RNA–Protein interactions for RNA: ENST00000552590.6

PRIM1-208, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-208ENST00000552590 ZNF678Q5SXM1 525 aa6.51□□□□□ -1.37
PRIM1-208ENST00000552590 FAM27D1Q5T7N8 215 aa6.51□□□□□ -1.37
PRIM1-208ENST00000552590 NXNQ6DKJ4 435 aa6.51□□□□□ -1.37
PRIM1-208ENST00000552590 C3orf62Q6ZUJ4 267 aa6.51□□□□□ -1.37
PRIM1-208ENST00000552590 LHFPL4Q7Z7J7 247 aa6.51□□□□□ -1.37
PRIM1-208ENST00000552590 ZNF329Q86UD4 541 aa6.51□□□□□ -1.37
PRIM1-208ENST00000552590 NUDCD3Q8IVD9 361 aa6.51□□□□□ -1.37
PRIM1-208ENST00000552590 NPEPL1Q8NDH3 523 aa6.51□□□□□ -1.37
PRIM1-208ENST00000552590 BHLHE23Q8NDY6 225 aa6.51□□□□□ -1.37
PRIM1-208ENST00000552590 SLC26A10Q8NG04 563 aa6.51□□□□□ -1.37
PRIM1-208ENST00000552590 RPS4Y2Q8TD47 263 aa6.51□□□□□ -1.37
PRIM1-208ENST00000552590 AENQ8WTP8 325 aaKnown RBP6.51□□□□□ -1.37
PRIM1-208ENST00000552590 ZNF566Q969W8 418 aa6.51□□□□□ -1.37
PRIM1-208ENST00000552590 MTERF3Q96E29 417 aa6.51□□□□□ -1.37
PRIM1-208ENST00000552590 TMEM237Q96Q45 408 aa6.51□□□□□ -1.37
PRIM1-208ENST00000552590 ZNF347Q96SE7 839 aa6.51□□□□□ -1.37
PRIM1-208ENST00000552590 FAM110AQ9BQ89 295 aa6.51□□□□□ -1.37
PRIM1-208ENST00000552590 KCNN2Q9H2S1 579 aa6.51□□□□□ -1.37
PRIM1-208ENST00000552590 RRAGDQ9NQL2 400 aaPredicted RBP6.51□□□□□ -1.37
PRIM1-208ENST00000552590 KIAA1456Q9P272 454 aa6.51□□□□□ -1.37
PRIM1-208ENST00000552590 PITPNC1Q9UKF7 332 aa6.51□□□□□ -1.37
PRIM1-208ENST00000552590 CCL27Q9Y4X3 112 aa6.51□□□□□ -1.37
PRIM1-208ENST00000552590 LYVE1Q9Y5Y7 322 aa6.51□□□□□ -1.37
PRIM1-208ENST00000552590 DNAH5Q8TE73 4624 aa6.51□□□□□ -1.37
PRIM1-208ENST00000552590 RNF103-CHMP3A0A140T963 221 aa6.5□□□□□ -1.37
PRIM1-208ENST00000552590 C11orf98E9PRG8 122 aa6.5□□□□□ -1.37
PRIM1-208ENST00000552590 PKNOX1P55347 436 aa6.5□□□□□ -1.37
PRIM1-208ENST00000552590 HPCAP84074 193 aa6.5□□□□□ -1.37
PRIM1-208ENST00000552590 HAGHQ16775 308 aa6.5□□□□□ -1.37
PRIM1-208ENST00000552590 INTS11Q5TA45 600 aaKnown RBP6.5□□□□□ -1.37
PRIM1-208ENST00000552590 HHATQ5VTY9 493 aa6.5□□□□□ -1.37
PRIM1-208ENST00000552590 LIPMQ5VYY2 423 aa6.5□□□□□ -1.37
PRIM1-208ENST00000552590 PXKQ7Z7A4 578 aa6.5□□□□□ -1.37
PRIM1-208ENST00000552590 ZNF440Q8IYI8 595 aa6.5□□□□□ -1.37
PRIM1-208ENST00000552590 OR6X1Q8NH79 312 aa6.5□□□□□ -1.37
PRIM1-208ENST00000552590 PTP4A1Q93096 173 aa6.5□□□□□ -1.37
PRIM1-208ENST00000552590 SLC41A3Q96GZ6 507 aa6.5□□□□□ -1.37
PRIM1-208ENST00000552590 ZNF583Q96ND8 569 aa6.5□□□□□ -1.37
PRIM1-208ENST00000552590 CCL13Q99616 98 aa6.5□□□□□ -1.37
PRIM1-208ENST00000552590 NABP2Q9BQ15 211 aa6.5□□□□□ -1.37
PRIM1-208ENST00000552590 ECSITQ9BQ95 431 aa6.5□□□□□ -1.37
PRIM1-208ENST00000552590 OR2H1Q9GZK4 316 aa6.5□□□□□ -1.37
PRIM1-208ENST00000552590 PPP1R3EQ9H7J1 279 aa6.5□□□□□ -1.37
PRIM1-208ENST00000552590 ABCB10Q9NRK6 738 aa6.5□□□□□ -1.37
PRIM1-208ENST00000552590 C1orf109Q9NX04 203 aa6.5□□□□□ -1.37
PRIM1-208ENST00000552590 IGKV1D-42A0A075B6H8 117 aa6.49□□□□□ -1.37
PRIM1-208ENST00000552590 TRAV36DV7A0A075B6V5 113 aa6.49□□□□□ -1.37
PRIM1-208ENST00000552590 IGLV1-36A0A0B4J1U3 117 aa6.49□□□□□ -1.37
PRIM1-208ENST00000552590 CDHR4A6H8M9 788 aa6.49□□□□□ -1.37
PRIM1-208ENST00000552590 SH2D7A6NKC9 451 aaPredicted RBP6.49□□□□□ -1.37
PRIM1-208ENST00000552590 LRRN3E7EW58 273 aa6.49□□□□□ -1.37
PRIM1-208ENST00000552590 SNRPAP09012 282 aaKnown RBP6.49□□□□□ -1.37
PRIM1-208ENST00000552590 GP9P14770 177 aa6.49□□□□□ -1.37
PRIM1-208ENST00000552590 SPNP16150 400 aa6.49□□□□□ -1.37
PRIM1-208ENST00000552590 SLC6A1P30531 599 aa6.49□□□□□ -1.37
PRIM1-208ENST00000552590 HPCAL1P37235 193 aa6.49□□□□□ -1.37
PRIM1-208ENST00000552590 ZNF84P51523 738 aa6.49□□□□□ -1.37
PRIM1-208ENST00000552590 ZNF75DP51815 510 aa6.49□□□□□ -1.37
PRIM1-208ENST00000552590 RAD23AP54725 363 aa6.49□□□□□ -1.37
PRIM1-208ENST00000552590 SLC7A5Q01650 507 aa6.49□□□□□ -1.37
PRIM1-208ENST00000552590 PMS2P11Q13670 270 aa6.49□□□□□ -1.37
PRIM1-208ENST00000552590 GNA13Q14344 377 aa6.49□□□□□ -1.37
PRIM1-208ENST00000552590 MELKQ14680 651 aa6.49□□□□□ -1.37
PRIM1-208ENST00000552590 RNLSQ5VYX0 342 aa6.49□□□□□ -1.37
PRIM1-208ENST00000552590 ZCCHC23Q6ZST2 131 aa6.49□□□□□ -1.37
PRIM1-208ENST00000552590 CYS1Q717R9 158 aa6.49□□□□□ -1.37
PRIM1-208ENST00000552590 SLC35D2Q76EJ3 337 aa6.49□□□□□ -1.37
PRIM1-208ENST00000552590 NET1Q7Z628 596 aaPredicted RBP6.49□□□□□ -1.37
PRIM1-208ENST00000552590 ARMC8Q8IUR7 673 aa6.49□□□□□ -1.37
PRIM1-208ENST00000552590 EGFL6Q8IUX8 553 aa6.49□□□□□ -1.37
PRIM1-208ENST00000552590 ZNF695Q8IW36 515 aa6.49□□□□□ -1.37
PRIM1-208ENST00000552590 OSR2Q8N2R0 312 aa6.49□□□□□ -1.37
PRIM1-208ENST00000552590 FAM216BQ8N7L0 139 aa6.49□□□□□ -1.37
PRIM1-208ENST00000552590 ANKFN1Q8N957 763 aa6.49□□□□□ -1.37
PRIM1-208ENST00000552590 H1FXQ92522 213 aaKnown RBP6.49□□□□□ -1.37
PRIM1-208ENST00000552590 SLC38A4Q969I6 547 aa6.49□□□□□ -1.37
PRIM1-208ENST00000552590 MCHR2Q969V1 340 aa6.49□□□□□ -1.37
PRIM1-208ENST00000552590 ERGIC1Q969X5 290 aa6.49□□□□□ -1.37
PRIM1-208ENST00000552590 FCRL1Q96LA6 429 aa6.49□□□□□ -1.37
PRIM1-208ENST00000552590 ZNF582Q96NG8 517 aaPredicted RBP6.49□□□□□ -1.37
PRIM1-208ENST00000552590 MRPL57Q9BQC6 102 aaKnown RBP6.49□□□□□ -1.37
PRIM1-208ENST00000552590 SPATA9Q9BWV2 254 aa6.49□□□□□ -1.37
PRIM1-208ENST00000552590 SLC38A1Q9H2H9 487 aa6.49□□□□□ -1.37
PRIM1-208ENST00000552590 SIAEQ9HAT2 523 aa6.49□□□□□ -1.37
PRIM1-208ENST00000552590 MID1IP1Q9NPA3 183 aa6.49□□□□□ -1.37
PRIM1-208ENST00000552590 ATAD3AQ9NVI7 634 aa6.49□□□□□ -1.37
PRIM1-208ENST00000552590 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.49□□□□□ -1.37
PRIM1-208ENST00000552590 KAAG1Q9UBP8 84 aa6.49□□□□□ -1.37
PRIM1-208ENST00000552590 PRPF19Q9UMS4 504 aaKnown RBP6.49□□□□□ -1.37
PRIM1-208ENST00000552590 PSMB11A5LHX3 300 aa6.48□□□□□ -1.37
PRIM1-208ENST00000552590 M0R1W7 72 aa6.48□□□□□ -1.37
PRIM1-208ENST00000552590 PLPP3O14495 311 aa6.48□□□□□ -1.37
PRIM1-208ENST00000552590 AGR2O95994 175 aa6.48□□□□□ -1.37
PRIM1-208ENST00000552590 SLPIP03973 132 aa6.48□□□□□ -1.37
PRIM1-208ENST00000552590 PGA4P0DJD7 388 aa6.48□□□□□ -1.37
PRIM1-208ENST00000552590 PGA3P0DJD8 388 aa6.48□□□□□ -1.37
PRIM1-208ENST00000552590 ETS2P15036 469 aa6.48□□□□□ -1.37
PRIM1-208ENST00000552590 RPS4Y1P22090 263 aaKnown RBP6.48□□□□□ -1.37
PRIM1-208ENST00000552590 FPR3P25089 353 aa6.48□□□□□ -1.37
PRIM1-208ENST00000552590 RPL38P63173 70 aaKnown RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms