RNA–Protein interactions for RNA: ENST00000550589.1

CCDC59-204, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-204ENST00000550589 EMC9Q9Y3B6 208 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 U3KQ87 197 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 SPTBN5Q9NRC6 3674 aaKnown RBP3.88□□□□□ -1.79
CCDC59-204ENST00000550589 TRAV8-7A0A075B6U6 113 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 IGHV3-20A0A0C4DH32 117 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 LOC390937A0A1W2PQ73 354 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 TMEM200CA6NKL6 621 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 ZNF736B4DX44 427 aaPredicted RBP3.88□□□□□ -1.79
CCDC59-204ENST00000550589 SULT2B1O00204 365 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 ARPC1BO15143 372 aaKnown RBP3.88□□□□□ -1.79
CCDC59-204ENST00000550589 DNPH1O43598 174 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 MTRF1O75570 445 aaKnown RBP3.88□□□□□ -1.79
CCDC59-204ENST00000550589 OR2J2O76002 312 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 RAB3DO95716 219 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 RLN1P04808 185 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 IFNA6P05013 189 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 CFIP05156 583 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 TPOP07202 933 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 DCNP07585 359 aaKnown RBP3.88□□□□□ -1.79
CCDC59-204ENST00000550589 ITGA5P08648 1049 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 UBBP0CG47 229 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 TBPP20226 339 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 NFYAP23511 347 aaPredicted RBP3.88□□□□□ -1.79
CCDC59-204ENST00000550589 PTGS2P35354 604 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 VEGFCP49767 419 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 ZNF81P51508 661 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 BIDP55957 195 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 DSCR4P56555 118 aaPredicted RBP3.88□□□□□ -1.79
CCDC59-204ENST00000550589 CCL7P80098 99 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 FOXF1Q12946 379 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 MYBPHQ13203 477 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 EIF3IQ13347 325 aaKnown RBP3.88□□□□□ -1.79
CCDC59-204ENST00000550589 CAMK2DQ13557 499 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 ST3GAL2Q16842 350 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 C4orf46Q504U0 113 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 ZNF626Q68DY1 528 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 GUSBP11Q6P575 273 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 DBX2Q6ZNG2 339 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 UTS2BQ765I0 119 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 GPAT4Q86UL3 456 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 WDR5BQ86VZ2 330 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 OR8H3Q8N146 312 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 C9orf62Q8N4C0 152 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 TMEM156Q8N614 296 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 TMEM229BQ8NBD8 167 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 OR11G2Q8NGC1 345 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 OR11H7Q8NGC8 314 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 IFI44Q8TCB0 444 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 ELP5Q8TE02 316 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 TMEM131Q92545 1883 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 PIGKQ92643 395 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 FAM46BQ96A09 425 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 C10orf35Q96D05 121 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 SLAMF6Q96DU3 332 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 ARL5BQ96KC2 179 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 SGCZQ96LD1 299 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 OR5B2Q96R09 309 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 S100A13Q99584 98 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 ZPBPQ9BS86 351 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 URM1Q9BTM9 101 aaKnown RBP3.88□□□□□ -1.79
CCDC59-204ENST00000550589 RTN4RQ9BZR6 473 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 B3GNT4Q9C0J1 378 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 PRDM14Q9GZV8 571 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 GAREM1Q9H706 876 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 METTL17Q9H7H0 456 aaPredicted RBP3.88□□□□□ -1.79
CCDC59-204ENST00000550589 SEC61A2Q9H9S3 476 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 TMEM165Q9HC07 324 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 PRMT8Q9NR22 394 aaPredicted RBP3.88□□□□□ -1.79
CCDC59-204ENST00000550589 DLL4Q9NR61 685 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 MGAT4CQ9UBM8 478 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 CYB5R1Q9UHQ9 305 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 PILRBQ9UKJ0 227 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 NPTNQ9Y639 398 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 SESN1Q9Y6P5 492 aa3.88□□□□□ -1.79
CCDC59-204ENST00000550589 UNC80Q8N2C7 3258 aa3.87□□□□□ -1.79
CCDC59-204ENST00000550589 LOC102723996A0A087X1L8 192 aa3.87□□□□□ -1.79
CCDC59-204ENST00000550589 LOC107986453A0A1B0GWG9 222 aa3.87□□□□□ -1.79
CCDC59-204ENST00000550589 A0A1W2PPL8 197 aa3.87□□□□□ -1.79
CCDC59-204ENST00000550589 A0A1W2PQM1 296 aa3.87□□□□□ -1.79
CCDC59-204ENST00000550589 HMSDA8MTL9 139 aa3.87□□□□□ -1.79
CCDC59-204ENST00000550589 NPIPA2E9PIF3 369 aa3.87□□□□□ -1.79
CCDC59-204ENST00000550589 NPIPA3F8WFD2 350 aa3.87□□□□□ -1.79
CCDC59-204ENST00000550589 L7N2F9 121 aa3.87□□□□□ -1.79
CCDC59-204ENST00000550589 GMDSO60547 372 aa3.87□□□□□ -1.79
CCDC59-204ENST00000550589 CBR3O75828 277 aa3.87□□□□□ -1.79
CCDC59-204ENST00000550589 CD37P11049 281 aa3.87□□□□□ -1.79
CCDC59-204ENST00000550589 FOSL2P15408 326 aa3.87□□□□□ -1.79
CCDC59-204ENST00000550589 IGFBP3P17936 291 aaPredicted RBP3.87□□□□□ -1.79
CCDC59-204ENST00000550589 ADRA2CP18825 462 aa3.87□□□□□ -1.79
CCDC59-204ENST00000550589 ZNF93P35789 620 aaPredicted RBP3.87□□□□□ -1.79
CCDC59-204ENST00000550589 RPS27P42677 84 aaKnown RBP3.87□□□□□ -1.79
CCDC59-204ENST00000550589 KIR3DL2P43630 455 aa3.87□□□□□ -1.79
CCDC59-204ENST00000550589 CBX5P45973 191 aa3.87□□□□□ -1.79
CCDC59-204ENST00000550589 ZNF84P51523 738 aa3.87□□□□□ -1.79
CCDC59-204ENST00000550589 SSR4P51571 173 aa3.87□□□□□ -1.79
CCDC59-204ENST00000550589 PER3P56645 1201 aa3.87□□□□□ -1.79
CCDC59-204ENST00000550589 TSPAN5P62079 268 aa3.87□□□□□ -1.79
CCDC59-204ENST00000550589 LSM6P62312 80 aaKnown RBP3.87□□□□□ -1.79
CCDC59-204ENST00000550589 DBPQ10586 325 aaPredicted RBP3.87□□□□□ -1.79
CCDC59-204ENST00000550589 ZNF239Q16600 458 aaKnown RBP3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms