RNA–Protein interactions for RNA: ENST00000554315.5

NUMB-209, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 1 (best)

Gene NUMB, Length 1,740 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-209ENST00000554315 GABPB1Q06547 395 aaPredicted RBP11.78□□□□□ -0.52
NUMB-209ENST00000554315 DBPQ10586 325 aaPredicted RBP11.78□□□□□ -0.52
NUMB-209ENST00000554315 PSG7Q13046 419 aa11.78□□□□□ -0.52
NUMB-209ENST00000554315 EIF2B1Q14232 305 aaKnown RBP11.78□□□□□ -0.52
NUMB-209ENST00000554315 MAD2L1BPQ15013 274 aaPredicted RBP11.78□□□□□ -0.52
NUMB-209ENST00000554315 CARTPTQ16568 116 aa11.78□□□□□ -0.52
NUMB-209ENST00000554315 RSPO1Q2MKA7 263 aaPredicted RBP11.78□□□□□ -0.52
NUMB-209ENST00000554315 KRTAP27-1Q3LI81 207 aa11.78□□□□□ -0.52
NUMB-209ENST00000554315 LCN1P1Q5VSP4 162 aa11.78□□□□□ -0.52
NUMB-209ENST00000554315 DRAM2Q6UX65 266 aa11.78□□□□□ -0.52
NUMB-209ENST00000554315 COLCA1Q6ZS62 124 aa11.78□□□□□ -0.52
NUMB-209ENST00000554315 DPY19L4Q7Z388 723 aa11.78□□□□□ -0.52
NUMB-209ENST00000554315 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.78□□□□□ -0.52
NUMB-209ENST00000554315 C10orf105Q8TEF2 133 aa11.78□□□□□ -0.52
NUMB-209ENST00000554315 RDH5Q92781 318 aa11.78□□□□□ -0.52
NUMB-209ENST00000554315 SLAMF6Q96DU3 332 aa11.78□□□□□ -0.52
NUMB-209ENST00000554315 KCNJ15Q99712 375 aa11.78□□□□□ -0.52
NUMB-209ENST00000554315 PIMREGQ9BSJ6 248 aa11.78□□□□□ -0.52
NUMB-209ENST00000554315 COPS4Q9BT78 406 aa11.78□□□□□ -0.52
NUMB-209ENST00000554315 C9orf16Q9BUW7 83 aa11.78□□□□□ -0.52
NUMB-209ENST00000554315 EGLN1Q9GZT9 426 aa11.78□□□□□ -0.52
NUMB-209ENST00000554315 TPK1Q9H3S4 243 aa11.78□□□□□ -0.52
NUMB-209ENST00000554315 PNRC2Q9NPJ4 139 aaKnown RBP11.78□□□□□ -0.52
NUMB-209ENST00000554315 TMEFF2Q9UIK5 374 aaPredicted RBP11.78□□□□□ -0.52
NUMB-209ENST00000554315 F8P00451 2351 aa11.78□□□□□ -0.52
NUMB-209ENST00000554315 ARFGEF3Q5TH69 2177 aa11.78□□□□□ -0.52
NUMB-209ENST00000554315 ZNF878C9JN71 531 aa11.77□□□□□ -0.52
NUMB-209ENST00000554315 M0R135 149 aa11.77□□□□□ -0.52
NUMB-209ENST00000554315 TPD52L2O43399 206 aaKnown RBP11.77□□□□□ -0.52
NUMB-209ENST00000554315 KITLGP21583 273 aa11.77□□□□□ -0.52
NUMB-209ENST00000554315 TNFSF4P23510 183 aa11.77□□□□□ -0.52
NUMB-209ENST00000554315 MPV17P39210 176 aa11.77□□□□□ -0.52
NUMB-209ENST00000554315 TMEM33P57088 247 aa11.77□□□□□ -0.52
NUMB-209ENST00000554315 APOFQ13790 326 aa11.77□□□□□ -0.52
NUMB-209ENST00000554315 ALKBH6Q3KRA9 238 aa11.77□□□□□ -0.52
NUMB-209ENST00000554315 FBXW12Q6X9E4 464 aa11.77□□□□□ -0.52
NUMB-209ENST00000554315 TIGD4Q8IY51 512 aa11.77□□□□□ -0.52
NUMB-209ENST00000554315 TCEANCQ8N8B7 351 aa11.77□□□□□ -0.52
NUMB-209ENST00000554315 TMEM163Q8TC26 289 aa11.77□□□□□ -0.52
NUMB-209ENST00000554315 TRUB1Q8WWH5 349 aaKnown RBP11.77□□□□□ -0.52
NUMB-209ENST00000554315 ZMYND19Q96E35 227 aaPredicted RBP11.77□□□□□ -0.52
NUMB-209ENST00000554315 ZNF799Q96GE5 643 aa11.77□□□□□ -0.52
NUMB-209ENST00000554315 USE1Q9NZ43 259 aa11.77□□□□□ -0.52
NUMB-209ENST00000554315 PURGQ9UJV8 347 aaKnown RBP11.77□□□□□ -0.52
NUMB-209ENST00000554315 TMEM14AQ9Y6G1 99 aa11.77□□□□□ -0.52
NUMB-209ENST00000554315 IGHV4-30-2A0A087WSY4 118 aa11.77□□□□□ -0.53
NUMB-209ENST00000554315 SLC22A31A6NKX4 558 aa11.77□□□□□ -0.53
NUMB-209ENST00000554315 LY6HO94772 140 aa11.77□□□□□ -0.53
NUMB-209ENST00000554315 BAG2O95816 211 aa11.77□□□□□ -0.53
NUMB-209ENST00000554315 HSD11B1P28845 292 aa11.77□□□□□ -0.53
NUMB-209ENST00000554315 RPS27P42677 84 aaKnown RBP11.77□□□□□ -0.53
NUMB-209ENST00000554315 SLC6A9P48067 706 aa11.77□□□□□ -0.53
NUMB-209ENST00000554315 MMP15P51511 669 aa11.77□□□□□ -0.53
NUMB-209ENST00000554315 ALDH3A2P51648 485 aa11.77□□□□□ -0.53
NUMB-209ENST00000554315 EFNB1P98172 346 aa11.77□□□□□ -0.53
NUMB-209ENST00000554315 ZSCAN26Q16670 478 aa11.77□□□□□ -0.53
NUMB-209ENST00000554315 NXNL2Q5VZ03 156 aa11.77□□□□□ -0.53
NUMB-209ENST00000554315 C12orf73Q69YU5 71 aa11.77□□□□□ -0.53
NUMB-209ENST00000554315 LYPD4Q6UWN0 246 aa11.77□□□□□ -0.53
NUMB-209ENST00000554315 MEPCEQ7L2J0 689 aaKnown RBP11.77□□□□□ -0.53
NUMB-209ENST00000554315 PQLC1Q8N2U9 271 aa11.77□□□□□ -0.53
NUMB-209ENST00000554315 CIARTQ8N365 385 aaPredicted RBP11.77□□□□□ -0.53
NUMB-209ENST00000554315 OTOSQ8NHW6 89 aa11.77□□□□□ -0.53
NUMB-209ENST00000554315 THEM6Q8WUY1 208 aa11.77□□□□□ -0.53
NUMB-209ENST00000554315 ZNF582Q96NG8 517 aaPredicted RBP11.77□□□□□ -0.53
NUMB-209ENST00000554315 ABHD6Q9BV23 337 aa11.77□□□□□ -0.53
NUMB-209ENST00000554315 GABARAPL3Q9BY60 117 aa11.77□□□□□ -0.53
NUMB-209ENST00000554315 YIPF3Q9GZM5 350 aa11.77□□□□□ -0.53
NUMB-209ENST00000554315 RIBC2Q9H4K1 309 aa11.77□□□□□ -0.53
NUMB-209ENST00000554315 MED13LQ71F56 2210 aa11.76□□□□□ -0.53
NUMB-209ENST00000554315 VPS13CQ709C8 3753 aa11.76□□□□□ -0.53
NUMB-209ENST00000554315 PRKYO43930 277 aa11.76□□□□□ -0.53
NUMB-209ENST00000554315 ALPLP05186 524 aa11.76□□□□□ -0.53
NUMB-209ENST00000554315 LYNP07948 512 aa11.76□□□□□ -0.53
NUMB-209ENST00000554315 ADH4P08319 380 aa11.76□□□□□ -0.53
NUMB-209ENST00000554315 USF1P22415 310 aaPredicted RBP11.76□□□□□ -0.53
NUMB-209ENST00000554315 GIFP27352 417 aa11.76□□□□□ -0.53
NUMB-209ENST00000554315 OTX1P32242 354 aaPredicted RBP11.76□□□□□ -0.53
NUMB-209ENST00000554315 CDC42P60953 191 aa11.76□□□□□ -0.53
NUMB-209ENST00000554315 LOXL1Q08397 574 aaPredicted RBP11.76□□□□□ -0.53
NUMB-209ENST00000554315 CLEC9AQ6UXN8 241 aa11.76□□□□□ -0.53
NUMB-209ENST00000554315 ZBTB49Q6ZSB9 765 aa11.76□□□□□ -0.53
NUMB-209ENST00000554315 SLC16A9Q7RTY1 509 aa11.76□□□□□ -0.53
NUMB-209ENST00000554315 GID4Q8IVV7 300 aa11.76□□□□□ -0.53
NUMB-209ENST00000554315 OR8J1Q8NGP2 316 aa11.76□□□□□ -0.53
NUMB-209ENST00000554315 ST7LQ8TDW4 575 aa11.76□□□□□ -0.53
NUMB-209ENST00000554315 RNF133Q8WVZ7 376 aa11.76□□□□□ -0.53
NUMB-209ENST00000554315 CHODLQ9H9P2 273 aa11.76□□□□□ -0.53
NUMB-209ENST00000554315 PTTG3PQ9NZH4 202 aa11.76□□□□□ -0.53
NUMB-209ENST00000554315 LAMP5Q9UJQ1 280 aa11.76□□□□□ -0.53
NUMB-209ENST00000554315 SPRY3O43610 288 aa11.75□□□□□ -0.53
NUMB-209ENST00000554315 H2BFMP0C1H6 154 aa11.75□□□□□ -0.53
NUMB-209ENST00000554315 ACHEP22303 614 aa11.75□□□□□ -0.53
NUMB-209ENST00000554315 SLC2A5P22732 501 aa11.75□□□□□ -0.53
NUMB-209ENST00000554315 EPHA2P29317 976 aa11.75□□□□□ -0.53
NUMB-209ENST00000554315 NR4A2P43354 598 aa11.75□□□□□ -0.53
NUMB-209ENST00000554315 CCL8P80075 99 aa11.75□□□□□ -0.53
NUMB-209ENST00000554315 CDK5R2Q13319 367 aa11.75□□□□□ -0.53
NUMB-209ENST00000554315 KCTD18Q6PI47 426 aaPredicted RBP11.75□□□□□ -0.53
NUMB-209ENST00000554315 PGAP1Q75T13 922 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms