RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 FGF20Q9NP95 211 aaPredicted RBP12.07□□□□□ -0.48
SPTLC2-202ENST00000554365 TMEM38BQ9NVV0 291 aa12.07□□□□□ -0.48
SPTLC2-202ENST00000554365 CNOT2Q9NZN8 540 aaKnown RBP12.07□□□□□ -0.48
SPTLC2-202ENST00000554365 HEATR1Q9H583 2144 aaKnown RBP12.07□□□□□ -0.48
SPTLC2-202ENST00000554365 A0A1W2PPL8 197 aa12.06□□□□□ -0.48
SPTLC2-202ENST00000554365 EFCAB10A6NFE3 127 aa12.06□□□□□ -0.48
SPTLC2-202ENST00000554365 SNTNA6NMZ2 147 aa12.06□□□□□ -0.48
SPTLC2-202ENST00000554365 ZNF99A8MXY4 864 aaPredicted RBP12.06□□□□□ -0.48
SPTLC2-202ENST00000554365 SEC14L2O76054 403 aa12.06□□□□□ -0.48
SPTLC2-202ENST00000554365 MRPL3P09001 348 aaKnown RBP12.06□□□□□ -0.48
SPTLC2-202ENST00000554365 NAA10P41227 235 aaPredicted RBP12.06□□□□□ -0.48
SPTLC2-202ENST00000554365 CENPAP49450 140 aa12.06□□□□□ -0.48
SPTLC2-202ENST00000554365 ZNF84P51523 738 aa12.06□□□□□ -0.48
SPTLC2-202ENST00000554365 BLVRAP53004 296 aa12.06□□□□□ -0.48
SPTLC2-202ENST00000554365 TUBA1BP68363 451 aa12.06□□□□□ -0.48
SPTLC2-202ENST00000554365 TUBA4AP68366 448 aa12.06□□□□□ -0.48
SPTLC2-202ENST00000554365 ARF1P84077 181 aaKnown RBP12.06□□□□□ -0.48
SPTLC2-202ENST00000554365 PIGFQ07326 219 aa12.06□□□□□ -0.48
SPTLC2-202ENST00000554365 RAB40BQ12829 278 aa12.06□□□□□ -0.48
SPTLC2-202ENST00000554365 ENDOGQ14249 297 aaKnown RBP12.06□□□□□ -0.48
SPTLC2-202ENST00000554365 ADIPOQQ15848 244 aa12.06□□□□□ -0.48
SPTLC2-202ENST00000554365 TBRG1Q3YBR2 411 aa12.06□□□□□ -0.48
SPTLC2-202ENST00000554365 KCTD21Q4G0X4 260 aa12.06□□□□□ -0.48
SPTLC2-202ENST00000554365 AHSA2Q719I0 299 aa12.06□□□□□ -0.48
SPTLC2-202ENST00000554365 TUBA1AQ71U36 451 aa12.06□□□□□ -0.48
SPTLC2-202ENST00000554365 OR1K1Q8NGR3 316 aa12.06□□□□□ -0.48
SPTLC2-202ENST00000554365 CNN2Q99439 309 aaKnown RBP12.06□□□□□ -0.48
SPTLC2-202ENST00000554365 FOXB1Q99853 325 aa12.06□□□□□ -0.48
SPTLC2-202ENST00000554365 ZNF649Q9BS31 505 aa12.06□□□□□ -0.48
SPTLC2-202ENST00000554365 RAB1BQ9H0U4 201 aa12.06□□□□□ -0.48
SPTLC2-202ENST00000554365 ZNF696Q9H7X3 374 aa12.06□□□□□ -0.48
SPTLC2-202ENST00000554365 EMC7Q9NPA0 242 aa12.06□□□□□ -0.48
SPTLC2-202ENST00000554365 OBP2BQ9NPH6 170 aa12.06□□□□□ -0.48
SPTLC2-202ENST00000554365 ERVK-18Q9QC07 812 aa12.06□□□□□ -0.48
SPTLC2-202ENST00000554365 COPS3Q9UNS2 423 aa12.06□□□□□ -0.48
SPTLC2-202ENST00000554365 MYRFQ9Y2G1 1151 aa12.06□□□□□ -0.48
SPTLC2-202ENST00000554365 TPRKBQ9Y3C4 175 aa12.06□□□□□ -0.48
SPTLC2-202ENST00000554365 PTGES3LE9PB15 166 aa12.05□□□□□ -0.48
SPTLC2-202ENST00000554365 TCF21O43680 179 aa12.05□□□□□ -0.48
SPTLC2-202ENST00000554365 IGHA1P01876 353 aa12.05□□□□□ -0.48
SPTLC2-202ENST00000554365 CDK1P06493 297 aa12.05□□□□□ -0.48
SPTLC2-202ENST00000554365 SRP14P37108 136 aaKnown RBP12.05□□□□□ -0.48
SPTLC2-202ENST00000554365 RPS27P42677 84 aaKnown RBP12.05□□□□□ -0.48
SPTLC2-202ENST00000554365 PPOXP50336 477 aa12.05□□□□□ -0.48
SPTLC2-202ENST00000554365 HCCSP53701 268 aa12.05□□□□□ -0.48
SPTLC2-202ENST00000554365 CDH15P55291 814 aa12.05□□□□□ -0.48
SPTLC2-202ENST00000554365 GABARAPL2P60520 117 aa12.05□□□□□ -0.48
SPTLC2-202ENST00000554365 NAAAQ02083 359 aa12.05□□□□□ -0.48
SPTLC2-202ENST00000554365 ST3GAL4Q11206 333 aa12.05□□□□□ -0.48
SPTLC2-202ENST00000554365 TEX30Q5JUR7 227 aa12.05□□□□□ -0.48
SPTLC2-202ENST00000554365 ANKRD16Q6P6B7 361 aa12.05□□□□□ -0.48
SPTLC2-202ENST00000554365 SLC16A9Q7RTY1 509 aa12.05□□□□□ -0.48
SPTLC2-202ENST00000554365 ERI1Q8IV48 349 aaKnown RBP12.05□□□□□ -0.48
SPTLC2-202ENST00000554365 RFLNBQ8N5W9 214 aa12.05□□□□□ -0.48
SPTLC2-202ENST00000554365 BCL2L2Q92843 193 aaPredicted RBP12.05□□□□□ -0.48
SPTLC2-202ENST00000554365 C1orf159Q96HA4 380 aa12.05□□□□□ -0.48
SPTLC2-202ENST00000554365 BOD1Q96IK1 185 aa12.05□□□□□ -0.48
SPTLC2-202ENST00000554365 INTS14Q96SY0 518 aa12.05□□□□□ -0.48
SPTLC2-202ENST00000554365 JAM3Q9BX67 310 aa12.05□□□□□ -0.48
SPTLC2-202ENST00000554365 SEC61A2Q9H9S3 476 aa12.05□□□□□ -0.48
SPTLC2-202ENST00000554365 SCN3BQ9NY72 215 aa12.05□□□□□ -0.48
SPTLC2-202ENST00000554365 ZNF224Q9NZL3 707 aa12.05□□□□□ -0.48
SPTLC2-202ENST00000554365 KLHDC2Q9Y2U9 406 aa12.05□□□□□ -0.48
SPTLC2-202ENST00000554365 ARFGEF3Q5TH69 2177 aa12.05□□□□□ -0.48
SPTLC2-202ENST00000554365 A0A096LPE4 126 aa12.04□□□□□ -0.48
SPTLC2-202ENST00000554365 A0A1W2PPZ6 126 aa12.04□□□□□ -0.48
SPTLC2-202ENST00000554365 PRR32B1ATL7 298 aa12.04□□□□□ -0.48
SPTLC2-202ENST00000554365 ZNF593O00488 134 aaPredicted RBP12.04□□□□□ -0.48
SPTLC2-202ENST00000554365 TNFAIP8O95379 198 aa12.04□□□□□ -0.48
SPTLC2-202ENST00000554365 HLA-DQA2P01906 255 aa12.04□□□□□ -0.48
SPTLC2-202ENST00000554365 LYNP07948 512 aa12.04□□□□□ -0.48
SPTLC2-202ENST00000554365 ERCC1P07992 297 aaPredicted RBP12.04□□□□□ -0.48
SPTLC2-202ENST00000554365 CECR9P0C854 216 aa12.04□□□□□ -0.48
SPTLC2-202ENST00000554365 DAOP14920 347 aa12.04□□□□□ -0.48
SPTLC2-202ENST00000554365 B4GALT1P15291 398 aa12.04□□□□□ -0.48
SPTLC2-202ENST00000554365 MSR1P21757 451 aa12.04□□□□□ -0.48
SPTLC2-202ENST00000554365 APEX1P27695 318 aaKnown RBP12.04□□□□□ -0.48
SPTLC2-202ENST00000554365 C21orf33P30042 268 aaPredicted RBP12.04□□□□□ -0.48
SPTLC2-202ENST00000554365 IL2RGP31785 369 aa12.04□□□□□ -0.48
SPTLC2-202ENST00000554365 ENTPD1P49961 510 aa12.04□□□□□ -0.48
SPTLC2-202ENST00000554365 IDH3GP51553 393 aaPredicted RBP12.04□□□□□ -0.48
SPTLC2-202ENST00000554365 LSM6P62312 80 aaKnown RBP12.04□□□□□ -0.48
SPTLC2-202ENST00000554365 ZNF85Q03923 595 aa12.04□□□□□ -0.48
SPTLC2-202ENST00000554365 POU4F2Q12837 409 aa12.04□□□□□ -0.48
SPTLC2-202ENST00000554365 IRF3Q14653 427 aa12.04□□□□□ -0.48
SPTLC2-202ENST00000554365 EFNB3Q15768 340 aa12.04□□□□□ -0.48
SPTLC2-202ENST00000554365 SGCAQ16586 387 aa12.04□□□□□ -0.48
SPTLC2-202ENST00000554365 NRN1LQ496H8 165 aa12.04□□□□□ -0.48
SPTLC2-202ENST00000554365 KLHL22Q53GT1 634 aa12.04□□□□□ -0.48
SPTLC2-202ENST00000554365 FAM27BQ5VT28 67 aa12.04□□□□□ -0.48
SPTLC2-202ENST00000554365 SSX6Q7RTT6 188 aa12.04□□□□□ -0.48
SPTLC2-202ENST00000554365 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.04□□□□□ -0.48
SPTLC2-202ENST00000554365 SLC35F2Q8IXU6 374 aa12.04□□□□□ -0.48
SPTLC2-202ENST00000554365 SLC22A24Q8N4F4 322 aa12.04□□□□□ -0.48
SPTLC2-202ENST00000554365 OR6N2Q8NGY6 317 aa12.04□□□□□ -0.48
SPTLC2-202ENST00000554365 FGFBP3Q8TAT2 258 aa12.04□□□□□ -0.48
SPTLC2-202ENST00000554365 IPCEF1Q8WWN9 437 aaPredicted RBP12.04□□□□□ -0.48
SPTLC2-202ENST00000554365 COPS4Q9BT78 406 aa12.04□□□□□ -0.48
SPTLC2-202ENST00000554365 ZNF416Q9BWM5 594 aa12.04□□□□□ -0.48
SPTLC2-202ENST00000554365 YIPF3Q9GZM5 350 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms