RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 TRBC1P01850 177 aa4.03□□□□□ -1.76
CPSF6-206ENST00000550987 FTH1P02794 183 aa4.03□□□□□ -1.76
CPSF6-206ENST00000550987 KLK3P07288 261 aaPredicted RBP4.03□□□□□ -1.76
CPSF6-206ENST00000550987 CRYGCP07315 174 aa4.03□□□□□ -1.76
CPSF6-206ENST00000550987 ATP6V1B2P21281 511 aa4.03□□□□□ -1.76
CPSF6-206ENST00000550987 MSR1P21757 451 aa4.03□□□□□ -1.76
CPSF6-206ENST00000550987 GSSP48637 474 aa4.03□□□□□ -1.76
CPSF6-206ENST00000550987 P2RY4P51582 365 aa4.03□□□□□ -1.76
CPSF6-206ENST00000550987 ARPC4P59998 168 aa4.03□□□□□ -1.76
CPSF6-206ENST00000550987 PLP1P60201 277 aa4.03□□□□□ -1.76
CPSF6-206ENST00000550987 YWHAGP61981 247 aaKnown RBP eCLIP4.03□□□□□ -1.76
CPSF6-206ENST00000550987 GRB7Q14451 532 aa4.03□□□□□ -1.76
CPSF6-206ENST00000550987 MICBQ29980 383 aa4.03□□□□□ -1.76
CPSF6-206ENST00000550987 RGS21Q2M5E4 152 aa4.03□□□□□ -1.76
CPSF6-206ENST00000550987 VPS26BQ4G0F5 336 aa4.03□□□□□ -1.76
CPSF6-206ENST00000550987 FAM78AQ5JUQ0 283 aa4.03□□□□□ -1.76
CPSF6-206ENST00000550987 PIP5KL1Q5T9C9 394 aa4.03□□□□□ -1.76
CPSF6-206ENST00000550987 CLEC6AQ6EIG7 209 aa4.03□□□□□ -1.76
CPSF6-206ENST00000550987 ZNF571Q7Z3V5 609 aaPredicted RBP4.03□□□□□ -1.76
CPSF6-206ENST00000550987 ACOT4Q8N9L9 421 aa4.03□□□□□ -1.76
CPSF6-206ENST00000550987 OR4F6Q8NGB9 312 aa4.03□□□□□ -1.76
CPSF6-206ENST00000550987 SLC25A38Q96DW6 304 aa4.03□□□□□ -1.76
CPSF6-206ENST00000550987 PAGE5Q96GU1 130 aa4.03□□□□□ -1.76
CPSF6-206ENST00000550987 TECTBQ96PL2 329 aa4.03□□□□□ -1.76
CPSF6-206ENST00000550987 RANBP9Q96S59 729 aa4.03□□□□□ -1.76
CPSF6-206ENST00000550987 HDHD2Q9H0R4 259 aa4.03□□□□□ -1.76
CPSF6-206ENST00000550987 NARFLQ9H6Q4 476 aa4.03□□□□□ -1.76
CPSF6-206ENST00000550987 NIPAL2Q9H841 368 aa4.03□□□□□ -1.76
CPSF6-206ENST00000550987 FOLH1BQ9HBA9 442 aa4.03□□□□□ -1.76
CPSF6-206ENST00000550987 TREM1Q9NP99 234 aa4.03□□□□□ -1.76
CPSF6-206ENST00000550987 CHRAC1Q9NRG0 131 aa4.03□□□□□ -1.76
CPSF6-206ENST00000550987 NRBP2Q9NSY0 501 aa4.03□□□□□ -1.76
CPSF6-206ENST00000550987 SLC39A1Q9NY26 324 aa4.03□□□□□ -1.76
CPSF6-206ENST00000550987 TREM2Q9NZC2 230 aa4.03□□□□□ -1.76
CPSF6-206ENST00000550987 KLHL21Q9UJP4 597 aa4.03□□□□□ -1.76
CPSF6-206ENST00000550987 NUP50Q9UKX7 468 aa4.03□□□□□ -1.76
CPSF6-206ENST00000550987 STAP1Q9ULZ2 295 aa4.03□□□□□ -1.76
CPSF6-206ENST00000550987 CSDC2Q9Y534 153 aaKnown RBP4.03□□□□□ -1.76
CPSF6-206ENST00000550987 FRAS1Q86XX4 4008 aa4.03□□□□□ -1.76
CPSF6-206ENST00000550987 ANK1P16157 1881 aa4.03□□□□□ -1.77
CPSF6-206ENST00000550987 IGLV8-61A0A075B6I0 122 aa4.02□□□□□ -1.77
CPSF6-206ENST00000550987 IGHV3-35A0A0C4DH35 117 aa4.02□□□□□ -1.77
CPSF6-206ENST00000550987 ARL5CA6NH57 179 aa4.02□□□□□ -1.77
CPSF6-206ENST00000550987 TUBAL3A6NHL2 446 aa4.02□□□□□ -1.77
CPSF6-206ENST00000550987 OR5B21A6NL26 309 aa4.02□□□□□ -1.77
CPSF6-206ENST00000550987 K7EM74 188 aa4.02□□□□□ -1.77
CPSF6-206ENST00000550987 HSD17B6O14756 317 aa4.02□□□□□ -1.77
CPSF6-206ENST00000550987 DNAJB6O75190 326 aa4.02□□□□□ -1.77
CPSF6-206ENST00000550987 PLEKHA8P1O95397 391 aa4.02□□□□□ -1.77
CPSF6-206ENST00000550987 LDOC1O95751 146 aaPredicted RBP4.02□□□□□ -1.77
CPSF6-206ENST00000550987 HTR1EP28566 365 aa4.02□□□□□ -1.77
CPSF6-206ENST00000550987 HOXA9P31269 272 aa4.02□□□□□ -1.77
CPSF6-206ENST00000550987 FDFT1P37268 417 aa4.02□□□□□ -1.77
CPSF6-206ENST00000550987 DDOSTP39656 456 aa4.02□□□□□ -1.77
CPSF6-206ENST00000550987 OPRD1P41143 372 aa4.02□□□□□ -1.77
CPSF6-206ENST00000550987 OR3A4PP47883 348 aa4.02□□□□□ -1.77
CPSF6-206ENST00000550987 VEGFCP49767 419 aa4.02□□□□□ -1.77
CPSF6-206ENST00000550987 CDH6P55285 790 aa4.02□□□□□ -1.77
CPSF6-206ENST00000550987 DSTNP60981 165 aa4.02□□□□□ -1.77
CPSF6-206ENST00000550987 B2MP61769 119 aa4.02□□□□□ -1.77
CPSF6-206ENST00000550987 YWHAEP62258 255 aaKnown RBP4.02□□□□□ -1.77
CPSF6-206ENST00000550987 KCNJ2P63252 427 aa4.02□□□□□ -1.77
CPSF6-206ENST00000550987 PPIDQ08752 370 aaKnown RBP4.02□□□□□ -1.77
CPSF6-206ENST00000550987 ILKQ13418 452 aa4.02□□□□□ -1.77
CPSF6-206ENST00000550987 ZNF630Q2M218 657 aaPredicted RBP4.02□□□□□ -1.77
CPSF6-206ENST00000550987 NSUN5P1Q3KNT7 163 aa4.02□□□□□ -1.77
CPSF6-206ENST00000550987 OR2B11Q5JQS5 317 aa4.02□□□□□ -1.77
CPSF6-206ENST00000550987 ATAD3CQ5T2N8 411 aa4.02□□□□□ -1.77
CPSF6-206ENST00000550987 LRRC66Q68CR7 880 aa4.02□□□□□ -1.77
CPSF6-206ENST00000550987 WDR74Q6RFH5 385 aaPredicted RBP4.02□□□□□ -1.77
CPSF6-206ENST00000550987 Q6ZN92 141 aa4.02□□□□□ -1.77
CPSF6-206ENST00000550987 EIF3MQ7L2H7 374 aaKnown RBP4.02□□□□□ -1.77
CPSF6-206ENST00000550987 MOB1BQ7L9L4 216 aa4.02□□□□□ -1.77
CPSF6-206ENST00000550987 NIPA1Q7RTP0 329 aa4.02□□□□□ -1.77
CPSF6-206ENST00000550987 PLA2G4DQ86XP0 818 aa4.02□□□□□ -1.77
CPSF6-206ENST00000550987 FNDC5Q8NAU1 212 aa4.02□□□□□ -1.77
CPSF6-206ENST00000550987 BPIFCQ8NFQ6 507 aa4.02□□□□□ -1.77
CPSF6-206ENST00000550987 KIFAP3Q92845 792 aa4.02□□□□□ -1.77
CPSF6-206ENST00000550987 TCEAL4Q96EI5 215 aa4.02□□□□□ -1.77
CPSF6-206ENST00000550987 CHMP6Q96FZ7 201 aa4.02□□□□□ -1.77
CPSF6-206ENST00000550987 SIGLEC12Q96PQ1 595 aa4.02□□□□□ -1.77
CPSF6-206ENST00000550987 LYSTQ99698 3801 aa4.02□□□□□ -1.77
CPSF6-206ENST00000550987 MRPL45Q9BRJ2 306 aaKnown RBP4.02□□□□□ -1.77
CPSF6-206ENST00000550987 ACTR6Q9GZN1 396 aa4.02□□□□□ -1.77
CPSF6-206ENST00000550987 GFRA4Q9GZZ7 299 aa4.02□□□□□ -1.77
CPSF6-206ENST00000550987 TMEM185BQ9H7F4 350 aa4.02□□□□□ -1.77
CPSF6-206ENST00000550987 PTGES2Q9H7Z7 377 aa4.02□□□□□ -1.77
CPSF6-206ENST00000550987 FKBP14Q9NWM8 211 aa4.02□□□□□ -1.77
CPSF6-206ENST00000550987 ABCD2Q9UBJ2 740 aa4.02□□□□□ -1.77
CPSF6-206ENST00000550987 PITPNC1Q9UKF7 332 aa4.02□□□□□ -1.77
CPSF6-206ENST00000550987 BZW2Q9Y6E2 419 aaKnown RBP4.02□□□□□ -1.77
CPSF6-206ENST00000550987 IGKV6-21A0A0C4DH24 114 aa4.01□□□□□ -1.77
CPSF6-206ENST00000550987 TMEM150BA6NC51 233 aa4.01□□□□□ -1.77
CPSF6-206ENST00000550987 KRTAP16-1A8MUX0 517 aa4.01□□□□□ -1.77
CPSF6-206ENST00000550987 ZNF701M0R085 212 aaPredicted RBP4.01□□□□□ -1.77
CPSF6-206ENST00000550987 DYNC1I1O14576 645 aa4.01□□□□□ -1.77
CPSF6-206ENST00000550987 ZW10O43264 779 aa4.01□□□□□ -1.77
CPSF6-206ENST00000550987 ZNF354AO60765 605 aaPredicted RBP4.01□□□□□ -1.77
CPSF6-206ENST00000550987 CBR3O75828 277 aa4.01□□□□□ -1.77
CPSF6-206ENST00000550987 TMEM50AO95807 157 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms