228ENST00000554592 ALKBH6Q3KRA9 238 aa4.05□□□□□ -1.76
ATXN3-228ENST00000554592 ZNF260Q3ZCT1 412 aa4.05□□□□□ -1.76
ATXN3-228ENST00000554592 CFAP157Q5JU67 520 aa4.05□□□□□ -1.76
ATXN3-228ENST00000554592 C1orf140Q5VVS0 124 aa4.05□□□□□ -1.76
ATXN3-228ENST00000554592 FIP1L1Q6UN15 594 aaKnown RBP4.05□□□□□ -1.76
ATXN3-228ENST00000554592 SHFQ7M4L6 423 aa4.05□□□□□ -1.76
ATXN3-228ENST00000554592 SNX32Q86XE0 403 aa4.05□□□□□ -1.76
ATXN3-228ENST00000554592 ZNF440Q8IYI8 595 aa4.05□□□□□ -1.76
ATXN3-228ENST00000554592 KDM8Q8N371 416 aa4.05□□□□□ -1.76
ATXN3-228ENST00000554592 TMEM86BQ8N661 226 aa4.05□□□□□ -1.76
ATXN3-228ENST00000554592 LSMEM1Q8N8F7 131 aa4.05□□□□□ -1.76
ATXN3-228ENST00000554592 NEXN-AS1Q8NBZ9 246 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms