RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 NME4O00746 187 aa3.1□□□□□ -1.91
SYNE2-210ENST00000553455 NVLO15381 856 aaKnown RBP3.1□□□□□ -1.91
SYNE2-210ENST00000553455 CTDNEP1O95476 244 aa3.1□□□□□ -1.91
SYNE2-210ENST00000553455 HPRT1P00492 218 aa3.1□□□□□ -1.91
SYNE2-210ENST00000553455 GZMAP12544 262 aa3.1□□□□□ -1.91
SYNE2-210ENST00000553455 USF1P22415 310 aaPredicted RBP3.1□□□□□ -1.91
SYNE2-210ENST00000553455 CD82P27701 267 aa3.1□□□□□ -1.91
SYNE2-210ENST00000553455 ZNF121P58317 390 aaPredicted RBP3.1□□□□□ -1.91
SYNE2-210ENST00000553455 RPS23P62266 143 aaKnown RBP3.1□□□□□ -1.91
SYNE2-210ENST00000553455 RAB11AP62491 216 aa3.1□□□□□ -1.91
SYNE2-210ENST00000553455 KIR2DS1Q14954 304 aa3.1□□□□□ -1.91
SYNE2-210ENST00000553455 RAB11BQ15907 218 aa3.1□□□□□ -1.91
SYNE2-210ENST00000553455 PRMT9Q6P2P2 845 aa3.1□□□□□ -1.91
SYNE2-210ENST00000553455 ZNF695Q8IW36 515 aa3.1□□□□□ -1.91
SYNE2-210ENST00000553455 COX18Q8N8Q8 333 aa3.1□□□□□ -1.91
SYNE2-210ENST00000553455 OR6Q1Q8NGQ2 317 aa3.1□□□□□ -1.91
SYNE2-210ENST00000553455 OR51F2Q8NH61 342 aa3.1□□□□□ -1.91
SYNE2-210ENST00000553455 UBALD1Q8TB05 177 aa3.1□□□□□ -1.91
SYNE2-210ENST00000553455 NEURL3Q96EH8 262 aa3.1□□□□□ -1.91
SYNE2-210ENST00000553455 TIMM17AQ99595 171 aa3.1□□□□□ -1.91
SYNE2-210ENST00000553455 NDFIP1Q9BT67 221 aa3.1□□□□□ -1.91
SYNE2-210ENST00000553455 MRM3Q9HC36 420 aaKnown RBP3.1□□□□□ -1.91
SYNE2-210ENST00000553455 HMG20AQ9NP66 347 aa3.1□□□□□ -1.91
SYNE2-210ENST00000553455 RPRD1BQ9NQG5 326 aaKnown RBP3.1□□□□□ -1.91
SYNE2-210ENST00000553455 PEF1Q9UBV8 284 aaKnown RBP3.1□□□□□ -1.91
SYNE2-210ENST00000553455 YARS2Q9Y2Z4 477 aaKnown RBP3.1□□□□□ -1.91
SYNE2-210ENST00000553455 RHBDD3Q9Y3P4 386 aa3.1□□□□□ -1.91
SYNE2-210ENST00000553455 YTHDF2Q9Y5A9 579 aaKnown RBP3.1□□□□□ -1.91
SYNE2-210ENST00000553455 IGKV2D-24A0A075B6R9 120 aa3.09□□□□□ -1.91
SYNE2-210ENST00000553455 A0A1W2PRD5 423 aa3.09□□□□□ -1.91
SYNE2-210ENST00000553455 OR6C74A6NCV1 312 aa3.09□□□□□ -1.91
SYNE2-210ENST00000553455 ZNF705GA8MUZ8 300 aaPredicted RBP3.09□□□□□ -1.91
SYNE2-210ENST00000553455 ZNF99A8MXY4 864 aaPredicted RBP3.09□□□□□ -1.91
SYNE2-210ENST00000553455 RSPH10B2B2RC85 870 aa3.09□□□□□ -1.91
SYNE2-210ENST00000553455 ERI3O43414 337 aaKnown RBP3.09□□□□□ -1.91
SYNE2-210ENST00000553455 ZNF207O43670 478 aaKnown RBP3.09□□□□□ -1.91
SYNE2-210ENST00000553455 MED6O75586 246 aa3.09□□□□□ -1.91
SYNE2-210ENST00000553455 SCELO95171 688 aa3.09□□□□□ -1.91
SYNE2-210ENST00000553455 RSPH10BP0C881 870 aa3.09□□□□□ -1.91
SYNE2-210ENST00000553455 PGA5P0DJD9 388 aa3.09□□□□□ -1.91
SYNE2-210ENST00000553455 PSMC3P17980 439 aa3.09□□□□□ -1.91
SYNE2-210ENST00000553455 IL32P24001 234 aa3.09□□□□□ -1.91
SYNE2-210ENST00000553455 CCT6AP40227 531 aaKnown RBP3.09□□□□□ -1.91
SYNE2-210ENST00000553455 SERPINB8P50452 374 aa3.09□□□□□ -1.91
SYNE2-210ENST00000553455 FABP6P51161 128 aa3.09□□□□□ -1.91
SYNE2-210ENST00000553455 SYNJ2BPP57105 145 aa3.09□□□□□ -1.91
SYNE2-210ENST00000553455 ZNF266Q14584 549 aa3.09□□□□□ -1.91
SYNE2-210ENST00000553455 STK11Q15831 433 aa3.09□□□□□ -1.91
SYNE2-210ENST00000553455 GABRA6Q16445 453 aa3.09□□□□□ -1.91
SYNE2-210ENST00000553455 GCSAMLQ5JQS6 135 aa3.09□□□□□ -1.91
SYNE2-210ENST00000553455 HORMAD1Q86X24 394 aa3.09□□□□□ -1.91
SYNE2-210ENST00000553455 CBR4Q8N4T8 237 aa3.09□□□□□ -1.91
SYNE2-210ENST00000553455 OR5AR1Q8NGP9 310 aa3.09□□□□□ -1.91
SYNE2-210ENST00000553455 OR8U1Q8NH10 309 aa3.09□□□□□ -1.91
SYNE2-210ENST00000553455 RGP1Q92546 391 aaPredicted RBP3.09□□□□□ -1.91
SYNE2-210ENST00000553455 DCPSQ96C86 337 aaKnown RBP3.09□□□□□ -1.91
SYNE2-210ENST00000553455 CAMK2N2Q96S95 79 aa3.09□□□□□ -1.91
SYNE2-210ENST00000553455 ZNF355PQ9NSJ1 428 aa3.09□□□□□ -1.91
SYNE2-210ENST00000553455 SLC39A1Q9NY26 324 aa3.09□□□□□ -1.91
SYNE2-210ENST00000553455 ZNRD1Q9P1U0 126 aa3.09□□□□□ -1.91
SYNE2-210ENST00000553455 SLC17A7Q9P2U7 560 aa3.09□□□□□ -1.91
SYNE2-210ENST00000553455 PALLDQ8WX93 1383 aa3.09□□□□□ -1.92
SYNE2-210ENST00000553455 DOCK9Q9BZ29 2069 aa3.08□□□□□ -1.92
SYNE2-210ENST00000553455 A0A0J9YXV3 536 aa3.08□□□□□ -1.92
SYNE2-210ENST00000553455 TMEM223A0PJW6 202 aa3.08□□□□□ -1.92
SYNE2-210ENST00000553455 PLPP1O14494 284 aa3.08□□□□□ -1.92
SYNE2-210ENST00000553455 NMT2O60551 498 aa3.08□□□□□ -1.92
SYNE2-210ENST00000553455 IGKV3-11P04433 115 aa3.08□□□□□ -1.92
SYNE2-210ENST00000553455 KRT16P08779 473 aa3.08□□□□□ -1.92
SYNE2-210ENST00000553455 TACSTD2P09758 323 aa3.08□□□□□ -1.92
SYNE2-210ENST00000553455 POLR2MP0CAP2 368 aa3.08□□□□□ -1.92
SYNE2-210ENST00000553455 PGA4P0DJD7 388 aa3.08□□□□□ -1.92
SYNE2-210ENST00000553455 PGA3P0DJD8 388 aa3.08□□□□□ -1.92
SYNE2-210ENST00000553455 GABRG2P18507 467 aa3.08□□□□□ -1.92
SYNE2-210ENST00000553455 DTYMKP23919 212 aa3.08□□□□□ -1.92
SYNE2-210ENST00000553455 KIR3DL2P43630 455 aa3.08□□□□□ -1.92
SYNE2-210ENST00000553455 OR1G1P47890 313 aa3.08□□□□□ -1.92
SYNE2-210ENST00000553455 SLC11A1P49279 550 aa3.08□□□□□ -1.92
SYNE2-210ENST00000553455 CDKN2DP55273 166 aa3.08□□□□□ -1.92
SYNE2-210ENST00000553455 DAOAP59103 153 aa3.08□□□□□ -1.92
SYNE2-210ENST00000553455 DGCR6Q14129 220 aa3.08□□□□□ -1.92
SYNE2-210ENST00000553455 KLHL40Q2TBA0 621 aa3.08□□□□□ -1.92
SYNE2-210ENST00000553455 LINC00483Q53H64 154 aa3.08□□□□□ -1.92
SYNE2-210ENST00000553455 FAM78AQ5JUQ0 283 aa3.08□□□□□ -1.92
SYNE2-210ENST00000553455 TTC19Q6DKK2 380 aaPredicted RBP3.08□□□□□ -1.92
SYNE2-210ENST00000553455 SNX31Q8N9S9 440 aa3.08□□□□□ -1.92
SYNE2-210ENST00000553455 OR11H7Q8NGC8 314 aa3.08□□□□□ -1.92
SYNE2-210ENST00000553455 OR6N1Q8NGY5 312 aa3.08□□□□□ -1.92
SYNE2-210ENST00000553455 PTX4Q96A99 478 aa3.08□□□□□ -1.92
SYNE2-210ENST00000553455 STARD4Q96DR4 205 aa3.08□□□□□ -1.92
SYNE2-210ENST00000553455 DYNLL2Q96FJ2 89 aa3.08□□□□□ -1.92
SYNE2-210ENST00000553455 C9orf72Q96LT7 481 aa3.08□□□□□ -1.92
SYNE2-210ENST00000553455 UQCC2Q9BRT2 126 aa3.08□□□□□ -1.92
SYNE2-210ENST00000553455 SAMD10Q9BYL1 202 aa3.08□□□□□ -1.92
SYNE2-210ENST00000553455 CYP3A43Q9HB55 503 aa3.08□□□□□ -1.92
SYNE2-210ENST00000553455 WFDC1Q9HC57 220 aa3.08□□□□□ -1.92
SYNE2-210ENST00000553455 PRSS16Q9NQE7 514 aa3.08□□□□□ -1.92
SYNE2-210ENST00000553455 PCDH11XQ9BZA7 1347 aa3.08□□□□□ -1.92
SYNE2-210ENST00000553455 PCM1Q15154 2024 aa3.08□□□□□ -1.92
SYNE2-210ENST00000553455 PLEKHG2Q9H7P9 1386 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms