RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 C10orf67Q8IYJ2 551 aa13.06□□□□□ -0.32
SHMT2-204ENST00000553324 HS3ST5Q8IZT8 346 aa13.06□□□□□ -0.32
SHMT2-204ENST00000553324 OR6K6Q8NGW6 343 aa13.06□□□□□ -0.32
SHMT2-204ENST00000553324 OTULINQ96BN8 352 aa13.06□□□□□ -0.32
SHMT2-204ENST00000553324 HCAR1Q9BXC0 346 aa13.06□□□□□ -0.32
SHMT2-204ENST00000553324 PNRC2Q9NPJ4 139 aaKnown RBP13.06□□□□□ -0.32
SHMT2-204ENST00000553324 PAPOLBQ9NRJ5 636 aaKnown RBP13.06□□□□□ -0.32
SHMT2-204ENST00000553324 ZNF275Q9NSD4 429 aaPredicted RBP13.06□□□□□ -0.32
SHMT2-204ENST00000553324 DDX28Q9NUL7 540 aaKnown RBP13.06□□□□□ -0.32
SHMT2-204ENST00000553324 TMEM160Q9NX00 188 aa13.06□□□□□ -0.32
SHMT2-204ENST00000553324 ABCA1O95477 2261 aa13.05□□□□□ -0.32
SHMT2-204ENST00000553324 TVP23AA6NH52 213 aa13.05□□□□□ -0.32
SHMT2-204ENST00000553324 PRR23D1E9PI22 279 aaPredicted RBP13.05□□□□□ -0.32
SHMT2-204ENST00000553324 G3V2T6 193 aa13.05□□□□□ -0.32
SHMT2-204ENST00000553324 CRLF1O75462 422 aa13.05□□□□□ -0.32
SHMT2-204ENST00000553324 GLCEO94923 617 aa13.05□□□□□ -0.32
SHMT2-204ENST00000553324 GYPBP06028 91 aa13.05□□□□□ -0.32
SHMT2-204ENST00000553324 ACSM4P0C7M7 580 aa13.05□□□□□ -0.32
SHMT2-204ENST00000553324 PRR23D2P0DMB1 279 aaPredicted RBP13.05□□□□□ -0.32
SHMT2-204ENST00000553324 TNFRSF1AP19438 455 aa13.05□□□□□ -0.32
SHMT2-204ENST00000553324 SLC15A1P46059 708 aa13.05□□□□□ -0.32
SHMT2-204ENST00000553324 TAF13Q15543 124 aa13.05□□□□□ -0.32
SHMT2-204ENST00000553324 FAM166AQ6J272 317 aa13.05□□□□□ -0.32
SHMT2-204ENST00000553324 USP51Q70EK9 711 aa13.05□□□□□ -0.32
SHMT2-204ENST00000553324 RHOUQ7L0Q8 258 aa13.05□□□□□ -0.32
SHMT2-204ENST00000553324 ASRGL1Q7L266 308 aa13.05□□□□□ -0.32
SHMT2-204ENST00000553324 SHFQ7M4L6 423 aa13.05□□□□□ -0.32
SHMT2-204ENST00000553324 DCXRQ7Z4W1 244 aa13.05□□□□□ -0.32
SHMT2-204ENST00000553324 PARP8Q8N3A8 854 aa13.05□□□□□ -0.32
SHMT2-204ENST00000553324 IQCF1Q8N6M8 205 aa13.05□□□□□ -0.32
SHMT2-204ENST00000553324 ZNF511Q8NB15 262 aa13.05□□□□□ -0.32
SHMT2-204ENST00000553324 ZNRF4Q8WWF5 429 aa13.05□□□□□ -0.32
SHMT2-204ENST00000553324 YIPF5Q969M3 257 aa13.05□□□□□ -0.32
SHMT2-204ENST00000553324 TIMD4Q96H15 378 aa13.05□□□□□ -0.32
SHMT2-204ENST00000553324 PLEKHA8Q96JA3 519 aa13.05□□□□□ -0.32
SHMT2-204ENST00000553324 MAP6Q96JE9 813 aa13.05□□□□□ -0.32
SHMT2-204ENST00000553324 ZNF582Q96NG8 517 aaPredicted RBP13.05□□□□□ -0.32
SHMT2-204ENST00000553324 WDR76Q9H967 626 aa13.05□□□□□ -0.32
SHMT2-204ENST00000553324 MSL2Q9HCI7 577 aa13.05□□□□□ -0.32
SHMT2-204ENST00000553324 ENOPH1Q9UHY7 261 aa13.05□□□□□ -0.32
SHMT2-204ENST00000553324 COMMD3-BMI1R4GMX3 469 aa13.05□□□□□ -0.32
SHMT2-204ENST00000553324 TLN2Q9Y4G6 2542 aa13.04□□□□□ -0.32
SHMT2-204ENST00000553324 LOC100289279A0A1B0GTE1 492 aa13.04□□□□□ -0.32
SHMT2-204ENST00000553324 LRP5LA4QPB2 252 aa13.04□□□□□ -0.32
SHMT2-204ENST00000553324 ZSCAN5BA6NJL1 495 aa13.04□□□□□ -0.32
SHMT2-204ENST00000553324 CLDN25C9JDP6 229 aa13.04□□□□□ -0.32
SHMT2-204ENST00000553324 M0R135 149 aa13.04□□□□□ -0.32
SHMT2-204ENST00000553324 EBAG9O00559 213 aa13.04□□□□□ -0.32
SHMT2-204ENST00000553324 LMX1BO60663 402 aa13.04□□□□□ -0.32
SHMT2-204ENST00000553324 CDC14BO60729 498 aa13.04□□□□□ -0.32
SHMT2-204ENST00000553324 RP2O75695 350 aa13.04□□□□□ -0.32
SHMT2-204ENST00000553324 APOC1P02654 83 aa13.04□□□□□ -0.32
SHMT2-204ENST00000553324 LCATP04180 440 aa13.04□□□□□ -0.32
SHMT2-204ENST00000553324 SPARCP09486 303 aa13.04□□□□□ -0.32
SHMT2-204ENST00000553324 CLUP10909 449 aa13.04□□□□□ -0.32
SHMT2-204ENST00000553324 GSTT1P30711 240 aa13.04□□□□□ -0.32
SHMT2-204ENST00000553324 ESRRGP62508 458 aa13.04□□□□□ -0.32
SHMT2-204ENST00000553324 TNFAIP6P98066 277 aaPredicted RBP13.04□□□□□ -0.32
SHMT2-204ENST00000553324 DBPQ10586 325 aaPredicted RBP13.04□□□□□ -0.32
SHMT2-204ENST00000553324 LINC01590Q5TEZ4 76 aa13.04□□□□□ -0.32
SHMT2-204ENST00000553324 FAHD1Q6P587 224 aa13.04□□□□□ -0.32
SHMT2-204ENST00000553324 DRAM2Q6UX65 266 aa13.04□□□□□ -0.32
SHMT2-204ENST00000553324 PEG10Q86TG7 708 aaKnown RBP13.04□□□□□ -0.32
SHMT2-204ENST00000553324 OR13G1Q8NGZ3 307 aa13.04□□□□□ -0.32
SHMT2-204ENST00000553324 RAB1CQ92928 201 aa13.04□□□□□ -0.32
SHMT2-204ENST00000553324 ZNF799Q96GE5 643 aa13.04□□□□□ -0.32
SHMT2-204ENST00000553324 INTS14Q96SY0 518 aa13.04□□□□□ -0.32
SHMT2-204ENST00000553324 PRRG3Q9BZD7 231 aa13.04□□□□□ -0.32
SHMT2-204ENST00000553324 OR51V1Q9H2C8 321 aa13.04□□□□□ -0.32
SHMT2-204ENST00000553324 POFUT1Q9H488 388 aa13.04□□□□□ -0.32
SHMT2-204ENST00000553324 TOR3AQ9H497 397 aa13.04□□□□□ -0.32
SHMT2-204ENST00000553324 SP140LQ9H930 580 aa13.04□□□□□ -0.32
SHMT2-204ENST00000553324 SLC25A19Q9HC21 320 aa13.04□□□□□ -0.32
SHMT2-204ENST00000553324 PTTG3PQ9NZH4 202 aa13.04□□□□□ -0.32
SHMT2-204ENST00000553324 IL19Q9UHD0 177 aa13.04□□□□□ -0.32
SHMT2-204ENST00000553324 CDC42EP3Q9UKI2 254 aa13.04□□□□□ -0.32
SHMT2-204ENST00000553324 KCNS2Q9ULS6 477 aa13.04□□□□□ -0.32
SHMT2-204ENST00000553324 NSD1Q96L73 2696 aaPredicted RBP13.03□□□□□ -0.32
SHMT2-204ENST00000553324 FAM183AA6NL82 134 aa13.03□□□□□ -0.32
SHMT2-204ENST00000553324 PRODHO43272 600 aa13.03□□□□□ -0.32
SHMT2-204ENST00000553324 TGFAP01135 160 aa13.03□□□□□ -0.32
SHMT2-204ENST00000553324 ANPEPP15144 967 aa13.03□□□□□ -0.32
SHMT2-204ENST00000553324 OTX1P32242 354 aaPredicted RBP13.03□□□□□ -0.32
SHMT2-204ENST00000553324 DAPP51397 102 aa13.03□□□□□ -0.32
SHMT2-204ENST00000553324 CRISP1P54107 249 aa13.03□□□□□ -0.32
SHMT2-204ENST00000553324 GRB2P62993 217 aaKnown RBP13.03□□□□□ -0.32
SHMT2-204ENST00000553324 CCNIQ14094 377 aa13.03□□□□□ -0.32
SHMT2-204ENST00000553324 TRIP10Q15642 601 aa13.03□□□□□ -0.32
SHMT2-204ENST00000553324 SNAPC1Q16533 368 aa13.03□□□□□ -0.32
SHMT2-204ENST00000553324 TMEM255AQ5JRV8 349 aa13.03□□□□□ -0.32
SHMT2-204ENST00000553324 SLC35D3Q5M8T2 416 aa13.03□□□□□ -0.32
SHMT2-204ENST00000553324 LINC01356Q8N9X3 169 aa13.03□□□□□ -0.32
SHMT2-204ENST00000553324 OR8G5Q8NG78 346 aa13.03□□□□□ -0.32
SHMT2-204ENST00000553324 OR2Z1Q8NG97 314 aa13.03□□□□□ -0.32
SHMT2-204ENST00000553324 CCL17Q92583 94 aa13.03□□□□□ -0.32
SHMT2-204ENST00000553324 GTF3AQ92664 365 aaKnown RBP13.03□□□□□ -0.32
SHMT2-204ENST00000553324 MSI2Q96DH6 328 aaKnown RBP13.03□□□□□ -0.32
SHMT2-204ENST00000553324 SLAMF6Q96DU3 332 aa13.03□□□□□ -0.32
SHMT2-204ENST00000553324 C1orf159Q96HA4 380 aa13.03□□□□□ -0.32
SHMT2-204ENST00000553324 KCNJ15Q99712 375 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms