RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 BHLHE23Q8NDY6 225 aa12.29□□□□□ -0.44
HDAC7-228ENST00000548938 SLC25A36Q96CQ1 311 aa12.29□□□□□ -0.44
HDAC7-228ENST00000548938 RNF126Q9BV68 326 aa12.29□□□□□ -0.44
HDAC7-228ENST00000548938 RHBDD3Q9Y3P4 386 aa12.29□□□□□ -0.44
HDAC7-228ENST00000548938 IGLV1-36A0A0B4J1U3 117 aa12.28□□□□□ -0.44
HDAC7-228ENST00000548938 LOC101059948A0A1B0GTJ6 334 aa12.28□□□□□ -0.44
HDAC7-228ENST00000548938 MSGN1A6NI15 193 aa12.28□□□□□ -0.44
HDAC7-228ENST00000548938 H0YIZ8 118 aa12.28□□□□□ -0.44
HDAC7-228ENST00000548938 EIF1AYO14602 144 aaKnown RBP12.28□□□□□ -0.44
HDAC7-228ENST00000548938 BGLAPP02818 100 aa12.28□□□□□ -0.44
HDAC7-228ENST00000548938 ABOP16442 354 aa12.28□□□□□ -0.44
HDAC7-228ENST00000548938 EIF1AXP47813 144 aaKnown RBP12.28□□□□□ -0.44
HDAC7-228ENST00000548938 IGLV3-21P80748 117 aaPredicted RBP12.28□□□□□ -0.44
HDAC7-228ENST00000548938 BIKQ13323 160 aa12.28□□□□□ -0.44
HDAC7-228ENST00000548938 TOMM34Q15785 309 aaPredicted RBP12.28□□□□□ -0.44
HDAC7-228ENST00000548938 PHF19Q5T6S3 580 aa12.28□□□□□ -0.44
HDAC7-228ENST00000548938 KCTD18Q6PI47 426 aaPredicted RBP12.28□□□□□ -0.44
HDAC7-228ENST00000548938 PARGQ86W56 976 aa12.28□□□□□ -0.44
HDAC7-228ENST00000548938 FAM219AQ8IW50 185 aa12.28□□□□□ -0.44
HDAC7-228ENST00000548938 ZNF321PQ8N8H1 164 aa12.28□□□□□ -0.44
HDAC7-228ENST00000548938 DMBX1Q8NFW5 382 aa12.28□□□□□ -0.44
HDAC7-228ENST00000548938 FAM131CQ96AQ9 280 aa12.28□□□□□ -0.44
HDAC7-228ENST00000548938 SEC11CQ9BY50 192 aa12.28□□□□□ -0.44
HDAC7-228ENST00000548938 HHLA2Q9UM44 414 aa12.28□□□□□ -0.44
HDAC7-228ENST00000548938 SPEGQ15772 3267 aa12.28□□□□□ -0.44
HDAC7-228ENST00000548938 ZNF705EA8MWA4 302 aaPredicted RBP12.28□□□□□ -0.44
HDAC7-228ENST00000548938 UTS2O95399 124 aa12.28□□□□□ -0.44
HDAC7-228ENST00000548938 DUS4LO95620 317 aaKnown RBP12.28□□□□□ -0.44
HDAC7-228ENST00000548938 FAM157CP0CG43 387 aa12.28□□□□□ -0.44
HDAC7-228ENST00000548938 GFOD2Q3B7J2 385 aa12.28□□□□□ -0.44
HDAC7-228ENST00000548938 GABRG3Q99928 467 aa12.28□□□□□ -0.44
HDAC7-228ENST00000548938 NRIP2Q9BQI9 281 aa12.28□□□□□ -0.44
HDAC7-228ENST00000548938 MRPS33Q9Y291 106 aaKnown RBP12.28□□□□□ -0.44
HDAC7-228ENST00000548938 NOSIPQ9Y314 301 aaKnown RBP12.28□□□□□ -0.44
HDAC7-228ENST00000548938 FREM3P0C091 2139 aa12.28□□□□□ -0.44
HDAC7-228ENST00000548938 A0A1W2PQF6 199 aa12.27□□□□□ -0.44
HDAC7-228ENST00000548938 DBX1A6NMT0 343 aa12.27□□□□□ -0.44
HDAC7-228ENST00000548938 EIF3GO75821 320 aaKnown RBP eCLIP12.27□□□□□ -0.44
HDAC7-228ENST00000548938 MUC1P15941 1255 aaPredicted RBP12.27□□□□□ -0.44
HDAC7-228ENST00000548938 MPZP25189 248 aa12.27□□□□□ -0.44
HDAC7-228ENST00000548938 PJVKQ0ZLH3 352 aa12.27□□□□□ -0.44
HDAC7-228ENST00000548938 UNC119Q13432 240 aa12.27□□□□□ -0.44
HDAC7-228ENST00000548938 TMEM31Q5JXX7 168 aa12.27□□□□□ -0.44
HDAC7-228ENST00000548938 C1orf100Q5SVJ3 147 aa12.27□□□□□ -0.44
HDAC7-228ENST00000548938 PGAP1Q75T13 922 aa12.27□□□□□ -0.44
HDAC7-228ENST00000548938 LYPD6Q86Y78 171 aa12.27□□□□□ -0.44
HDAC7-228ENST00000548938 PRR22Q8IZ63 422 aa12.27□□□□□ -0.44
HDAC7-228ENST00000548938 ZNF519Q8TB69 540 aa12.27□□□□□ -0.44
HDAC7-228ENST00000548938 MARCH1Q8TCQ1 289 aa12.27□□□□□ -0.44
HDAC7-228ENST00000548938 CRB3Q9BUF7 120 aa12.27□□□□□ -0.44
HDAC7-228ENST00000548938 HRH4Q9H3N8 390 aa12.27□□□□□ -0.44
HDAC7-228ENST00000548938 CNTD2Q9H8S5 307 aa12.27□□□□□ -0.44
HDAC7-228ENST00000548938 SLC22A11Q9NSA0 550 aa12.27□□□□□ -0.44
HDAC7-228ENST00000548938 MTCH2Q9Y6C9 303 aa12.27□□□□□ -0.44
HDAC7-228ENST00000548938 TRBV6-7A0A0A0MS04 114 aa12.27□□□□□ -0.45
HDAC7-228ENST00000548938 LOC390937A0A1W2PQ73 354 aa12.27□□□□□ -0.45
HDAC7-228ENST00000548938 MEGF11A6BM72 1044 aa12.27□□□□□ -0.45
HDAC7-228ENST00000548938 NUDT21O43809 227 aaKnown RBP12.27□□□□□ -0.45
HDAC7-228ENST00000548938 HOXC4P09017 264 aaPredicted RBP12.27□□□□□ -0.45
HDAC7-228ENST00000548938 ACAA1P09110 424 aaPredicted RBP12.27□□□□□ -0.45
HDAC7-228ENST00000548938 GNB3P16520 340 aa12.27□□□□□ -0.45
HDAC7-228ENST00000548938 COL9A1P20849 921 aa12.27□□□□□ -0.45
HDAC7-228ENST00000548938 RPL27P61353 136 aaKnown RBP12.27□□□□□ -0.45
HDAC7-228ENST00000548938 NAAAQ02083 359 aa12.27□□□□□ -0.45
HDAC7-228ENST00000548938 FAHD2BQ6P2I3 314 aaPredicted RBP12.27□□□□□ -0.45
HDAC7-228ENST00000548938 OR52N5Q8NH56 324 aa12.27□□□□□ -0.45
HDAC7-228ENST00000548938 FAHD2AQ96GK7 314 aa12.27□□□□□ -0.45
HDAC7-228ENST00000548938 NXF5Q9H1B4 397 aaKnown RBP12.27□□□□□ -0.45
HDAC7-228ENST00000548938 PRR13Q9NZ81 148 aa12.27□□□□□ -0.45
HDAC7-228ENST00000548938 KNL1Q8NG31 2342 aa12.27□□□□□ -0.45
HDAC7-228ENST00000548938 METTL21EPA6NDL7 271 aa12.26□□□□□ -0.45
HDAC7-228ENST00000548938 SRSF10O75494 262 aaKnown RBP12.26□□□□□ -0.45
HDAC7-228ENST00000548938 PMP2P02689 132 aa12.26□□□□□ -0.45
HDAC7-228ENST00000548938 CELA2BP08218 269 aaPredicted RBP12.26□□□□□ -0.45
HDAC7-228ENST00000548938 NR0B1P51843 470 aaKnown RBP12.26□□□□□ -0.45
HDAC7-228ENST00000548938 ZNF117Q03924 483 aa12.26□□□□□ -0.45
HDAC7-228ENST00000548938 PNLIPRP3Q17RR3 467 aa12.26□□□□□ -0.45
HDAC7-228ENST00000548938 SWI5Q1ZZU3 235 aa12.26□□□□□ -0.45
HDAC7-228ENST00000548938 TMEM200AQ86VY9 491 aa12.26□□□□□ -0.45
HDAC7-228ENST00000548938 SLC37A2Q8TED4 501 aa12.26□□□□□ -0.45
HDAC7-228ENST00000548938 ADAM19Q9H013 955 aa12.26□□□□□ -0.45
HDAC7-228ENST00000548938 TCEAL2Q9H3H9 227 aaPredicted RBP12.26□□□□□ -0.45
HDAC7-228ENST00000548938 OR2S2Q9NQN1 319 aa12.26□□□□□ -0.45
HDAC7-228ENST00000548938 RCC2Q9P258 522 aaKnown RBP12.26□□□□□ -0.45
HDAC7-228ENST00000548938 LPAR3Q9UBY5 353 aa12.26□□□□□ -0.45
HDAC7-228ENST00000548938 R4GMQ9 66 aa12.26□□□□□ -0.45
HDAC7-228ENST00000548938 HCRTR2O43614 444 aa12.26□□□□□ -0.45
HDAC7-228ENST00000548938 KLF8O95600 359 aaPredicted RBP12.26□□□□□ -0.45
HDAC7-228ENST00000548938 IFNA4P05014 189 aa12.26□□□□□ -0.45
HDAC7-228ENST00000548938 HEXAP06865 529 aa12.26□□□□□ -0.45
HDAC7-228ENST00000548938 CXCR1P25024 350 aa12.26□□□□□ -0.45
HDAC7-228ENST00000548938 PTGFRP43088 359 aa12.26□□□□□ -0.45
HDAC7-228ENST00000548938 TFF2Q03403 129 aa12.26□□□□□ -0.45
HDAC7-228ENST00000548938 ZP2Q05996 745 aa12.26□□□□□ -0.45
HDAC7-228ENST00000548938 ZNF585AQ6P3V2 769 aa12.26□□□□□ -0.45
HDAC7-228ENST00000548938 IL34Q6ZMJ4 242 aa12.26□□□□□ -0.45
HDAC7-228ENST00000548938 OOSP2Q86WS3 158 aa12.26□□□□□ -0.45
HDAC7-228ENST00000548938 PTX4Q96A99 478 aa12.26□□□□□ -0.45
HDAC7-228ENST00000548938 ADOQ96SZ5 270 aa12.26□□□□□ -0.45
HDAC7-228ENST00000548938 RHOFQ9HBH0 211 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms