RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 CCL21O00585 134 aa5.5□□□□□ -1.53
SCFD1-212ENST00000554486 SLC16A7O60669 478 aa5.5□□□□□ -1.53
SCFD1-212ENST00000554486 ENTPD6O75354 484 aa5.5□□□□□ -1.53
SCFD1-212ENST00000554486 MRPL33O75394 65 aaKnown RBP5.5□□□□□ -1.53
SCFD1-212ENST00000554486 IGHV3-9P01782 118 aa5.5□□□□□ -1.53
SCFD1-212ENST00000554486 MBPP02686 304 aaPredicted RBP5.5□□□□□ -1.53
SCFD1-212ENST00000554486 GYPBP06028 91 aa5.5□□□□□ -1.53
SCFD1-212ENST00000554486 QDPRP09417 244 aa5.5□□□□□ -1.53
SCFD1-212ENST00000554486 PRR23D2P0DMB1 279 aaPredicted RBP5.5□□□□□ -1.53
SCFD1-212ENST00000554486 NDUFB7P17568 137 aa5.5□□□□□ -1.53
SCFD1-212ENST00000554486 SPI1P17947 270 aa5.5□□□□□ -1.53
SCFD1-212ENST00000554486 PYCR1P32322 319 aa5.5□□□□□ -1.53
SCFD1-212ENST00000554486 CSNK1A1P48729 337 aa5.5□□□□□ -1.53
SCFD1-212ENST00000554486 FOXG1P55316 489 aaPredicted RBP5.5□□□□□ -1.53
SCFD1-212ENST00000554486 ADORA2A-AS1P86434 159 aa5.5□□□□□ -1.53
SCFD1-212ENST00000554486 FMODQ06828 376 aa5.5□□□□□ -1.53
SCFD1-212ENST00000554486 EIF2S3LQ2VIR3 472 aaKnown RBP5.5□□□□□ -1.53
SCFD1-212ENST00000554486 SLC25A30Q5SVS4 291 aa5.5□□□□□ -1.53
SCFD1-212ENST00000554486 THEM4Q5T1C6 240 aa5.5□□□□□ -1.53
SCFD1-212ENST00000554486 LINC01590Q5TEZ4 76 aa5.5□□□□□ -1.53
SCFD1-212ENST00000554486 TMEM211Q6ICI0 200 aa5.5□□□□□ -1.53
SCFD1-212ENST00000554486 B3GLCTQ6Y288 498 aa5.5□□□□□ -1.53
SCFD1-212ENST00000554486 ZNF100Q8IYN0 542 aa5.5□□□□□ -1.53
SCFD1-212ENST00000554486 CNEP1R1Q8N9A8 125 aa5.5□□□□□ -1.53
SCFD1-212ENST00000554486 POMGNT2Q8NAT1 580 aa5.5□□□□□ -1.53
SCFD1-212ENST00000554486 RELL2Q8NC24 303 aaPredicted RBP5.5□□□□□ -1.53
SCFD1-212ENST00000554486 SETD9Q8NE22 299 aa5.5□□□□□ -1.53
SCFD1-212ENST00000554486 OR51L1Q8NGJ5 315 aa5.5□□□□□ -1.53
SCFD1-212ENST00000554486 OR6K3Q8NGY3 331 aa5.5□□□□□ -1.53
SCFD1-212ENST00000554486 OR6N1Q8NGY5 312 aa5.5□□□□□ -1.53
SCFD1-212ENST00000554486 MCHR2Q969V1 340 aa5.5□□□□□ -1.53
SCFD1-212ENST00000554486 APH1AQ96BI3 265 aa5.5□□□□□ -1.53
SCFD1-212ENST00000554486 OTULINQ96BN8 352 aa5.5□□□□□ -1.53
SCFD1-212ENST00000554486 CNBD2Q96M20 576 aa5.5□□□□□ -1.53
SCFD1-212ENST00000554486 ALKBH3Q96Q83 286 aaPredicted RBP5.5□□□□□ -1.53
SCFD1-212ENST00000554486 RBP7Q96R05 134 aa5.5□□□□□ -1.53
SCFD1-212ENST00000554486 SFXN3Q9BWM7 321 aa5.5□□□□□ -1.53
SCFD1-212ENST00000554486 ULBP2Q9BZM5 246 aa5.5□□□□□ -1.53
SCFD1-212ENST00000554486 LINC00470Q9BZP3 86 aa5.5□□□□□ -1.53
SCFD1-212ENST00000554486 NUAK2Q9H093 628 aa5.5□□□□□ -1.53
SCFD1-212ENST00000554486 Q9H521 79 aa5.5□□□□□ -1.53
SCFD1-212ENST00000554486 RPRD1BQ9NQG5 326 aaKnown RBP5.5□□□□□ -1.53
SCFD1-212ENST00000554486 PLSCR4Q9NRQ2 329 aa5.5□□□□□ -1.53
SCFD1-212ENST00000554486 UBAP1Q9NZ09 502 aa5.5□□□□□ -1.53
SCFD1-212ENST00000554486 B9D1Q9UPM9 204 aa5.5□□□□□ -1.53
SCFD1-212ENST00000554486 UGT2A1Q9Y4X1 527 aa5.5□□□□□ -1.53
SCFD1-212ENST00000554486 FKBP7Q9Y680 259 aa5.5□□□□□ -1.53
SCFD1-212ENST00000554486 HSPE1-MOB4S4R3N1 261 aa5.5□□□□□ -1.53
SCFD1-212ENST00000554486 RELNP78509 3460 aa5.5□□□□□ -1.53
SCFD1-212ENST00000554486 USP9XQ93008 2570 aaPredicted RBP5.5□□□□□ -1.53
SCFD1-212ENST00000554486 UBR5O95071 2799 aaPredicted RBP5.5□□□□□ -1.53
SCFD1-212ENST00000554486 OR6C65A6NJZ3 312 aa5.49□□□□□ -1.53
SCFD1-212ENST00000554486 HSPB2A8KAH6 182 aa5.49□□□□□ -1.53
SCFD1-212ENST00000554486 RPL36A-HNRNPH2H7BZ11 118 aa5.49□□□□□ -1.53
SCFD1-212ENST00000554486 PSMD9O00233 223 aa5.49□□□□□ -1.53
SCFD1-212ENST00000554486 MPZL2O60487 215 aa5.49□□□□□ -1.53
SCFD1-212ENST00000554486 KHDRBS3O75525 346 aaKnown RBP5.49□□□□□ -1.53
SCFD1-212ENST00000554486 GLCEO94923 617 aa5.49□□□□□ -1.53
SCFD1-212ENST00000554486 MPZL1O95297 269 aa5.49□□□□□ -1.53
SCFD1-212ENST00000554486 TMEM225BP0DP42 221 aa5.49□□□□□ -1.53
SCFD1-212ENST00000554486 PAICSP22234 425 aaKnown RBP5.49□□□□□ -1.53
SCFD1-212ENST00000554486 CRABP1P29762 137 aa5.49□□□□□ -1.53
SCFD1-212ENST00000554486 HTR1FP30939 366 aa5.49□□□□□ -1.53
SCFD1-212ENST00000554486 FMO3P31513 532 aa5.49□□□□□ -1.53
SCFD1-212ENST00000554486 CDAP32320 146 aa5.49□□□□□ -1.53
SCFD1-212ENST00000554486 NUDT6P53370 316 aa5.49□□□□□ -1.53
SCFD1-212ENST00000554486 CDH11P55287 796 aa5.49□□□□□ -1.53
SCFD1-212ENST00000554486 ROR2Q01974 943 aaKnown RBP5.49□□□□□ -1.53
SCFD1-212ENST00000554486 APOFQ13790 326 aa5.49□□□□□ -1.53
SCFD1-212ENST00000554486 HSPB2Q16082 182 aa5.49□□□□□ -1.53
SCFD1-212ENST00000554486 CEACAM16Q2WEN9 425 aa5.49□□□□□ -1.53
SCFD1-212ENST00000554486 C6orf141Q5SZD1 244 aa5.49□□□□□ -1.53
SCFD1-212ENST00000554486 C10orf128Q5T292 105 aa5.49□□□□□ -1.53
SCFD1-212ENST00000554486 NXNL2Q5VZ03 156 aa5.49□□□□□ -1.53
SCFD1-212ENST00000554486 FBXW9Q5XUX1 488 aa5.49□□□□□ -1.53
SCFD1-212ENST00000554486 ZNF474Q6S9Z5 364 aaPredicted RBP5.49□□□□□ -1.53
SCFD1-212ENST00000554486 FOXL2NBQ6ZUU3 175 aa5.49□□□□□ -1.53
SCFD1-212ENST00000554486 MEPCEQ7L2J0 689 aaKnown RBP5.49□□□□□ -1.53
SCFD1-212ENST00000554486 FJX1Q86VR8 437 aa5.49□□□□□ -1.53
SCFD1-212ENST00000554486 GPR137CQ8N3F9 429 aa5.49□□□□□ -1.53
SCFD1-212ENST00000554486 OR2T4Q8NH00 348 aa5.49□□□□□ -1.53
SCFD1-212ENST00000554486 FNDC8Q8TC99 324 aa5.49□□□□□ -1.53
SCFD1-212ENST00000554486 NSMAFQ92636 917 aa5.49□□□□□ -1.53
SCFD1-212ENST00000554486 RND1Q92730 232 aa5.49□□□□□ -1.53
SCFD1-212ENST00000554486 ZMYND19Q96E35 227 aaPredicted RBP5.49□□□□□ -1.53
SCFD1-212ENST00000554486 FOXN4Q96NZ1 517 aa5.49□□□□□ -1.53
SCFD1-212ENST00000554486 TEAD3Q99594 435 aa5.49□□□□□ -1.53
SCFD1-212ENST00000554486 RACGAP1Q9H0H5 632 aa5.49□□□□□ -1.53
SCFD1-212ENST00000554486 OPN3Q9H1Y3 402 aaPredicted RBP5.49□□□□□ -1.53
SCFD1-212ENST00000554486 OR51V1Q9H2C8 321 aa5.49□□□□□ -1.53
SCFD1-212ENST00000554486 RERGLQ9H628 205 aa5.49□□□□□ -1.53
SCFD1-212ENST00000554486 SAP30LQ9HAJ7 183 aa5.49□□□□□ -1.53
SCFD1-212ENST00000554486 CRLF2Q9HC73 371 aa5.49□□□□□ -1.53
SCFD1-212ENST00000554486 MRPL22Q9NWU5 206 aaKnown RBP5.49□□□□□ -1.53
SCFD1-212ENST00000554486 CLN6Q9NWW5 311 aa5.49□□□□□ -1.53
SCFD1-212ENST00000554486 MALT1Q9UDY8 824 aa5.49□□□□□ -1.53
SCFD1-212ENST00000554486 ZNF629Q9UEG4 869 aaPredicted RBP5.49□□□□□ -1.53
SCFD1-212ENST00000554486 PROCRQ9UNN8 238 aa5.49□□□□□ -1.53
SCFD1-212ENST00000554486 ADGRG4Q8IZF6 3080 aa5.49□□□□□ -1.53
SCFD1-212ENST00000554486 A0A1B0GUH1 482 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms