RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 ITPKCQ96DU7 683 aa12.56□□□□□ -0.4
CACNB3-220ENST00000551716 CLPTM1LQ96KA5 538 aa12.56□□□□□ -0.4
CACNB3-220ENST00000551716 CPPED1Q9BRF8 314 aaPredicted RBP12.56□□□□□ -0.4
CACNB3-220ENST00000551716 HCAR1Q9BXC0 346 aa12.56□□□□□ -0.4
CACNB3-220ENST00000551716 TOR3AQ9H497 397 aa12.56□□□□□ -0.4
CACNB3-220ENST00000551716 FN3KRPQ9HA64 309 aa12.56□□□□□ -0.4
CACNB3-220ENST00000551716 SLC25A37Q9NYZ2 338 aa12.56□□□□□ -0.4
CACNB3-220ENST00000551716 PTTG3PQ9NZH4 202 aa12.56□□□□□ -0.4
CACNB3-220ENST00000551716 CTSZQ9UBR2 303 aa12.56□□□□□ -0.4
CACNB3-220ENST00000551716 ATPIF1Q9UII2 106 aa12.56□□□□□ -0.4
CACNB3-220ENST00000551716 SIGLEC9Q9Y336 463 aa12.56□□□□□ -0.4
CACNB3-220ENST00000551716 NOP16Q9Y3C1 178 aaKnown RBP12.56□□□□□ -0.4
CACNB3-220ENST00000551716 HTR3EA5X5Y0 456 aa12.55□□□□□ -0.4
CACNB3-220ENST00000551716 K7EIL1 84 aa12.55□□□□□ -0.4
CACNB3-220ENST00000551716 M0QX08 132 aa12.55□□□□□ -0.4
CACNB3-220ENST00000551716 FBP2O00757 339 aa12.55□□□□□ -0.4
CACNB3-220ENST00000551716 NPFFO15130 113 aa12.55□□□□□ -0.4
CACNB3-220ENST00000551716 CD200P41217 278 aa12.55□□□□□ -0.4
CACNB3-220ENST00000551716 MAB21L1Q13394 359 aa12.55□□□□□ -0.4
CACNB3-220ENST00000551716 OR8B8Q15620 311 aa12.55□□□□□ -0.4
CACNB3-220ENST00000551716 CLEC12AQ5QGZ9 265 aa12.55□□□□□ -0.4
CACNB3-220ENST00000551716 SFRP4Q6FHJ7 346 aaPredicted RBP12.55□□□□□ -0.4
CACNB3-220ENST00000551716 CCBE1Q6UXH8 406 aaPredicted RBP12.55□□□□□ -0.4
CACNB3-220ENST00000551716 PLPP7Q8NBV4 271 aa12.55□□□□□ -0.4
CACNB3-220ENST00000551716 C19orf18Q8NEA5 215 aa12.55□□□□□ -0.4
CACNB3-220ENST00000551716 OR1F12Q8NHA8 337 aa12.55□□□□□ -0.4
CACNB3-220ENST00000551716 PRSS27Q9BQR3 290 aa12.55□□□□□ -0.4
CACNB3-220ENST00000551716 RPUSD1Q9UJJ7 312 aaKnown RBP12.55□□□□□ -0.4
CACNB3-220ENST00000551716 MAB21L2Q9Y586 359 aa12.55□□□□□ -0.4
CACNB3-220ENST00000551716 DNAH3Q8TD57 4116 aa12.55□□□□□ -0.4
CACNB3-220ENST00000551716 POLR3GO15318 223 aaPredicted RBP12.54□□□□□ -0.4
CACNB3-220ENST00000551716 OR10H3O60404 316 aa12.54□□□□□ -0.4
CACNB3-220ENST00000551716 FBXO24O75426 580 aa12.54□□□□□ -0.4
CACNB3-220ENST00000551716 VSIG10L2P0DP72 767 aa12.54□□□□□ -0.4
CACNB3-220ENST00000551716 CD33P20138 364 aa12.54□□□□□ -0.4
CACNB3-220ENST00000551716 TOP3AQ13472 1001 aaPredicted RBP12.54□□□□□ -0.4
CACNB3-220ENST00000551716 AQP6Q13520 282 aa12.54□□□□□ -0.4
CACNB3-220ENST00000551716 RBM45Q8IUH3 476 aaKnown RBP12.54□□□□□ -0.4
CACNB3-220ENST00000551716 C10orf111Q8N326 155 aa12.54□□□□□ -0.4
CACNB3-220ENST00000551716 C11orf65Q8NCR3 313 aa12.54□□□□□ -0.4
CACNB3-220ENST00000551716 BHLHE23Q8NDY6 225 aa12.54□□□□□ -0.4
CACNB3-220ENST00000551716 OR9I1Q8NGQ6 314 aa12.54□□□□□ -0.4
CACNB3-220ENST00000551716 PPP1R35Q8TAP8 253 aa12.54□□□□□ -0.4
CACNB3-220ENST00000551716 LRRC8CQ8TDW0 803 aa12.54□□□□□ -0.4
CACNB3-220ENST00000551716 MAELQ96JY0 434 aaKnown RBP12.54□□□□□ -0.4
CACNB3-220ENST00000551716 ECSITQ9BQ95 431 aa12.54□□□□□ -0.4
CACNB3-220ENST00000551716 SLC22A4Q9H015 551 aa12.54□□□□□ -0.4
CACNB3-220ENST00000551716 MMP28Q9H239 520 aa12.54□□□□□ -0.4
CACNB3-220ENST00000551716 SMURF1Q9HCE7 757 aa12.54□□□□□ -0.4
CACNB3-220ENST00000551716 SSU72Q9NP77 194 aaKnown RBP12.54□□□□□ -0.4
CACNB3-220ENST00000551716 EMC7Q9NPA0 242 aa12.54□□□□□ -0.4
CACNB3-220ENST00000551716 OR6C6A6NF89 314 aa12.53□□□□□ -0.4
CACNB3-220ENST00000551716 OOEPA6NGQ2 149 aa12.53□□□□□ -0.4
CACNB3-220ENST00000551716 DVL1O14640 695 aa12.53□□□□□ -0.4
CACNB3-220ENST00000551716 AHCYL1O43865 530 aa12.53□□□□□ -0.4
CACNB3-220ENST00000551716 SHOX2O60902 331 aaPredicted RBP12.53□□□□□ -0.4
CACNB3-220ENST00000551716 PPP1R3DO95685 299 aa12.53□□□□□ -0.4
CACNB3-220ENST00000551716 HLA-DPB1P04440 258 aa12.53□□□□□ -0.4
CACNB3-220ENST00000551716 FAHP16930 419 aa12.53□□□□□ -0.4
CACNB3-220ENST00000551716 RAD23AP54725 363 aa12.53□□□□□ -0.4
CACNB3-220ENST00000551716 COL10A1Q03692 680 aa12.53□□□□□ -0.4
CACNB3-220ENST00000551716 ACSM1Q08AH1 577 aa12.53□□□□□ -0.4
CACNB3-220ENST00000551716 DCTN2Q13561 401 aaKnown RBP12.53□□□□□ -0.4
CACNB3-220ENST00000551716 PGBD2Q6P3X8 592 aa12.53□□□□□ -0.4
CACNB3-220ENST00000551716 MSRB3Q8IXL7 192 aa12.53□□□□□ -0.4
CACNB3-220ENST00000551716 BEND2Q8NDZ0 799 aa12.53□□□□□ -0.4
CACNB3-220ENST00000551716 GPR32P1Q8NGA4 272 aa12.53□□□□□ -0.4
CACNB3-220ENST00000551716 TMEM239Q8WW34 195 aa12.53□□□□□ -0.4
CACNB3-220ENST00000551716 POLR2J2Q9GZM3 115 aaKnown RBP12.53□□□□□ -0.4
CACNB3-220ENST00000551716 NPFFR1Q9GZQ6 430 aa12.53□□□□□ -0.4
CACNB3-220ENST00000551716 POLR2J3Q9H1A7 115 aaKnown RBP12.53□□□□□ -0.4
CACNB3-220ENST00000551716 SEMA6AQ9H2E6 1030 aa12.53□□□□□ -0.4
CACNB3-220ENST00000551716 UFSP2Q9NUQ7 469 aa12.53□□□□□ -0.4
CACNB3-220ENST00000551716 THAP1Q9NVV9 213 aa12.53□□□□□ -0.4
CACNB3-220ENST00000551716 ONECUT1Q9UBC0 465 aa12.53□□□□□ -0.4
CACNB3-220ENST00000551716 KAAG1Q9UBP8 84 aa12.53□□□□□ -0.4
CACNB3-220ENST00000551716 HIF3AQ9Y2N7 669 aa12.53□□□□□ -0.4
CACNB3-220ENST00000551716 MEIOCA2RUB1 952 aa12.52□□□□□ -0.41
CACNB3-220ENST00000551716 SCG5P05408 212 aa12.52□□□□□ -0.41
CACNB3-220ENST00000551716 CTXN1P60606 82 aa12.52□□□□□ -0.41
CACNB3-220ENST00000551716 LSM6P62312 80 aaKnown RBP12.52□□□□□ -0.41
CACNB3-220ENST00000551716 PATL1Q86TB9 770 aaKnown RBP12.52□□□□□ -0.41
CACNB3-220ENST00000551716 BOLLQ8N9W6 283 aaKnown RBP12.52□□□□□ -0.41
CACNB3-220ENST00000551716 PAPD5Q8NDF8 572 aaKnown RBP12.52□□□□□ -0.41
CACNB3-220ENST00000551716 LY6G5BQ8NDX9 201 aa12.52□□□□□ -0.41
CACNB3-220ENST00000551716 PFN4Q8NHR9 129 aa12.52□□□□□ -0.41
CACNB3-220ENST00000551716 RASSF5Q8WWW0 418 aa12.52□□□□□ -0.41
CACNB3-220ENST00000551716 SLC7A6Q92536 515 aa12.52□□□□□ -0.41
CACNB3-220ENST00000551716 B9D2Q9BPU9 175 aa12.52□□□□□ -0.41
CACNB3-220ENST00000551716 VAPAQ9P0L0 249 aa12.52□□□□□ -0.41
CACNB3-220ENST00000551716 SLAMF8Q9P0V8 285 aa12.52□□□□□ -0.41
CACNB3-220ENST00000551716 AURKCQ9UQB9 309 aa12.52□□□□□ -0.41
CACNB3-220ENST00000551716 MED31Q9Y3C7 131 aa12.52□□□□□ -0.41
CACNB3-220ENST00000551716 UBE2E1P51965 193 aa12.51□□□□□ -0.41
CACNB3-220ENST00000551716 STX1BP61266 288 aa12.51□□□□□ -0.41
CACNB3-220ENST00000551716 DOC2BQ14184 412 aa12.51□□□□□ -0.41
CACNB3-220ENST00000551716 MPPED2Q15777 294 aa12.51□□□□□ -0.41
CACNB3-220ENST00000551716 AANATQ16613 207 aa12.51□□□□□ -0.41
CACNB3-220ENST00000551716 ANKDD1AQ495B1 522 aa12.51□□□□□ -0.41
CACNB3-220ENST00000551716 KLHL22Q53GT1 634 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms