RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 ADAM30Q9UKF2 790 aa11.12□□□□□ -0.63
CACNB3-223ENST00000552480 FOXJ3Q9UPW0 622 aa11.12□□□□□ -0.63
CACNB3-223ENST00000552480 AK6Q9Y3D8 172 aaKnown RBP11.12□□□□□ -0.63
CACNB3-223ENST00000552480 AKAP13Q12802 2813 aa11.11□□□□□ -0.63
CACNB3-223ENST00000552480 TRAV8-7A0A075B6U6 113 aa11.11□□□□□ -0.63
CACNB3-223ENST00000552480 A0A1B0GVI7 797 aa11.11□□□□□ -0.63
CACNB3-223ENST00000552480 TTLL8A6PVC2 850 aa11.11□□□□□ -0.63
CACNB3-223ENST00000552480 H3BSH0 61 aa11.11□□□□□ -0.63
CACNB3-223ENST00000552480 M0R135 149 aa11.11□□□□□ -0.63
CACNB3-223ENST00000552480 SYT7O43581 403 aa11.11□□□□□ -0.63
CACNB3-223ENST00000552480 SLC19A2O60779 497 aa11.11□□□□□ -0.63
CACNB3-223ENST00000552480 ANXA2P07355 339 aaKnown RBP11.11□□□□□ -0.63
CACNB3-223ENST00000552480 MMP7P09237 267 aaPredicted RBP11.11□□□□□ -0.63
CACNB3-223ENST00000552480 GABRA1P14867 456 aa11.11□□□□□ -0.63
CACNB3-223ENST00000552480 ATF1P18846 271 aa11.11□□□□□ -0.63
CACNB3-223ENST00000552480 CCL1P22362 96 aa11.11□□□□□ -0.63
CACNB3-223ENST00000552480 MPGP29372 298 aa11.11□□□□□ -0.63
CACNB3-223ENST00000552480 PTGER4P35408 488 aa11.11□□□□□ -0.63
CACNB3-223ENST00000552480 TPTEP56180 551 aa11.11□□□□□ -0.63
CACNB3-223ENST00000552480 PSG4Q00888 419 aa11.11□□□□□ -0.63
CACNB3-223ENST00000552480 GALK2Q01415 458 aa11.11□□□□□ -0.63
CACNB3-223ENST00000552480 RSPO1Q2MKA7 263 aaPredicted RBP11.11□□□□□ -0.63
CACNB3-223ENST00000552480 KRTAP27-1Q3LI81 207 aa11.11□□□□□ -0.63
CACNB3-223ENST00000552480 SLC36A2Q495M3 483 aa11.11□□□□□ -0.63
CACNB3-223ENST00000552480 ZNF324BQ6AW86 544 aaPredicted RBP11.11□□□□□ -0.63
CACNB3-223ENST00000552480 ZNF774Q6NX45 483 aa11.11□□□□□ -0.63
CACNB3-223ENST00000552480 ZNF585AQ6P3V2 769 aa11.11□□□□□ -0.63
CACNB3-223ENST00000552480 TFAP2EQ6VUC0 442 aa11.11□□□□□ -0.63
CACNB3-223ENST00000552480 FAM57BQ71RH2 274 aa11.11□□□□□ -0.63
CACNB3-223ENST00000552480 PRSS45Q7RTY3 260 aa11.11□□□□□ -0.63
CACNB3-223ENST00000552480 LUZP2Q86TE4 346 aa11.11□□□□□ -0.63
CACNB3-223ENST00000552480 PARP16Q8N5Y8 322 aa11.11□□□□□ -0.63
CACNB3-223ENST00000552480 C9orf106Q8NAJ2 232 aa11.11□□□□□ -0.63
CACNB3-223ENST00000552480 FGFBP3Q8TAT2 258 aa11.11□□□□□ -0.63
CACNB3-223ENST00000552480 ZNF799Q96GE5 643 aa11.11□□□□□ -0.63
CACNB3-223ENST00000552480 PGAM5Q96HS1 289 aa11.11□□□□□ -0.63
CACNB3-223ENST00000552480 ABRACLQ9P1F3 81 aa11.11□□□□□ -0.63
CACNB3-223ENST00000552480 CKLFQ9UBR5 152 aa11.11□□□□□ -0.63
CACNB3-223ENST00000552480 TUBD1Q9UJT1 453 aa11.11□□□□□ -0.63
CACNB3-223ENST00000552480 V9GY05 133 aa11.11□□□□□ -0.63
CACNB3-223ENST00000552480 A0A0U1RQV5 110 aa11.1□□□□□ -0.63
CACNB3-223ENST00000552480 A0A1B0GTI1 187 aa11.1□□□□□ -0.63
CACNB3-223ENST00000552480 MBD3L4A6NDZ8 208 aaPredicted RBP11.1□□□□□ -0.63
CACNB3-223ENST00000552480 MBD3L3A6NE82 208 aaPredicted RBP11.1□□□□□ -0.63
CACNB3-223ENST00000552480 MBD3L5A6NJ08 208 aaPredicted RBP11.1□□□□□ -0.63
CACNB3-223ENST00000552480 ANXA2P2A6NMY6 339 aa11.1□□□□□ -0.63
CACNB3-223ENST00000552480 F5H5K5 113 aa11.1□□□□□ -0.63
CACNB3-223ENST00000552480 AIPO00170 330 aa11.1□□□□□ -0.63
CACNB3-223ENST00000552480 HPGDSO60760 199 aa11.1□□□□□ -0.63
CACNB3-223ENST00000552480 WDR1O75083 606 aa11.1□□□□□ -0.63
CACNB3-223ENST00000552480 PATE4P0C8F1 98 aa11.1□□□□□ -0.63
CACNB3-223ENST00000552480 SLC2A1P11166 492 aa11.1□□□□□ -0.63
CACNB3-223ENST00000552480 SLC2A2P11168 524 aaPredicted RBP11.1□□□□□ -0.63
CACNB3-223ENST00000552480 IGFBP3P17936 291 aaPredicted RBP11.1□□□□□ -0.63
CACNB3-223ENST00000552480 ADRA2CP18825 462 aa11.1□□□□□ -0.63
CACNB3-223ENST00000552480 HTR5AP47898 357 aa11.1□□□□□ -0.63
CACNB3-223ENST00000552480 SLC6A9P48067 706 aa11.1□□□□□ -0.63
CACNB3-223ENST00000552480 PSMD7P51665 324 aa11.1□□□□□ -0.63
CACNB3-223ENST00000552480 FOXG1P55316 489 aaPredicted RBP11.1□□□□□ -0.63
CACNB3-223ENST00000552480 LINC00303Q3SY05 128 aa11.1□□□□□ -0.63
CACNB3-223ENST00000552480 C9orf135Q5VTT2 229 aa11.1□□□□□ -0.63
CACNB3-223ENST00000552480 DRAM2Q6UX65 266 aa11.1□□□□□ -0.63
CACNB3-223ENST00000552480 DOK3Q7L591 496 aa11.1□□□□□ -0.63
CACNB3-223ENST00000552480 BTLAQ7Z6A9 289 aa11.1□□□□□ -0.63
CACNB3-223ENST00000552480 DPPA2Q7Z7J5 298 aa11.1□□□□□ -0.63
CACNB3-223ENST00000552480 GCNT2Q8N0V5 402 aa11.1□□□□□ -0.63
CACNB3-223ENST00000552480 ZNF433Q8N7K0 673 aaPredicted RBP11.1□□□□□ -0.63
CACNB3-223ENST00000552480 Q8NA96 180 aa11.1□□□□□ -0.63
CACNB3-223ENST00000552480 OR1K1Q8NGR3 316 aa11.1□□□□□ -0.63
CACNB3-223ENST00000552480 OR6K3Q8NGY3 331 aa11.1□□□□□ -0.63
CACNB3-223ENST00000552480 AKR7LQ8NHP1 331 aa11.1□□□□□ -0.63
CACNB3-223ENST00000552480 MBD3L2Q8NHZ7 208 aaPredicted RBP11.1□□□□□ -0.63
CACNB3-223ENST00000552480 TRMT10AQ8TBZ6 339 aaKnown RBP11.1□□□□□ -0.63
CACNB3-223ENST00000552480 OR51E1Q8TCB6 317 aa11.1□□□□□ -0.63
CACNB3-223ENST00000552480 RNF121Q9H920 327 aa11.1□□□□□ -0.63
CACNB3-223ENST00000552480 SP140LQ9H930 580 aa11.1□□□□□ -0.63
CACNB3-223ENST00000552480 ZNF275Q9NSD4 429 aaPredicted RBP11.1□□□□□ -0.63
CACNB3-223ENST00000552480 ZNF224Q9NZL3 707 aa11.1□□□□□ -0.63
CACNB3-223ENST00000552480 V9GYH0 126 aa11.1□□□□□ -0.63
CACNB3-223ENST00000552480 ZNF407Q9C0G0 2248 aa11.09□□□□□ -0.63
CACNB3-223ENST00000552480 A0A096LPE4 126 aa11.09□□□□□ -0.63
CACNB3-223ENST00000552480 A0A1W2PPZ6 126 aa11.09□□□□□ -0.63
CACNB3-223ENST00000552480 IFITM5A6NNB3 132 aa11.09□□□□□ -0.63
CACNB3-223ENST00000552480 CNOT4O95628 575 aaKnown RBP11.09□□□□□ -0.63
CACNB3-223ENST00000552480 IGLV3-1P01715 115 aa11.09□□□□□ -0.63
CACNB3-223ENST00000552480 MAS1P04201 325 aa11.09□□□□□ -0.63
CACNB3-223ENST00000552480 ITGA5P08648 1049 aa11.09□□□□□ -0.63
CACNB3-223ENST00000552480 DBHP09172 617 aa11.09□□□□□ -0.63
CACNB3-223ENST00000552480 COX5BP10606 129 aa11.09□□□□□ -0.63
CACNB3-223ENST00000552480 ZNF12P17014 697 aa11.09□□□□□ -0.63
CACNB3-223ENST00000552480 ARR3P36575 388 aa11.09□□□□□ -0.63
CACNB3-223ENST00000552480 KIR2DL2P43627 348 aaPredicted RBP11.09□□□□□ -0.63
CACNB3-223ENST00000552480 PABPC1L2AQ5JQF8 200 aa11.09□□□□□ -0.63
CACNB3-223ENST00000552480 C1orf185Q5T7R7 199 aa11.09□□□□□ -0.63
CACNB3-223ENST00000552480 ASPHD2Q6ICH7 369 aa11.09□□□□□ -0.63
CACNB3-223ENST00000552480 TMEM53Q6P2H8 277 aa11.09□□□□□ -0.63
CACNB3-223ENST00000552480 ANKRD16Q6P6B7 361 aa11.09□□□□□ -0.63
CACNB3-223ENST00000552480 METAP1DQ6UB28 335 aaPredicted RBP11.09□□□□□ -0.63
CACNB3-223ENST00000552480 CCDC54Q8NEL0 328 aa11.09□□□□□ -0.63
CACNB3-223ENST00000552480 FAM57AQ8TBR7 257 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms