RNA–Protein interactions for RNA: ENST00000548132.1

GCN1-204, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-204ENST00000548132 SHQ1Q6PI26 577 aaKnown RBP10.45□□□□□ -0.74
GCN1-204ENST00000548132 RRM2BQ7LG56 351 aa10.45□□□□□ -0.74
GCN1-204ENST00000548132 ZDHHC21Q8IVQ6 265 aa10.45□□□□□ -0.74
GCN1-204ENST00000548132 DEFB107AQ8IZN7 70 aa10.45□□□□□ -0.74
GCN1-204ENST00000548132 ZDHHC22Q8N966 263 aa10.45□□□□□ -0.74
GCN1-204ENST00000548132 ZNF420Q8TAQ5 688 aaPredicted RBP10.45□□□□□ -0.74
GCN1-204ENST00000548132 C1orf147Q96MC9 270 aaPredicted RBP10.45□□□□□ -0.74
GCN1-204ENST00000548132 CDRT15Q96T59 188 aa10.45□□□□□ -0.74
GCN1-204ENST00000548132 SLC30A2Q9BRI3 323 aa10.45□□□□□ -0.74
GCN1-204ENST00000548132 C1QTNF5Q9BXJ0 243 aa10.45□□□□□ -0.74
GCN1-204ENST00000548132 NSRP1Q9H0G5 558 aaKnown RBP10.45□□□□□ -0.74
GCN1-204ENST00000548132 WDR76Q9H967 626 aa10.45□□□□□ -0.74
GCN1-204ENST00000548132 PATZ1Q9HBE1 687 aaKnown RBP10.45□□□□□ -0.74
GCN1-204ENST00000548132 IL19Q9UHD0 177 aa10.45□□□□□ -0.74
GCN1-204ENST00000548132 PPIAL4EA0A075B759 164 aa10.44□□□□□ -0.74
GCN1-204ENST00000548132 PPIAL4CA0A0B4J2A2 164 aa10.44□□□□□ -0.74
GCN1-204ENST00000548132 IGHV3-64DA0A0J9YX35 117 aa10.44□□□□□ -0.74
GCN1-204ENST00000548132 PPIAL4DF5H284 164 aa10.44□□□□□ -0.74
GCN1-204ENST00000548132 F5H5P2 479 aa10.44□□□□□ -0.74
GCN1-204ENST00000548132 TMEM178BH3BS89 294 aa10.44□□□□□ -0.74
GCN1-204ENST00000548132 PPIAL4FP0DN26 164 aa10.44□□□□□ -0.74
GCN1-204ENST00000548132 ZNF12P17014 697 aa10.44□□□□□ -0.74
GCN1-204ENST00000548132 TUBG1P23258 451 aa10.44□□□□□ -0.74
GCN1-204ENST00000548132 CRABP1P29762 137 aa10.44□□□□□ -0.74
GCN1-204ENST00000548132 PYCR1P32322 319 aa10.44□□□□□ -0.74
GCN1-204ENST00000548132 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.44□□□□□ -0.74
GCN1-204ENST00000548132 SLC3A1Q07837 685 aa10.44□□□□□ -0.74
GCN1-204ENST00000548132 TRAP1Q12931 704 aaKnown RBP10.44□□□□□ -0.74
GCN1-204ENST00000548132 GK2Q14410 553 aaPredicted RBP10.44□□□□□ -0.74
GCN1-204ENST00000548132 CLEC12AQ5QGZ9 265 aa10.44□□□□□ -0.74
GCN1-204ENST00000548132 FAM201AQ5SY85 155 aa10.44□□□□□ -0.74
GCN1-204ENST00000548132 LIPNQ5VXI9 398 aa10.44□□□□□ -0.74
GCN1-204ENST00000548132 LCN8Q6JVE9 175 aa10.44□□□□□ -0.74
GCN1-204ENST00000548132 DNM1P34Q6PK57 102 aa10.44□□□□□ -0.74
GCN1-204ENST00000548132 ARL9Q6T311 187 aa10.44□□□□□ -0.74
GCN1-204ENST00000548132 CYP2R1Q6VVX0 501 aa10.44□□□□□ -0.74
GCN1-204ENST00000548132 USP43Q70EL4 1123 aa10.44□□□□□ -0.74
GCN1-204ENST00000548132 NAA40Q86UY6 237 aa10.44□□□□□ -0.74
GCN1-204ENST00000548132 JAZF1Q86VZ6 243 aa10.44□□□□□ -0.74
GCN1-204ENST00000548132 FITM2Q8N6M3 262 aa10.44□□□□□ -0.74
GCN1-204ENST00000548132 CYB561A3Q8NBI2 242 aa10.44□□□□□ -0.74
GCN1-204ENST00000548132 BHLHE23Q8NDY6 225 aa10.44□□□□□ -0.74
GCN1-204ENST00000548132 OR8G5Q8NG78 346 aa10.44□□□□□ -0.74
GCN1-204ENST00000548132 OR4Q3Q8NH05 313 aa10.44□□□□□ -0.74
GCN1-204ENST00000548132 ZFAND2BQ8WV99 257 aa10.44□□□□□ -0.74
GCN1-204ENST00000548132 APOBEC3DQ96AK3 386 aaPredicted RBP10.44□□□□□ -0.74
GCN1-204ENST00000548132 IFT27Q9BW83 186 aa10.44□□□□□ -0.74
GCN1-204ENST00000548132 OCEL1Q9H607 264 aa10.44□□□□□ -0.74
GCN1-204ENST00000548132 KRCC1Q9NPI7 259 aaPredicted RBP10.44□□□□□ -0.74
GCN1-204ENST00000548132 TUBG2Q9NRH3 451 aa10.44□□□□□ -0.74
GCN1-204ENST00000548132 DDX28Q9NUL7 540 aaKnown RBP10.44□□□□□ -0.74
GCN1-204ENST00000548132 ARL2BPQ9Y2Y0 163 aa10.44□□□□□ -0.74
GCN1-204ENST00000548132 COMMD3-BMI1R4GMX3 469 aa10.44□□□□□ -0.74
GCN1-204ENST00000548132 VWFP04275 2813 aa10.43□□□□□ -0.74
GCN1-204ENST00000548132 ZNF205O95201 554 aa10.43□□□□□ -0.74
GCN1-204ENST00000548132 CYB5R3P00387 301 aaPredicted RBP10.43□□□□□ -0.74
GCN1-204ENST00000548132 NOS3P29474 1203 aa10.43□□□□□ -0.74
GCN1-204ENST00000548132 SLC6A9P48067 706 aa10.43□□□□□ -0.74
GCN1-204ENST00000548132 COMPP49747 757 aaPredicted RBP10.43□□□□□ -0.74
GCN1-204ENST00000548132 HMGA2P52926 109 aa10.43□□□□□ -0.74
GCN1-204ENST00000548132 PPP1R8Q12972 351 aaKnown RBP10.43□□□□□ -0.74
GCN1-204ENST00000548132 KRT72Q14CN4 511 aa10.43□□□□□ -0.74
GCN1-204ENST00000548132 SNAI3Q3KNW1 292 aa10.43□□□□□ -0.74
GCN1-204ENST00000548132 SLC35F1Q5T1Q4 408 aa10.43□□□□□ -0.74
GCN1-204ENST00000548132 LRRC28Q86X40 367 aaPredicted RBP10.43□□□□□ -0.74
GCN1-204ENST00000548132 SPICQ8N5J4 248 aa10.43□□□□□ -0.74
GCN1-204ENST00000548132 GJC3Q8NFK1 279 aa10.43□□□□□ -0.74
GCN1-204ENST00000548132 PTP4A1Q93096 173 aa10.43□□□□□ -0.74
GCN1-204ENST00000548132 ZNF48Q96MX3 618 aaPredicted RBP10.43□□□□□ -0.74
GCN1-204ENST00000548132 ATF6BQ99941 703 aa10.43□□□□□ -0.74
GCN1-204ENST00000548132 NMNAT2Q9BZQ4 307 aa10.43□□□□□ -0.74
GCN1-204ENST00000548132 SRA1Q9HD15 236 aaKnown RBP10.43□□□□□ -0.74
GCN1-204ENST00000548132 PPP1R3CQ9UQK1 317 aa10.43□□□□□ -0.74
GCN1-204ENST00000548132 TVP23AA6NH52 213 aa10.42□□□□□ -0.74
GCN1-204ENST00000548132 FCN3O75636 299 aa10.42□□□□□ -0.74
GCN1-204ENST00000548132 RENP00797 406 aa10.42□□□□□ -0.74
GCN1-204ENST00000548132 HLA-DPB1P04440 258 aa10.42□□□□□ -0.74
GCN1-204ENST00000548132 TNFRSF1AP19438 455 aa10.42□□□□□ -0.74
GCN1-204ENST00000548132 GATA3P23771 443 aa10.42□□□□□ -0.74
GCN1-204ENST00000548132 CFPP27918 469 aa10.42□□□□□ -0.74
GCN1-204ENST00000548132 MDH2P40926 338 aaKnown RBP10.42□□□□□ -0.74
GCN1-204ENST00000548132 GATA4P43694 442 aa10.42□□□□□ -0.74
GCN1-204ENST00000548132 SMIM11AP58511 58 aa10.42□□□□□ -0.74
GCN1-204ENST00000548132 MAB21L1Q13394 359 aa10.42□□□□□ -0.74
GCN1-204ENST00000548132 CRMP1Q14194 572 aa10.42□□□□□ -0.74
GCN1-204ENST00000548132 PCK2Q16822 640 aa10.42□□□□□ -0.74
GCN1-204ENST00000548132 LINC01590Q5TEZ4 76 aa10.42□□□□□ -0.74
GCN1-204ENST00000548132 CPLX4Q7Z7G2 160 aa10.42□□□□□ -0.74
GCN1-204ENST00000548132 MOGAT3Q86VF5 341 aa10.42□□□□□ -0.74
GCN1-204ENST00000548132 SLC37A3Q8NCC5 494 aa10.42□□□□□ -0.74
GCN1-204ENST00000548132 OR52E2Q8NGJ4 325 aa10.42□□□□□ -0.74
GCN1-204ENST00000548132 OR9Q1Q8NGQ5 310 aa10.42□□□□□ -0.74
GCN1-204ENST00000548132 C22orf15Q8WYQ4 148 aa10.42□□□□□ -0.74
GCN1-204ENST00000548132 COG8Q96MW5 612 aa10.42□□□□□ -0.74
GCN1-204ENST00000548132 RBM4Q9BWF3 364 aaKnown RBP10.42□□□□□ -0.74
GCN1-204ENST00000548132 IL20Q9NYY1 176 aa10.42□□□□□ -0.74
GCN1-204ENST00000548132 ACTR3BQ9P1U1 418 aa10.42□□□□□ -0.74
GCN1-204ENST00000548132 INSIG2Q9Y5U4 225 aa10.42□□□□□ -0.74
GCN1-204ENST00000548132 M0R135 149 aa10.41□□□□□ -0.74
GCN1-204ENST00000548132 IDH3BO43837 385 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms