RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 ARL9Q6T311 187 aa18.18■□□□□ 0.5
CACNB3-210ENST00000548874 DRAM2Q6UX65 266 aa18.18■□□□□ 0.5
CACNB3-210ENST00000548874 RFPL4BQ6ZWI9 263 aa18.18■□□□□ 0.5
CACNB3-210ENST00000548874 AKAP1Q92667 903 aaKnown RBP eCLIP18.18■□□□□ 0.5
CACNB3-210ENST00000548874 C1QTNF5Q9BXJ0 243 aa18.18■□□□□ 0.5
CACNB3-210ENST00000548874 ERVK13-1Q9NX77 482 aa18.18■□□□□ 0.5
CACNB3-210ENST00000548874 POU2F3Q9UKI9 436 aa18.18■□□□□ 0.5
CACNB3-210ENST00000548874 IKZF2Q9UKS7 526 aa18.18■□□□□ 0.5
CACNB3-210ENST00000548874 ATP23Q9Y6H3 246 aa18.18■□□□□ 0.5
CACNB3-210ENST00000548874 MAGEB4O15481 346 aaPredicted RBP18.17■□□□□ 0.5
CACNB3-210ENST00000548874 SULT1C4O75897 302 aa18.17■□□□□ 0.5
CACNB3-210ENST00000548874 NGFP01138 241 aa18.17■□□□□ 0.5
CACNB3-210ENST00000548874 PRF1P14222 555 aa18.17■□□□□ 0.5
CACNB3-210ENST00000548874 CRHBPP24387 322 aa18.17■□□□□ 0.5
CACNB3-210ENST00000548874 HSD11B1P28845 292 aa18.17■□□□□ 0.5
CACNB3-210ENST00000548874 GLRXP35754 106 aa18.17■□□□□ 0.5
CACNB3-210ENST00000548874 RAD52P43351 418 aa18.17■□□□□ 0.5
CACNB3-210ENST00000548874 ST3GAL4Q11206 333 aa18.17■□□□□ 0.5
CACNB3-210ENST00000548874 MED21Q13503 144 aa18.17■□□□□ 0.5
CACNB3-210ENST00000548874 GALEQ14376 348 aa18.17■□□□□ 0.5
CACNB3-210ENST00000548874 CDONQ4KMG0 1287 aa18.17■□□□□ 0.5
CACNB3-210ENST00000548874 AHSA2Q719I0 299 aa18.17■□□□□ 0.5
CACNB3-210ENST00000548874 PRSS45Q7RTY3 260 aa18.17■□□□□ 0.5
CACNB3-210ENST00000548874 NAA40Q86UY6 237 aa18.17■□□□□ 0.5
CACNB3-210ENST00000548874 TMEM200AQ86VY9 491 aa18.17■□□□□ 0.5
CACNB3-210ENST00000548874 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.17■□□□□ 0.5
CACNB3-210ENST00000548874 ZNF540Q8NDQ6 660 aa18.17■□□□□ 0.5
CACNB3-210ENST00000548874 TMEM171Q8WVE6 324 aa18.17■□□□□ 0.5
CACNB3-210ENST00000548874 TMEM80Q96HE8 168 aa18.17■□□□□ 0.5
CACNB3-210ENST00000548874 DOK1Q99704 481 aa18.17■□□□□ 0.5
CACNB3-210ENST00000548874 BCL2L14Q9BZR8 327 aa18.17■□□□□ 0.5
CACNB3-210ENST00000548874 ZNF442Q9H7R0 627 aa18.17■□□□□ 0.5
CACNB3-210ENST00000548874 PLEKHF2Q9H8W4 249 aa18.17■□□□□ 0.5
CACNB3-210ENST00000548874 CA10Q9NS85 328 aa18.17■□□□□ 0.5
CACNB3-210ENST00000548874 SCN3BQ9NY72 215 aa18.17■□□□□ 0.5
CACNB3-210ENST00000548874 HECTD1Q9ULT8 2610 aa18.17■□□□□ 0.5
CACNB3-210ENST00000548874 HS3ST1O14792 307 aa18.16■□□□□ 0.5
CACNB3-210ENST00000548874 GPRIN2O60269 458 aa18.16■□□□□ 0.5
CACNB3-210ENST00000548874 APOC1P02654 83 aa18.16■□□□□ 0.5
CACNB3-210ENST00000548874 KRT8P05787 483 aa18.16■□□□□ 0.5
CACNB3-210ENST00000548874 LIMS3P0CW19 117 aa18.16■□□□□ 0.5
CACNB3-210ENST00000548874 LIMS4P0CW20 117 aa18.16■□□□□ 0.5
CACNB3-210ENST00000548874 ANOS1P23352 680 aa18.16■□□□□ 0.5
CACNB3-210ENST00000548874 CX3CR1P49238 355 aa18.16■□□□□ 0.5
CACNB3-210ENST00000548874 RIDAP52758 137 aaKnown RBP18.16■□□□□ 0.5
CACNB3-210ENST00000548874 PSMA6P60900 246 aaKnown RBP18.16■□□□□ 0.5
CACNB3-210ENST00000548874 SLC35A2P78381 396 aa18.16■□□□□ 0.5
CACNB3-210ENST00000548874 MVKQ03426 396 aa18.16■□□□□ 0.5
CACNB3-210ENST00000548874 RBM48Q5RL73 367 aaKnown RBP18.16■□□□□ 0.5
CACNB3-210ENST00000548874 UNQ6126/PRO20091Q6UXV3 157 aa18.16■□□□□ 0.5
CACNB3-210ENST00000548874 PLEKHG7Q6ZR37 379 aa18.16■□□□□ 0.5
CACNB3-210ENST00000548874 LHFPL3Q86UP9 236 aa18.16■□□□□ 0.5
CACNB3-210ENST00000548874 C1orf174Q8IYL3 243 aa18.16■□□□□ 0.5
CACNB3-210ENST00000548874 ZNF786Q8N393 782 aa18.16■□□□□ 0.5
CACNB3-210ENST00000548874 ZNF283Q8N7M2 679 aa18.16■□□□□ 0.5
CACNB3-210ENST00000548874 ABHD4Q8TB40 342 aa18.16■□□□□ 0.5
CACNB3-210ENST00000548874 SNX33Q8WV41 574 aa18.16■□□□□ 0.5
CACNB3-210ENST00000548874 APOBEC3DQ96AK3 386 aaPredicted RBP18.16■□□□□ 0.5
CACNB3-210ENST00000548874 OR51B6Q9H340 312 aa18.16■□□□□ 0.5
CACNB3-210ENST00000548874 DUSP21Q9H596 190 aa18.16■□□□□ 0.5
CACNB3-210ENST00000548874 PAK1IP1Q9NWT1 392 aaPredicted RBP18.16■□□□□ 0.5
CACNB3-210ENST00000548874 CISD1Q9NZ45 108 aaKnown RBP18.16■□□□□ 0.5
CACNB3-210ENST00000548874 TPRKBQ9Y3C4 175 aa18.16■□□□□ 0.5
CACNB3-210ENST00000548874 PLCE1Q9P212 2302 aa18.16■□□□□ 0.5
CACNB3-210ENST00000548874 RAI1Q7Z5J4 1906 aaPredicted RBP18.15■□□□□ 0.5
CACNB3-210ENST00000548874 METTL15A6NJ78 407 aa18.15■□□□□ 0.5
CACNB3-210ENST00000548874 SRSF10O75494 262 aaKnown RBP18.15■□□□□ 0.5
CACNB3-210ENST00000548874 THBS4P35443 961 aa18.15■□□□□ 0.5
CACNB3-210ENST00000548874 SLC6A9P48067 706 aa18.15■□□□□ 0.5
CACNB3-210ENST00000548874 ERVS71-1P61550 626 aa18.15■□□□□ 0.5
CACNB3-210ENST00000548874 RPS23P62266 143 aaKnown RBP18.15■□□□□ 0.5
CACNB3-210ENST00000548874 MSMPQ1L6U9 139 aa18.15■□□□□ 0.5
CACNB3-210ENST00000548874 KCTD20Q7Z5Y7 419 aa18.15■□□□□ 0.5
CACNB3-210ENST00000548874 EGFL6Q8IUX8 553 aa18.15■□□□□ 0.5
CACNB3-210ENST00000548874 OR1J1Q8NGS3 322 aa18.15■□□□□ 0.5
CACNB3-210ENST00000548874 SIGLEC11Q96RL6 698 aa18.15■□□□□ 0.5
CACNB3-210ENST00000548874 DHRS9Q9BPW9 319 aa18.15■□□□□ 0.5
CACNB3-210ENST00000548874 ALG8Q9BVK2 526 aa18.15■□□□□ 0.5
CACNB3-210ENST00000548874 STARD10Q9Y365 291 aa18.15■□□□□ 0.5
CACNB3-210ENST00000548874 EXOSC1Q9Y3B2 195 aaKnown RBP18.15■□□□□ 0.5
CACNB3-210ENST00000548874 ROS1P08922 2347 aa18.15■□□□□ 0.5
CACNB3-210ENST00000548874 LCATP04180 440 aa18.14■□□□□ 0.49
CACNB3-210ENST00000548874 CDK1P06493 297 aa18.14■□□□□ 0.49
CACNB3-210ENST00000548874 SLC2A1P11166 492 aa18.14■□□□□ 0.49
CACNB3-210ENST00000548874 TUBG1P23258 451 aa18.14■□□□□ 0.49
CACNB3-210ENST00000548874 ETV1P50549 477 aa18.14■□□□□ 0.49
CACNB3-210ENST00000548874 ZNF121P58317 390 aaPredicted RBP18.14■□□□□ 0.49
CACNB3-210ENST00000548874 PPP1CBP62140 327 aa18.14■□□□□ 0.49
CACNB3-210ENST00000548874 ACTA2P62736 377 aa18.14■□□□□ 0.49
CACNB3-210ENST00000548874 ACTG2P63267 376 aa18.14■□□□□ 0.49
CACNB3-210ENST00000548874 TP53I3Q53FA7 332 aa18.14■□□□□ 0.49
CACNB3-210ENST00000548874 LIPNQ5VXI9 398 aa18.14■□□□□ 0.49
CACNB3-210ENST00000548874 ZNF544Q6NX49 715 aa18.14■□□□□ 0.49
CACNB3-210ENST00000548874 SYS1Q8N2H4 156 aa18.14■□□□□ 0.49
CACNB3-210ENST00000548874 STX19Q8N4C7 294 aa18.14■□□□□ 0.49
CACNB3-210ENST00000548874 SGCDQ92629 289 aa18.14■□□□□ 0.49
CACNB3-210ENST00000548874 FBXW5Q969U6 566 aa18.14■□□□□ 0.49
CACNB3-210ENST00000548874 MRPL48Q96GC5 212 aaKnown RBP18.14■□□□□ 0.49
CACNB3-210ENST00000548874 MARS2Q96GW9 593 aaKnown RBP18.14■□□□□ 0.49
CACNB3-210ENST00000548874 COG8Q96MW5 612 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms