RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 PTTG3PQ9NZH4 202 aa15.8■□□□□ 0.12
PRPF40B-216ENST00000552301 ZAR1LA6NP61 321 aa15.79■□□□□ 0.12
PRPF40B-216ENST00000552301 LCATP04180 440 aa15.79■□□□□ 0.12
PRPF40B-216ENST00000552301 ACSM4P0C7M7 580 aa15.79■□□□□ 0.12
PRPF40B-216ENST00000552301 SLC15A1P46059 708 aa15.79■□□□□ 0.12
PRPF40B-216ENST00000552301 MALLQ13021 153 aa15.79■□□□□ 0.12
PRPF40B-216ENST00000552301 APOFQ13790 326 aa15.79■□□□□ 0.12
PRPF40B-216ENST00000552301 CLEC9AQ6UXN8 241 aa15.79■□□□□ 0.12
PRPF40B-216ENST00000552301 DPY19L4Q7Z388 723 aa15.79■□□□□ 0.12
PRPF40B-216ENST00000552301 ZNF540Q8NDQ6 660 aa15.79■□□□□ 0.12
PRPF40B-216ENST00000552301 BBS1Q8NFJ9 593 aa15.79■□□□□ 0.12
PRPF40B-216ENST00000552301 CMBLQ96DG6 245 aa15.79■□□□□ 0.12
PRPF40B-216ENST00000552301 POFUT1Q9H488 388 aa15.79■□□□□ 0.12
PRPF40B-216ENST00000552301 MARCH7Q9H992 704 aa15.79■□□□□ 0.12
PRPF40B-216ENST00000552301 DECR2Q9NUI1 292 aa15.79■□□□□ 0.12
PRPF40B-216ENST00000552301 H2AFY2Q9P0M6 372 aaPredicted RBP15.79■□□□□ 0.12
PRPF40B-216ENST00000552301 TMEFF2Q9UIK5 374 aaPredicted RBP15.79■□□□□ 0.12
PRPF40B-216ENST00000552301 PURGQ9UJV8 347 aaKnown RBP15.79■□□□□ 0.12
PRPF40B-216ENST00000552301 EI24O14681 340 aa15.78■□□□□ 0.12
PRPF40B-216ENST00000552301 SPRY3O43610 288 aa15.78■□□□□ 0.12
PRPF40B-216ENST00000552301 PSKH1P11801 424 aa15.78■□□□□ 0.12
PRPF40B-216ENST00000552301 HSD11B1P28845 292 aa15.78■□□□□ 0.12
PRPF40B-216ENST00000552301 NAA10P41227 235 aaPredicted RBP15.78■□□□□ 0.12
PRPF40B-216ENST00000552301 RAD23AP54725 363 aa15.78■□□□□ 0.12
PRPF40B-216ENST00000552301 GRB2P62993 217 aaKnown RBP15.78■□□□□ 0.12
PRPF40B-216ENST00000552301 PSG7Q13046 419 aa15.78■□□□□ 0.12
PRPF40B-216ENST00000552301 TSTQ16762 297 aaKnown RBP15.78■□□□□ 0.12
PRPF40B-216ENST00000552301 C12orf73Q69YU5 71 aa15.78■□□□□ 0.12
PRPF40B-216ENST00000552301 SPATC1Q76KD6 591 aa15.78■□□□□ 0.12
PRPF40B-216ENST00000552301 ZNF786Q8N393 782 aa15.78■□□□□ 0.12
PRPF40B-216ENST00000552301 ZNF454Q8N9F8 522 aa15.78■□□□□ 0.12
PRPF40B-216ENST00000552301 MAPK1IP1LQ8NDC0 245 aa15.78■□□□□ 0.12
PRPF40B-216ENST00000552301 OR10S1Q8NGN2 331 aa15.78■□□□□ 0.12
PRPF40B-216ENST00000552301 C1QTNF5Q9BXJ0 243 aa15.78■□□□□ 0.12
PRPF40B-216ENST00000552301 GABARAPL3Q9BY60 117 aa15.78■□□□□ 0.12
PRPF40B-216ENST00000552301 MTORP42345 2549 aa15.77■□□□□ 0.12
PRPF40B-216ENST00000552301 CHD3Q12873 2000 aaKnown RBP15.77■□□□□ 0.12
PRPF40B-216ENST00000552301 TLX2O43763 284 aaPredicted RBP15.77■□□□□ 0.12
PRPF40B-216ENST00000552301 PRKYO43930 277 aa15.77■□□□□ 0.12
PRPF40B-216ENST00000552301 SELENOFO60613 162 aa15.77■□□□□ 0.12
PRPF40B-216ENST00000552301 BAG2O95816 211 aa15.77■□□□□ 0.12
PRPF40B-216ENST00000552301 HPXP02790 462 aa15.77■□□□□ 0.12
PRPF40B-216ENST00000552301 RAC2P15153 192 aa15.77■□□□□ 0.12
PRPF40B-216ENST00000552301 KITLGP21583 273 aa15.77■□□□□ 0.12
PRPF40B-216ENST00000552301 EPHA2P29317 976 aa15.77■□□□□ 0.12
PRPF40B-216ENST00000552301 MAGEB1P43366 347 aa15.77■□□□□ 0.12
PRPF40B-216ENST00000552301 PRKXP51817 358 aa15.77■□□□□ 0.12
PRPF40B-216ENST00000552301 CCL8P80075 99 aa15.77■□□□□ 0.12
PRPF40B-216ENST00000552301 GABPB1Q06547 395 aaPredicted RBP15.77■□□□□ 0.12
PRPF40B-216ENST00000552301 KRTAP27-1Q3LI81 207 aa15.77■□□□□ 0.12
PRPF40B-216ENST00000552301 DRAM2Q6UX65 266 aa15.77■□□□□ 0.12
PRPF40B-216ENST00000552301 TIGD4Q8IY51 512 aa15.77■□□□□ 0.12
PRPF40B-216ENST00000552301 PQLC1Q8N2U9 271 aa15.77■□□□□ 0.12
PRPF40B-216ENST00000552301 ZNF283Q8N7M2 679 aa15.77■□□□□ 0.12
PRPF40B-216ENST00000552301 TCEANCQ8N8B7 351 aa15.77■□□□□ 0.12
PRPF40B-216ENST00000552301 ST7LQ8TDW4 575 aa15.77■□□□□ 0.12
PRPF40B-216ENST00000552301 GTF3AQ92664 365 aaKnown RBP15.77■□□□□ 0.12
PRPF40B-216ENST00000552301 RDH5Q92781 318 aa15.77■□□□□ 0.12
PRPF40B-216ENST00000552301 DIRC2Q96SL1 478 aa15.77■□□□□ 0.12
PRPF40B-216ENST00000552301 KCNJ15Q99712 375 aa15.77■□□□□ 0.12
PRPF40B-216ENST00000552301 SMR3AQ99954 134 aa15.77■□□□□ 0.12
PRPF40B-216ENST00000552301 C9orf16Q9BUW7 83 aa15.77■□□□□ 0.12
PRPF40B-216ENST00000552301 ABHD6Q9BV23 337 aa15.77■□□□□ 0.12
PRPF40B-216ENST00000552301 EGLN1Q9GZT9 426 aa15.77■□□□□ 0.12
PRPF40B-216ENST00000552301 TOR3AQ9H497 397 aa15.77■□□□□ 0.12
PRPF40B-216ENST00000552301 GSX1Q9H4S2 264 aaPredicted RBP15.77■□□□□ 0.12
PRPF40B-216ENST00000552301 SAP30LQ9HAJ7 183 aa15.77■□□□□ 0.12
PRPF40B-216ENST00000552301 NKIRAS2Q9NYR9 191 aa15.77■□□□□ 0.12
PRPF40B-216ENST00000552301 CSPG4Q6UVK1 2322 aa15.76■□□□□ 0.11
PRPF40B-216ENST00000552301 ZSCAN5BA6NJL1 495 aa15.76■□□□□ 0.11
PRPF40B-216ENST00000552301 M0R129 80 aa15.76■□□□□ 0.11
PRPF40B-216ENST00000552301 NCR1O76036 304 aa15.76■□□□□ 0.11
PRPF40B-216ENST00000552301 LYNP07948 512 aa15.76■□□□□ 0.11
PRPF40B-216ENST00000552301 SLC2A5P22732 501 aa15.76■□□□□ 0.11
PRPF40B-216ENST00000552301 TNFSF4P23510 183 aa15.76■□□□□ 0.11
PRPF40B-216ENST00000552301 MMP15P51511 669 aa15.76■□□□□ 0.11
PRPF40B-216ENST00000552301 ALDH3A2P51648 485 aa15.76■□□□□ 0.11
PRPF40B-216ENST00000552301 GGTLC2Q14390 218 aa15.76■□□□□ 0.11
PRPF40B-216ENST00000552301 HLXQ14774 488 aaPredicted RBP15.76■□□□□ 0.11
PRPF40B-216ENST00000552301 ZSCAN26Q16670 478 aa15.76■□□□□ 0.11
PRPF40B-216ENST00000552301 RSPO1Q2MKA7 263 aaPredicted RBP15.76■□□□□ 0.11
PRPF40B-216ENST00000552301 FAM209AQ5JX71 171 aa15.76■□□□□ 0.11
PRPF40B-216ENST00000552301 FBXW12Q6X9E4 464 aa15.76■□□□□ 0.11
PRPF40B-216ENST00000552301 TMEM163Q8TC26 289 aa15.76■□□□□ 0.11
PRPF40B-216ENST00000552301 HAVCR1Q96D42 359 aa15.76■□□□□ 0.11
PRPF40B-216ENST00000552301 IL4I1Q96RQ9 567 aa15.76■□□□□ 0.11
PRPF40B-216ENST00000552301 MSL2Q9HCI7 577 aa15.76■□□□□ 0.11
PRPF40B-216ENST00000552301 USE1Q9NZ43 259 aa15.76■□□□□ 0.11
PRPF40B-216ENST00000552301 ZDHHC8Q9ULC8 765 aa15.76■□□□□ 0.11
PRPF40B-216ENST00000552301 SLC22A31A6NKX4 558 aa15.75■□□□□ 0.11
PRPF40B-216ENST00000552301 IGHV1-46P01743 117 aa15.75■□□□□ 0.11
PRPF40B-216ENST00000552301 APOC1P02654 83 aa15.75■□□□□ 0.11
PRPF40B-216ENST00000552301 ALPLP05186 524 aa15.75■□□□□ 0.11
PRPF40B-216ENST00000552301 H2BFMP0C1H6 154 aa15.75■□□□□ 0.11
PRPF40B-216ENST00000552301 SELEP16581 610 aa15.75■□□□□ 0.11
PRPF40B-216ENST00000552301 ACHEP22303 614 aa15.75■□□□□ 0.11
PRPF40B-216ENST00000552301 USF1P22415 310 aaPredicted RBP15.75■□□□□ 0.11
PRPF40B-216ENST00000552301 NR4A2P43354 598 aa15.75■□□□□ 0.11
PRPF40B-216ENST00000552301 CDC42P60953 191 aa15.75■□□□□ 0.11
PRPF40B-216ENST00000552301 MRPS11P82912 194 aaKnown RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms