RNA–Protein interactions for RNA: ENST00000548570.1

APP-217, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 361 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-217ENST00000548570 PCMT1P22061 227 aa4.31□□□□□ -1.72
APP-217ENST00000548570 ARR3P36575 388 aa4.31□□□□□ -1.72
APP-217ENST00000548570 PSMB10P40306 273 aa4.31□□□□□ -1.72
APP-217ENST00000548570 KIR2DL3P43628 341 aa4.31□□□□□ -1.72
APP-217ENST00000548570 KIR3DL2P43630 455 aa4.31□□□□□ -1.72
APP-217ENST00000548570 MAP2K4P45985 399 aa4.31□□□□□ -1.72
APP-217ENST00000548570 CAPZA2P47755 286 aa4.31□□□□□ -1.72
APP-217ENST00000548570 SCRN3Q0VDG4 424 aa4.31□□□□□ -1.72
APP-217ENST00000548570 ST3GAL4Q11206 333 aa4.31□□□□□ -1.72
APP-217ENST00000548570 RAB40BQ12829 278 aa4.31□□□□□ -1.72
APP-217ENST00000548570 TNK1Q13470 666 aa4.31□□□□□ -1.72
APP-217ENST00000548570 EIF2B1Q14232 305 aaKnown RBP4.31□□□□□ -1.72
APP-217ENST00000548570 GALEQ14376 348 aa4.31□□□□□ -1.72
APP-217ENST00000548570 RAB35Q15286 201 aa4.31□□□□□ -1.72
APP-217ENST00000548570 SNAI3Q3KNW1 292 aa4.31□□□□□ -1.72
APP-217ENST00000548570 C3orf36Q3SXR2 165 aa4.31□□□□□ -1.72
APP-217ENST00000548570 TP53I3Q53FA7 332 aa4.31□□□□□ -1.72
APP-217ENST00000548570 OR2G6Q5TZ20 316 aa4.31□□□□□ -1.72
APP-217ENST00000548570 LCN1P1Q5VSP4 162 aa4.31□□□□□ -1.72
APP-217ENST00000548570 RNLSQ5VYX0 342 aa4.31□□□□□ -1.72
APP-217ENST00000548570 ZNF322Q6U7Q0 402 aaPredicted RBP4.31□□□□□ -1.72
APP-217ENST00000548570 MEX3BQ6ZN04 569 aaKnown RBP4.31□□□□□ -1.72
APP-217ENST00000548570 RFPL4BQ6ZWI9 263 aa4.31□□□□□ -1.72
APP-217ENST00000548570 DPPA2Q7Z7J5 298 aa4.31□□□□□ -1.72
APP-217ENST00000548570 LHFPL3Q86UP9 236 aa4.31□□□□□ -1.72
APP-217ENST00000548570 LRP11Q86VZ4 500 aa4.31□□□□□ -1.72
APP-217ENST00000548570 CCDC36Q8IYA8 594 aa4.31□□□□□ -1.72
APP-217ENST00000548570 ALDH16A1Q8IZ83 802 aa4.31□□□□□ -1.72
APP-217ENST00000548570 ZNF786Q8N393 782 aa4.31□□□□□ -1.72
APP-217ENST00000548570 PRSS35Q8N3Z0 413 aa4.31□□□□□ -1.72
APP-217ENST00000548570 SLC30A7Q8NEW0 376 aa4.31□□□□□ -1.72
APP-217ENST00000548570 GJC3Q8NFK1 279 aa4.31□□□□□ -1.72
APP-217ENST00000548570 IL17RDQ8NFM7 739 aa4.31□□□□□ -1.72
APP-217ENST00000548570 KBTBD8Q8NFY9 601 aa4.31□□□□□ -1.72
APP-217ENST00000548570 OR10H4Q8NGA5 316 aa4.31□□□□□ -1.72
APP-217ENST00000548570 OR10H5Q8NGA6 315 aa4.31□□□□□ -1.72
APP-217ENST00000548570 OR2T27Q8NH04 317 aa4.31□□□□□ -1.72
APP-217ENST00000548570 FAM222BQ8WU58 562 aa4.31□□□□□ -1.72
APP-217ENST00000548570 THEM6Q8WUY1 208 aa4.31□□□□□ -1.72
APP-217ENST00000548570 TMEM171Q8WVE6 324 aa4.31□□□□□ -1.72
APP-217ENST00000548570 IGFBPL1Q8WX77 278 aa4.31□□□□□ -1.72
APP-217ENST00000548570 RORBQ92753 470 aa4.31□□□□□ -1.72
APP-217ENST00000548570 RFKQ969G6 155 aa4.31□□□□□ -1.72
APP-217ENST00000548570 PELI1Q96FA3 418 aa4.31□□□□□ -1.72
APP-217ENST00000548570 PLPPR2Q96GM1 343 aa4.31□□□□□ -1.72
APP-217ENST00000548570 TMEM80Q96HE8 168 aa4.31□□□□□ -1.72
APP-217ENST00000548570 LYZL4Q96KX0 146 aa4.31□□□□□ -1.72
APP-217ENST00000548570 Q96MT0 163 aa4.31□□□□□ -1.72
APP-217ENST00000548570 DACH2Q96NX9 599 aa4.31□□□□□ -1.72
APP-217ENST00000548570 OR5M11Q96RB7 305 aa4.31□□□□□ -1.72
APP-217ENST00000548570 COQ7Q99807 217 aa4.31□□□□□ -1.72
APP-217ENST00000548570 ATF6BQ99941 703 aa4.31□□□□□ -1.72
APP-217ENST00000548570 MED18Q9BUE0 208 aa4.31□□□□□ -1.72
APP-217ENST00000548570 C1QTNF5Q9BXJ0 243 aa4.31□□□□□ -1.72
APP-217ENST00000548570 CDCA4Q9BXL8 241 aa4.31□□□□□ -1.72
APP-217ENST00000548570 C1orf198Q9H425 327 aa4.31□□□□□ -1.72
APP-217ENST00000548570 ELOVL3Q9HB03 270 aa4.31□□□□□ -1.72
APP-217ENST00000548570 G6PC2Q9NQR9 355 aa4.31□□□□□ -1.72
APP-217ENST00000548570 ACOXLQ9NUZ1 547 aa4.31□□□□□ -1.72
APP-217ENST00000548570 PLEK2Q9NYT0 353 aa4.31□□□□□ -1.72
APP-217ENST00000548570 CNOT2Q9NZN8 540 aaKnown RBP4.31□□□□□ -1.72
APP-217ENST00000548570 H2AFY2Q9P0M6 372 aaPredicted RBP4.31□□□□□ -1.72
APP-217ENST00000548570 PLEKHB1Q9UF11 243 aaPredicted RBP4.31□□□□□ -1.72
APP-217ENST00000548570 STARD10Q9Y365 291 aa4.31□□□□□ -1.72
APP-217ENST00000548570 LRP12Q9Y561 859 aa4.31□□□□□ -1.72
APP-217ENST00000548570 NCOA6Q14686 2063 aaPredicted RBP4.31□□□□□ -1.72
APP-217ENST00000548570 DCHS2Q6V1P9 2916 aa4.3□□□□□ -1.72
APP-217ENST00000548570 NBPF19A0A087WUL8 3843 aa4.3□□□□□ -1.72
APP-217ENST00000548570 A0A1B0GTI1 187 aa4.3□□□□□ -1.72
APP-217ENST00000548570 TMEM129A0AVI4 362 aa4.3□□□□□ -1.72
APP-217ENST00000548570 C5orf49A4QMS7 147 aa4.3□□□□□ -1.72
APP-217ENST00000548570 EFCAB10A6NFE3 127 aa4.3□□□□□ -1.72
APP-217ENST00000548570 A6NNC1 897 aa4.3□□□□□ -1.72
APP-217ENST00000548570 F5H5K5 113 aa4.3□□□□□ -1.72
APP-217ENST00000548570 F8W735 103 aaPredicted RBP4.3□□□□□ -1.72
APP-217ENST00000548570 SMAD7O15105 426 aaKnown RBP4.3□□□□□ -1.72
APP-217ENST00000548570 GPRIN2O60269 458 aa4.3□□□□□ -1.72
APP-217ENST00000548570 SMPD2O60906 423 aa4.3□□□□□ -1.72
APP-217ENST00000548570 RAB36O95755 333 aa4.3□□□□□ -1.72
APP-217ENST00000548570 LYNP07948 512 aa4.3□□□□□ -1.72
APP-217ENST00000548570 NR4A1P22736 598 aa4.3□□□□□ -1.72
APP-217ENST00000548570 STOMP27105 288 aa4.3□□□□□ -1.72
APP-217ENST00000548570 DCKP27707 260 aa4.3□□□□□ -1.72
APP-217ENST00000548570 RBMXP38159 391 aaKnown RBP4.3□□□□□ -1.72
APP-217ENST00000548570 MPV17P39210 176 aa4.3□□□□□ -1.72
APP-217ENST00000548570 CX3CR1P49238 355 aa4.3□□□□□ -1.72
APP-217ENST00000548570 PRKXP51817 358 aa4.3□□□□□ -1.72
APP-217ENST00000548570 GTF2A1P52655 376 aaPredicted RBP4.3□□□□□ -1.72
APP-217ENST00000548570 UBE2NP61088 152 aaKnown RBP4.3□□□□□ -1.72
APP-217ENST00000548570 PCBD1P61457 104 aa4.3□□□□□ -1.72
APP-217ENST00000548570 GALK2Q01415 458 aa4.3□□□□□ -1.72
APP-217ENST00000548570 EGR3Q06889 387 aa4.3□□□□□ -1.72
APP-217ENST00000548570 HNRNPA0Q13151 305 aaKnown RBP4.3□□□□□ -1.72
APP-217ENST00000548570 MED21Q13503 144 aa4.3□□□□□ -1.72
APP-217ENST00000548570 MST1LQ2TV78 715 aa4.3□□□□□ -1.72
APP-217ENST00000548570 ALKBH6Q3KRA9 238 aa4.3□□□□□ -1.72
APP-217ENST00000548570 KLHL22Q53GT1 634 aa4.3□□□□□ -1.72
APP-217ENST00000548570 TM4SF20Q53R12 229 aa4.3□□□□□ -1.72
APP-217ENST00000548570 C1QTNF12Q5T7M4 302 aa4.3□□□□□ -1.72
APP-217ENST00000548570 LIPNQ5VXI9 398 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms