RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 SKA3Q8IX90 412 aa9.52□□□□□ -0.89
PABPN1-203ENST00000553960 ZNF433Q8N7K0 673 aaPredicted RBP9.52□□□□□ -0.89
PABPN1-203ENST00000553960 C9orf106Q8NAJ2 232 aa9.52□□□□□ -0.89
PABPN1-203ENST00000553960 ST6GALNAC3Q8NDV1 305 aa9.52□□□□□ -0.89
PABPN1-203ENST00000553960 OR1K1Q8NGR3 316 aa9.52□□□□□ -0.89
PABPN1-203ENST00000553960 OR1F12Q8NHA8 337 aa9.52□□□□□ -0.89
PABPN1-203ENST00000553960 TBC1D15Q8TC07 691 aa9.52□□□□□ -0.89
PABPN1-203ENST00000553960 S100ZQ8WXG8 99 aa9.52□□□□□ -0.89
PABPN1-203ENST00000553960 NANOS1Q8WY41 292 aaKnown RBP9.52□□□□□ -0.89
PABPN1-203ENST00000553960 HSD17B8Q92506 261 aa9.52□□□□□ -0.89
PABPN1-203ENST00000553960 AP3S1Q92572 193 aa9.52□□□□□ -0.89
PABPN1-203ENST00000553960 STARD4Q96DR4 205 aa9.52□□□□□ -0.89
PABPN1-203ENST00000553960 ALKBH3Q96Q83 286 aaPredicted RBP9.52□□□□□ -0.89
PABPN1-203ENST00000553960 TRIB1Q96RU8 372 aa9.52□□□□□ -0.89
PABPN1-203ENST00000553960 VKORC1Q9BQB6 163 aa9.52□□□□□ -0.89
PABPN1-203ENST00000553960 C1QTNF5Q9BXJ0 243 aa9.52□□□□□ -0.89
PABPN1-203ENST00000553960 WNT5BQ9H1J7 359 aa9.52□□□□□ -0.89
PABPN1-203ENST00000553960 OPA3Q9H6K4 179 aa9.52□□□□□ -0.89
PABPN1-203ENST00000553960 PALMDQ9NP74 551 aa9.52□□□□□ -0.89
PABPN1-203ENST00000553960 ZNF71Q9NQZ8 489 aaPredicted RBP9.52□□□□□ -0.89
PABPN1-203ENST00000553960 GALNT8Q9NY28 637 aa9.52□□□□□ -0.89
PABPN1-203ENST00000553960 JKAMPQ9P055 326 aa9.52□□□□□ -0.89
PABPN1-203ENST00000553960 CRNNQ9UBG3 495 aaPredicted RBP9.52□□□□□ -0.89
PABPN1-203ENST00000553960 UPB1Q9UBR1 384 aa9.52□□□□□ -0.89
PABPN1-203ENST00000553960 POLR1DQ9Y2S0 133 aa9.52□□□□□ -0.89
PABPN1-203ENST00000553960 GRIP1Q9Y3R0 1128 aa9.52□□□□□ -0.89
PABPN1-203ENST00000553960 SHANK1Q9Y566 2161 aa9.51□□□□□ -0.89
PABPN1-203ENST00000553960 LOC100506127A0A0U1RQW1 187 aa9.51□□□□□ -0.89
PABPN1-203ENST00000553960 A0A1B0GTI1 187 aa9.51□□□□□ -0.89
PABPN1-203ENST00000553960 MED19A0JLT2 244 aaPredicted RBP9.51□□□□□ -0.89
PABPN1-203ENST00000553960 PIN1P1O15428 100 aa9.51□□□□□ -0.89
PABPN1-203ENST00000553960 KRT33AO76009 404 aa9.51□□□□□ -0.89
PABPN1-203ENST00000553960 TOXO94900 526 aa9.51□□□□□ -0.89
PABPN1-203ENST00000553960 WNT11O96014 354 aa9.51□□□□□ -0.89
PABPN1-203ENST00000553960 IL2RAP01589 272 aa9.51□□□□□ -0.89
PABPN1-203ENST00000553960 CD2P06729 351 aa9.51□□□□□ -0.89
PABPN1-203ENST00000553960 FAM87AP0C7U9 286 aa9.51□□□□□ -0.89
PABPN1-203ENST00000553960 ZNF32P17041 273 aa9.51□□□□□ -0.89
PABPN1-203ENST00000553960 IGFBP3P17936 291 aaPredicted RBP9.51□□□□□ -0.89
PABPN1-203ENST00000553960 SRMP19623 302 aa9.51□□□□□ -0.89
PABPN1-203ENST00000553960 OPRM1P35372 400 aa9.51□□□□□ -0.89
PABPN1-203ENST00000553960 RPS27P42677 84 aaKnown RBP9.51□□□□□ -0.89
PABPN1-203ENST00000553960 TPTEP56180 551 aa9.51□□□□□ -0.89
PABPN1-203ENST00000553960 PSG4Q00888 419 aa9.51□□□□□ -0.89
PABPN1-203ENST00000553960 SLC3A1Q07837 685 aa9.51□□□□□ -0.89
PABPN1-203ENST00000553960 C3AR1Q16581 482 aa9.51□□□□□ -0.89
PABPN1-203ENST00000553960 SOWAHCQ53LP3 525 aaPredicted RBP9.51□□□□□ -0.89
PABPN1-203ENST00000553960 CEP78Q5JTW2 689 aa9.51□□□□□ -0.89
PABPN1-203ENST00000553960 SLC16A14Q7RTX9 510 aa9.51□□□□□ -0.89
PABPN1-203ENST00000553960 CEACAM19Q7Z692 300 aa9.51□□□□□ -0.89
PABPN1-203ENST00000553960 LYPD6Q86Y78 171 aa9.51□□□□□ -0.89
PABPN1-203ENST00000553960 DOLPP1Q86YN1 238 aa9.51□□□□□ -0.89
PABPN1-203ENST00000553960 LINC00346Q8IVM7 164 aa9.51□□□□□ -0.89
PABPN1-203ENST00000553960 OR6Q1Q8NGQ2 317 aa9.51□□□□□ -0.89
PABPN1-203ENST00000553960 ASB5Q8WWX0 329 aa9.51□□□□□ -0.89
PABPN1-203ENST00000553960 PDCD1LG2Q9BQ51 273 aa9.51□□□□□ -0.89
PABPN1-203ENST00000553960 TMED9Q9BVK6 235 aa9.51□□□□□ -0.89
PABPN1-203ENST00000553960 PBOV1Q9GZY1 135 aa9.51□□□□□ -0.89
PABPN1-203ENST00000553960 RABL2AQ9UBK7 228 aaPredicted RBP9.51□□□□□ -0.89
PABPN1-203ENST00000553960 PLEKHB1Q9UF11 243 aaPredicted RBP9.51□□□□□ -0.89
PABPN1-203ENST00000553960 RABL2BQ9UNT1 228 aa9.51□□□□□ -0.89
PABPN1-203ENST00000553960 PEX16Q9Y5Y5 336 aa9.51□□□□□ -0.89
PABPN1-203ENST00000553960 DSPP15924 2871 aaKnown RBP9.5□□□□□ -0.89
PABPN1-203ENST00000553960 ZZEF1O43149 2961 aa9.5□□□□□ -0.89
PABPN1-203ENST00000553960 A0A0G2JK05 382 aa9.5□□□□□ -0.89
PABPN1-203ENST00000553960 NOTOA8MTQ0 251 aa9.5□□□□□ -0.89
PABPN1-203ENST00000553960 M0R135 149 aa9.5□□□□□ -0.89
PABPN1-203ENST00000553960 PDCD5O14737 125 aa9.5□□□□□ -0.89
PABPN1-203ENST00000553960 MAGEB4O15481 346 aaPredicted RBP9.5□□□□□ -0.89
PABPN1-203ENST00000553960 SLC19A2O60779 497 aa9.5□□□□□ -0.89
PABPN1-203ENST00000553960 TPOP07202 933 aa9.5□□□□□ -0.89
PABPN1-203ENST00000553960 ACSM4P0C7M7 580 aa9.5□□□□□ -0.89
PABPN1-203ENST00000553960 SDC2P34741 201 aa9.5□□□□□ -0.89
PABPN1-203ENST00000553960 PSMB10P40306 273 aa9.5□□□□□ -0.89
PABPN1-203ENST00000553960 RIN1Q13671 783 aa9.5□□□□□ -0.89
PABPN1-203ENST00000553960 GABRA6Q16445 453 aa9.5□□□□□ -0.89
PABPN1-203ENST00000553960 HSD17B12Q53GQ0 312 aa9.5□□□□□ -0.89
PABPN1-203ENST00000553960 BCL2L15Q5TBC7 163 aa9.5□□□□□ -0.89
PABPN1-203ENST00000553960 TMEM211Q6ICI0 200 aa9.5□□□□□ -0.89
PABPN1-203ENST00000553960 FAM166AQ6J272 317 aa9.5□□□□□ -0.89
PABPN1-203ENST00000553960 TMEM53Q6P2H8 277 aa9.5□□□□□ -0.89
PABPN1-203ENST00000553960 CORO6Q6QEF8 472 aa9.5□□□□□ -0.89
PABPN1-203ENST00000553960 METAP1DQ6UB28 335 aaPredicted RBP9.5□□□□□ -0.89
PABPN1-203ENST00000553960 UTS2BQ765I0 119 aa9.5□□□□□ -0.89
PABPN1-203ENST00000553960 DOK3Q7L591 496 aa9.5□□□□□ -0.89
PABPN1-203ENST00000553960 MRGPRGQ86SM5 289 aa9.5□□□□□ -0.89
PABPN1-203ENST00000553960 ZNF676Q8N7Q3 588 aa9.5□□□□□ -0.89
PABPN1-203ENST00000553960 ZFP41Q8N8Y5 198 aa9.5□□□□□ -0.89
PABPN1-203ENST00000553960 TMEM203Q969S6 136 aa9.5□□□□□ -0.89
PABPN1-203ENST00000553960 RELTQ969Z4 430 aa9.5□□□□□ -0.89
PABPN1-203ENST00000553960 ZNF799Q96GE5 643 aa9.5□□□□□ -0.89
PABPN1-203ENST00000553960 DMRTA2Q96SC8 542 aa9.5□□□□□ -0.89
PABPN1-203ENST00000553960 BARHL1Q9BZE3 327 aa9.5□□□□□ -0.89
PABPN1-203ENST00000553960 PPIL3Q9H2H8 161 aaKnown RBP9.5□□□□□ -0.89
PABPN1-203ENST00000553960 EXOSC4Q9NPD3 245 aaKnown RBP9.5□□□□□ -0.89
PABPN1-203ENST00000553960 ZNF275Q9NSD4 429 aaPredicted RBP9.5□□□□□ -0.89
PABPN1-203ENST00000553960 TBCCD1Q9NVR7 557 aa9.5□□□□□ -0.89
PABPN1-203ENST00000553960 PLEK2Q9NYT0 353 aa9.5□□□□□ -0.89
PABPN1-203ENST00000553960 ABRACLQ9P1F3 81 aa9.5□□□□□ -0.89
PABPN1-203ENST00000553960 V9GYS6 101 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms