RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 ACSM4P0C7M7 580 aa13.51□□□□□ -0.25
DDX54-204ENST00000546898 PAICSP22234 425 aaKnown RBP13.51□□□□□ -0.25
DDX54-204ENST00000546898 ERFP50548 548 aa13.51□□□□□ -0.25
DDX54-204ENST00000546898 TPTEP56180 551 aa13.51□□□□□ -0.25
DDX54-204ENST00000546898 CDK5R2Q13319 367 aa13.51□□□□□ -0.25
DDX54-204ENST00000546898 PCK2Q16822 640 aa13.51□□□□□ -0.25
DDX54-204ENST00000546898 HFEQ30201 348 aa13.51□□□□□ -0.25
DDX54-204ENST00000546898 TEX30Q5JUR7 227 aa13.51□□□□□ -0.25
DDX54-204ENST00000546898 HS3ST5Q8IZT8 346 aa13.51□□□□□ -0.25
DDX54-204ENST00000546898 IQCF1Q8N6M8 205 aa13.51□□□□□ -0.25
DDX54-204ENST00000546898 ATG16L2Q8NAA4 619 aa13.51□□□□□ -0.25
DDX54-204ENST00000546898 ZNRF4Q8WWF5 429 aa13.51□□□□□ -0.25
DDX54-204ENST00000546898 SPTSSAQ969W0 71 aa13.51□□□□□ -0.25
DDX54-204ENST00000546898 C1orf159Q96HA4 380 aa13.51□□□□□ -0.25
DDX54-204ENST00000546898 MAP6Q96JE9 813 aa13.51□□□□□ -0.25
DDX54-204ENST00000546898 NTN4Q9HB63 628 aa13.51□□□□□ -0.25
DDX54-204ENST00000546898 MSL2Q9HCI7 577 aa13.51□□□□□ -0.25
DDX54-204ENST00000546898 PTTG3PQ9NZH4 202 aa13.51□□□□□ -0.25
DDX54-204ENST00000546898 KIF17Q9P2E2 1029 aa13.51□□□□□ -0.25
DDX54-204ENST00000546898 LPAR3Q9UBY5 353 aa13.51□□□□□ -0.25
DDX54-204ENST00000546898 CDC42EP3Q9UKI2 254 aa13.51□□□□□ -0.25
DDX54-204ENST00000546898 KCNS2Q9ULS6 477 aa13.51□□□□□ -0.25
DDX54-204ENST00000546898 ANK3Q12955 4377 aaKnown RBP13.51□□□□□ -0.25
DDX54-204ENST00000546898 CLDN25C9JDP6 229 aa13.5□□□□□ -0.25
DDX54-204ENST00000546898 F5H5K5 113 aa13.5□□□□□ -0.25
DDX54-204ENST00000546898 LMX1BO60663 402 aa13.5□□□□□ -0.25
DDX54-204ENST00000546898 CDC14BO60729 498 aa13.5□□□□□ -0.25
DDX54-204ENST00000546898 HMGN1P05114 100 aa13.5□□□□□ -0.25
DDX54-204ENST00000546898 TNFSF4P23510 183 aa13.5□□□□□ -0.25
DDX54-204ENST00000546898 POU1F1P28069 291 aa13.5□□□□□ -0.25
DDX54-204ENST00000546898 SLC3A1Q07837 685 aa13.5□□□□□ -0.25
DDX54-204ENST00000546898 GINS1Q14691 196 aa13.5□□□□□ -0.25
DDX54-204ENST00000546898 RSPO1Q2MKA7 263 aaPredicted RBP13.5□□□□□ -0.25
DDX54-204ENST00000546898 LINC01590Q5TEZ4 76 aa13.5□□□□□ -0.25
DDX54-204ENST00000546898 C1orf146Q5VVC0 180 aa13.5□□□□□ -0.25
DDX54-204ENST00000546898 LYPD4Q6UWN0 246 aa13.5□□□□□ -0.25
DDX54-204ENST00000546898 DCXRQ7Z4W1 244 aa13.5□□□□□ -0.25
DDX54-204ENST00000546898 OR10S1Q8NGN2 331 aa13.5□□□□□ -0.25
DDX54-204ENST00000546898 OR6K6Q8NGW6 343 aa13.5□□□□□ -0.25
DDX54-204ENST00000546898 UTP4Q969X6 686 aaKnown RBP13.5□□□□□ -0.25
DDX54-204ENST00000546898 DUS3LQ96G46 650 aaKnown RBP13.5□□□□□ -0.25
DDX54-204ENST00000546898 TEX12Q9BXU0 123 aa13.5□□□□□ -0.25
DDX54-204ENST00000546898 WDR76Q9H967 626 aa13.5□□□□□ -0.25
DDX54-204ENST00000546898 SLC25A19Q9HC21 320 aa13.5□□□□□ -0.25
DDX54-204ENST00000546898 M0R135 149 aa13.49□□□□□ -0.25
DDX54-204ENST00000546898 SURF4O15260 269 aa13.49□□□□□ -0.25
DDX54-204ENST00000546898 GLCEO94923 617 aa13.49□□□□□ -0.25
DDX54-204ENST00000546898 SPARCP09486 303 aa13.49□□□□□ -0.25
DDX54-204ENST00000546898 CLUP10909 449 aa13.49□□□□□ -0.25
DDX54-204ENST00000546898 SELEP16581 610 aa13.49□□□□□ -0.25
DDX54-204ENST00000546898 TNFRSF1AP19438 455 aa13.49□□□□□ -0.25
DDX54-204ENST00000546898 PRKACGP22612 351 aa13.49□□□□□ -0.25
DDX54-204ENST00000546898 IL2RGP31785 369 aa13.49□□□□□ -0.25
DDX54-204ENST00000546898 OTX1P32242 354 aaPredicted RBP13.49□□□□□ -0.25
DDX54-204ENST00000546898 RPS27P42677 84 aaKnown RBP13.49□□□□□ -0.25
DDX54-204ENST00000546898 CDH15P55291 814 aa13.49□□□□□ -0.25
DDX54-204ENST00000546898 TNFAIP6P98066 277 aaPredicted RBP13.49□□□□□ -0.25
DDX54-204ENST00000546898 CDK5Q00535 292 aa13.49□□□□□ -0.25
DDX54-204ENST00000546898 MALLQ13021 153 aa13.49□□□□□ -0.25
DDX54-204ENST00000546898 ATP6AP1Q15904 470 aa13.49□□□□□ -0.25
DDX54-204ENST00000546898 CHRFAM7AQ494W8 412 aa13.49□□□□□ -0.25
DDX54-204ENST00000546898 ACSM5Q6NUN0 579 aa13.49□□□□□ -0.25
DDX54-204ENST00000546898 FAHD1Q6P587 224 aa13.49□□□□□ -0.25
DDX54-204ENST00000546898 PARP8Q8N3A8 854 aa13.49□□□□□ -0.25
DDX54-204ENST00000546898 LINC01356Q8N9X3 169 aa13.49□□□□□ -0.25
DDX54-204ENST00000546898 ZNF511Q8NB15 262 aa13.49□□□□□ -0.25
DDX54-204ENST00000546898 OR5K1Q8NHB7 308 aa13.49□□□□□ -0.25
DDX54-204ENST00000546898 CLDND2Q8NHS1 167 aa13.49□□□□□ -0.25
DDX54-204ENST00000546898 ZNF799Q96GE5 643 aa13.49□□□□□ -0.25
DDX54-204ENST00000546898 TIMD4Q96H15 378 aa13.49□□□□□ -0.25
DDX54-204ENST00000546898 SOX7Q9BT81 388 aa13.49□□□□□ -0.25
DDX54-204ENST00000546898 MARCH7Q9H992 704 aa13.49□□□□□ -0.25
DDX54-204ENST00000546898 IL19Q9UHD0 177 aa13.49□□□□□ -0.25
DDX54-204ENST00000546898 FAM183AA6NL82 134 aa13.48□□□□□ -0.25
DDX54-204ENST00000546898 IQCF6A8MYZ5 107 aa13.48□□□□□ -0.25
DDX54-204ENST00000546898 ZNF878C9JN71 531 aa13.48□□□□□ -0.25
DDX54-204ENST00000546898 PRR23D1E9PI22 279 aaPredicted RBP13.48□□□□□ -0.25
DDX54-204ENST00000546898 PRODHO43272 600 aa13.48□□□□□ -0.25
DDX54-204ENST00000546898 CIB2O75838 187 aa13.48□□□□□ -0.25
DDX54-204ENST00000546898 TGFAP01135 160 aa13.48□□□□□ -0.25
DDX54-204ENST00000546898 LCATP04180 440 aa13.48□□□□□ -0.25
DDX54-204ENST00000546898 PRR23D2P0DMB1 279 aaPredicted RBP13.48□□□□□ -0.25
DDX54-204ENST00000546898 PSKH1P11801 424 aa13.48□□□□□ -0.25
DDX54-204ENST00000546898 FCGR1AP12314 374 aa13.48□□□□□ -0.25
DDX54-204ENST00000546898 IGFBP5P24593 272 aa13.48□□□□□ -0.25
DDX54-204ENST00000546898 FASP25445 335 aa13.48□□□□□ -0.25
DDX54-204ENST00000546898 CCNIQ14094 377 aa13.48□□□□□ -0.25
DDX54-204ENST00000546898 HLXQ14774 488 aaPredicted RBP13.48□□□□□ -0.25
DDX54-204ENST00000546898 DRAM2Q6UX65 266 aa13.48□□□□□ -0.25
DDX54-204ENST00000546898 Q6ZR03 302 aa13.48□□□□□ -0.25
DDX54-204ENST00000546898 OR8G5Q8NG78 346 aa13.48□□□□□ -0.25
DDX54-204ENST00000546898 OR2Z1Q8NG97 314 aa13.48□□□□□ -0.25
DDX54-204ENST00000546898 RAB1CQ92928 201 aa13.48□□□□□ -0.25
DDX54-204ENST00000546898 SLAMF6Q96DU3 332 aa13.48□□□□□ -0.25
DDX54-204ENST00000546898 INTS14Q96SY0 518 aa13.48□□□□□ -0.25
DDX54-204ENST00000546898 COPS4Q9BT78 406 aa13.48□□□□□ -0.25
DDX54-204ENST00000546898 HCAR1Q9BXC0 346 aa13.48□□□□□ -0.25
DDX54-204ENST00000546898 MED20Q9H944 212 aa13.48□□□□□ -0.25
DDX54-204ENST00000546898 PAPOLBQ9NRJ5 636 aaKnown RBP13.48□□□□□ -0.25
DDX54-204ENST00000546898 AP4S1Q9Y587 144 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms