RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 CST4P01036 141 aa3.27□□□□□ -1.89
SCAF11-210ENST00000547654 CRATP43155 626 aa3.27□□□□□ -1.89
SCAF11-210ENST00000547654 VDAC2P45880 294 aaPredicted RBP3.27□□□□□ -1.89
SCAF11-210ENST00000547654 SLC26A2P50443 739 aa3.27□□□□□ -1.89
SCAF11-210ENST00000547654 RAB7AP51149 207 aa3.27□□□□□ -1.89
SCAF11-210ENST00000547654 SIGLEC14Q08ET2 396 aa3.27□□□□□ -1.89
SCAF11-210ENST00000547654 ELAVL2Q12926 359 aaKnown RBP3.27□□□□□ -1.89
SCAF11-210ENST00000547654 PMS2P3Q13401 168 aa3.27□□□□□ -1.89
SCAF11-210ENST00000547654 ASAH1Q13510 395 aa3.27□□□□□ -1.89
SCAF11-210ENST00000547654 RUNX3Q13761 415 aa3.27□□□□□ -1.89
SCAF11-210ENST00000547654 MAPRE2Q15555 327 aa3.27□□□□□ -1.89
SCAF11-210ENST00000547654 ATP6V1FQ16864 119 aa3.27□□□□□ -1.89
SCAF11-210ENST00000547654 OR2B11Q5JQS5 317 aa3.27□□□□□ -1.89
SCAF11-210ENST00000547654 PAGE2BQ5JRK9 111 aa3.27□□□□□ -1.89
SCAF11-210ENST00000547654 UTF1Q5T230 341 aa3.27□□□□□ -1.89
SCAF11-210ENST00000547654 TPTE2P1Q5T6R2 138 aa3.27□□□□□ -1.89
SCAF11-210ENST00000547654 C1orf146Q5VVC0 180 aa3.27□□□□□ -1.89
SCAF11-210ENST00000547654 ZNF470Q6ECI4 717 aa3.27□□□□□ -1.89
SCAF11-210ENST00000547654 CXCL17Q6UXB2 119 aa3.27□□□□□ -1.89
SCAF11-210ENST00000547654 TMIGD1Q6UXZ0 262 aa3.27□□□□□ -1.89
SCAF11-210ENST00000547654 GPRIN3Q6ZVF9 776 aa3.27□□□□□ -1.89
SCAF11-210ENST00000547654 C17orf82Q86X59 251 aaPredicted RBP3.27□□□□□ -1.89
SCAF11-210ENST00000547654 ABHD12Q8N2K0 398 aa3.27□□□□□ -1.89
SCAF11-210ENST00000547654 KIF2BQ8N4N8 673 aa3.27□□□□□ -1.89
SCAF11-210ENST00000547654 CSNK1G2-AS1Q8NCQ2 148 aa3.27□□□□□ -1.89
SCAF11-210ENST00000547654 DUSP18Q8NEJ0 188 aa3.27□□□□□ -1.89
SCAF11-210ENST00000547654 OR51S1Q8NGJ8 323 aa3.27□□□□□ -1.89
SCAF11-210ENST00000547654 OR2A1Q8NGT9 310 aa3.27□□□□□ -1.89
SCAF11-210ENST00000547654 OR10R2Q8NGX6 335 aa3.27□□□□□ -1.89
SCAF11-210ENST00000547654 OR9G1Q8NH87 305 aa3.27□□□□□ -1.89
SCAF11-210ENST00000547654 LGALS14Q8TCE9 139 aa3.27□□□□□ -1.89
SCAF11-210ENST00000547654 FGF14Q92915 247 aa3.27□□□□□ -1.89
SCAF11-210ENST00000547654 TMEM54Q969K7 222 aa3.27□□□□□ -1.89
SCAF11-210ENST00000547654 LRRC45Q96CN5 670 aa3.27□□□□□ -1.89
SCAF11-210ENST00000547654 DUS3LQ96G46 650 aaKnown RBP3.27□□□□□ -1.89
SCAF11-210ENST00000547654 CENPNQ96H22 339 aaPredicted RBP3.27□□□□□ -1.89
SCAF11-210ENST00000547654 SERPINB12Q96P63 405 aa3.27□□□□□ -1.89
SCAF11-210ENST00000547654 MICU1Q9BPX6 476 aa3.27□□□□□ -1.89
SCAF11-210ENST00000547654 UTP23Q9BRU9 249 aaKnown RBP3.27□□□□□ -1.89
SCAF11-210ENST00000547654 LRRC61Q9BV99 259 aa3.27□□□□□ -1.89
SCAF11-210ENST00000547654 CALN1Q9BXU9 219 aa3.27□□□□□ -1.89
SCAF11-210ENST00000547654 ULBP2Q9BZM5 246 aa3.27□□□□□ -1.89
SCAF11-210ENST00000547654 UBXN6Q9BZV1 441 aa3.27□□□□□ -1.89
SCAF11-210ENST00000547654 KCNJ16Q9NPI9 418 aa3.27□□□□□ -1.89
SCAF11-210ENST00000547654 SLC7A10Q9NS82 523 aa3.27□□□□□ -1.89
SCAF11-210ENST00000547654 QPCTLQ9NXS2 382 aa3.27□□□□□ -1.89
SCAF11-210ENST00000547654 SLIT3O75094 1523 aa3.27□□□□□ -1.89
SCAF11-210ENST00000547654 PPLO60437 1756 aa3.27□□□□□ -1.89
SCAF11-210ENST00000547654 ADAMTSL1Q8N6G6 1762 aa3.27□□□□□ -1.89
SCAF11-210ENST00000547654 SCN11AQ9UI33 1791 aa3.27□□□□□ -1.89
SCAF11-210ENST00000547654 SPATA31E1Q6ZUB1 1445 aa3.27□□□□□ -1.89
SCAF11-210ENST00000547654 C5P01031 1676 aa3.27□□□□□ -1.89
SCAF11-210ENST00000547654 PCNX3Q9H6A9 2034 aa3.26□□□□□ -1.89
SCAF11-210ENST00000547654 A0A0G2JRQ6 117 aa3.26□□□□□ -1.89
SCAF11-210ENST00000547654 C12orf77C9JDV5 145 aa3.26□□□□□ -1.89
SCAF11-210ENST00000547654 SMKR1H3BMG3 65 aa3.26□□□□□ -1.89
SCAF11-210ENST00000547654 K7N7A8 449 aa3.26□□□□□ -1.89
SCAF11-210ENST00000547654 ZNF253O75346 499 aa3.26□□□□□ -1.89
SCAF11-210ENST00000547654 KRTAP5-8O75690 187 aa3.26□□□□□ -1.89
SCAF11-210ENST00000547654 CRTAPO75718 401 aaPredicted RBP3.26□□□□□ -1.89
SCAF11-210ENST00000547654 GFAPP14136 432 aa3.26□□□□□ -1.89
SCAF11-210ENST00000547654 SYT1P21579 422 aa3.26□□□□□ -1.89
SCAF11-210ENST00000547654 IL32P24001 234 aa3.26□□□□□ -1.89
SCAF11-210ENST00000547654 AQP1P29972 269 aa3.26□□□□□ -1.89
SCAF11-210ENST00000547654 UGT2B10P36537 528 aa3.26□□□□□ -1.89
SCAF11-210ENST00000547654 RANBP1P43487 201 aa3.26□□□□□ -1.89
SCAF11-210ENST00000547654 CSNK1A1P48729 337 aa3.26□□□□□ -1.89
SCAF11-210ENST00000547654 VSNL1P62760 191 aa3.26□□□□□ -1.89
SCAF11-210ENST00000547654 CSNK1G2P78368 415 aa3.26□□□□□ -1.89
SCAF11-210ENST00000547654 SLC35B1P78383 322 aa3.26□□□□□ -1.89
SCAF11-210ENST00000547654 MS4A2Q01362 244 aa3.26□□□□□ -1.89
SCAF11-210ENST00000547654 SLC25A11Q02978 314 aaKnown RBP3.26□□□□□ -1.89
SCAF11-210ENST00000547654 ARFRP1Q13795 201 aa3.26□□□□□ -1.89
SCAF11-210ENST00000547654 TFDP2Q14188 446 aa3.26□□□□□ -1.89
SCAF11-210ENST00000547654 GGTLC2Q14390 218 aa3.26□□□□□ -1.89
SCAF11-210ENST00000547654 C5orf64Q2M2E5 130 aa3.26□□□□□ -1.89
SCAF11-210ENST00000547654 NDUFAF6Q330K2 333 aa3.26□□□□□ -1.89
SCAF11-210ENST00000547654 ZBED5Q49AG3 693 aa3.26□□□□□ -1.89
SCAF11-210ENST00000547654 UNQ9370/PRO34162Q6UXP9 181 aa3.26□□□□□ -1.89
SCAF11-210ENST00000547654 LINC00336Q6ZUF6 198 aa3.26□□□□□ -1.89
SCAF11-210ENST00000547654 CYP4Z1Q86W10 505 aa3.26□□□□□ -1.89
SCAF11-210ENST00000547654 CDC20BQ86Y33 519 aa3.26□□□□□ -1.89
SCAF11-210ENST00000547654 HIPK1Q86Z02 1210 aa3.26□□□□□ -1.89
SCAF11-210ENST00000547654 HSD17B11Q8NBQ5 300 aa3.26□□□□□ -1.89
SCAF11-210ENST00000547654 OR7G1Q8NGA0 311 aa3.26□□□□□ -1.89
SCAF11-210ENST00000547654 FANK1Q8TC84 345 aa3.26□□□□□ -1.89
SCAF11-210ENST00000547654 APH1BQ8WW43 257 aa3.26□□□□□ -1.89
SCAF11-210ENST00000547654 SLC25A38Q96DW6 304 aa3.26□□□□□ -1.89
SCAF11-210ENST00000547654 CPB2Q96IY4 423 aa3.26□□□□□ -1.89
SCAF11-210ENST00000547654 CNPY3Q9BT09 278 aa3.26□□□□□ -1.89
SCAF11-210ENST00000547654 C20orf85Q9H1P6 137 aa3.26□□□□□ -1.89
SCAF11-210ENST00000547654 SYT4Q9H2B2 425 aa3.26□□□□□ -1.89
SCAF11-210ENST00000547654 NXF3Q9H4D5 531 aaKnown RBP3.26□□□□□ -1.89
SCAF11-210ENST00000547654 UBE2ZQ9H832 354 aaPredicted RBP3.26□□□□□ -1.89
SCAF11-210ENST00000547654 OR2S2Q9NQN1 319 aa3.26□□□□□ -1.89
SCAF11-210ENST00000547654 MS4A12Q9NXJ0 267 aa3.26□□□□□ -1.89
SCAF11-210ENST00000547654 ASF1AQ9Y294 204 aa3.26□□□□□ -1.89
SCAF11-210ENST00000547654 POFUT2Q9Y2G5 429 aa3.26□□□□□ -1.89
SCAF11-210ENST00000547654 UGT2A1Q9Y4X1 527 aa3.26□□□□□ -1.89
SCAF11-210ENST00000547654 PRSS21Q9Y6M0 314 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms