RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 OR10S1Q8NGN2 331 aa10.11□□□□□ -0.79
YBX3-217ENST00000546164 GTF3AQ92664 365 aaKnown RBP10.11□□□□□ -0.79
YBX3-217ENST00000546164 YIPF5Q969M3 257 aa10.11□□□□□ -0.79
YBX3-217ENST00000546164 POM121Q96HA1 1249 aa10.11□□□□□ -0.79
YBX3-217ENST00000546164 HCAR1Q9BXC0 346 aa10.11□□□□□ -0.79
YBX3-217ENST00000546164 GABARAPL1Q9H0R8 117 aa10.11□□□□□ -0.79
YBX3-217ENST00000546164 POFUT1Q9H488 388 aa10.11□□□□□ -0.79
YBX3-217ENST00000546164 WDR76Q9H967 626 aa10.11□□□□□ -0.79
YBX3-217ENST00000546164 MARCH7Q9H992 704 aa10.11□□□□□ -0.79
YBX3-217ENST00000546164 PAPOLBQ9NRJ5 636 aaKnown RBP10.11□□□□□ -0.79
YBX3-217ENST00000546164 PURGQ9UJV8 347 aaKnown RBP10.11□□□□□ -0.79
YBX3-217ENST00000546164 ZDHHC8Q9ULC8 765 aa10.11□□□□□ -0.79
YBX3-217ENST00000546164 ABCA2Q9BZC7 2435 aa10.1□□□□□ -0.79
YBX3-217ENST00000546164 FAM183AA6NL82 134 aa10.1□□□□□ -0.79
YBX3-217ENST00000546164 LYNX1G3V0Z9 82 aa10.1□□□□□ -0.79
YBX3-217ENST00000546164 PRODHO43272 600 aa10.1□□□□□ -0.79
YBX3-217ENST00000546164 TIMM8AO60220 97 aaPredicted RBP10.1□□□□□ -0.79
YBX3-217ENST00000546164 LILRA1O75019 489 aa10.1□□□□□ -0.79
YBX3-217ENST00000546164 GLCEO94923 617 aa10.1□□□□□ -0.79
YBX3-217ENST00000546164 IGHV1-46P01743 117 aa10.1□□□□□ -0.79
YBX3-217ENST00000546164 IGHV4-31P0DP07 118 aa10.1□□□□□ -0.79
YBX3-217ENST00000546164 LYNX1P0DP58 116 aa10.1□□□□□ -0.79
YBX3-217ENST00000546164 PSKH1P11801 424 aa10.1□□□□□ -0.79
YBX3-217ENST00000546164 PAICSP22234 425 aaKnown RBP10.1□□□□□ -0.79
YBX3-217ENST00000546164 COL8A2P25067 703 aa10.1□□□□□ -0.79
YBX3-217ENST00000546164 POU1F1P28069 291 aa10.1□□□□□ -0.79
YBX3-217ENST00000546164 CRYBB2P43320 205 aa10.1□□□□□ -0.79
YBX3-217ENST00000546164 GZMKP49863 264 aa10.1□□□□□ -0.79
YBX3-217ENST00000546164 DAPP51397 102 aa10.1□□□□□ -0.79
YBX3-217ENST00000546164 CHN2P52757 468 aa10.1□□□□□ -0.79
YBX3-217ENST00000546164 CCL8P80075 99 aa10.1□□□□□ -0.79
YBX3-217ENST00000546164 CDK5R2Q13319 367 aa10.1□□□□□ -0.79
YBX3-217ENST00000546164 KRTAP21-3Q3LHN1 58 aa10.1□□□□□ -0.79
YBX3-217ENST00000546164 C6orf52Q5T4I8 152 aa10.1□□□□□ -0.79
YBX3-217ENST00000546164 ZNF511Q8NB15 262 aa10.1□□□□□ -0.79
YBX3-217ENST00000546164 ST7LQ8TDW4 575 aa10.1□□□□□ -0.79
YBX3-217ENST00000546164 HPS1Q92902 700 aa10.1□□□□□ -0.79
YBX3-217ENST00000546164 CMBLQ96DG6 245 aa10.1□□□□□ -0.79
YBX3-217ENST00000546164 TEX12Q9BXU0 123 aa10.1□□□□□ -0.79
YBX3-217ENST00000546164 KIF17Q9P2E2 1029 aa10.1□□□□□ -0.79
YBX3-217ENST00000546164 INAFM1C9JVW0 142 aa10.09□□□□□ -0.79
YBX3-217ENST00000546164 PRR23D1E9PI22 279 aaPredicted RBP10.09□□□□□ -0.79
YBX3-217ENST00000546164 F5H5K5 113 aa10.09□□□□□ -0.79
YBX3-217ENST00000546164 G3V2T6 193 aa10.09□□□□□ -0.79
YBX3-217ENST00000546164 M0R135 149 aa10.09□□□□□ -0.79
YBX3-217ENST00000546164 ZNF593O00488 134 aaPredicted RBP10.09□□□□□ -0.79
YBX3-217ENST00000546164 EBAG9O00559 213 aa10.09□□□□□ -0.79
YBX3-217ENST00000546164 SPARCP09486 303 aa10.09□□□□□ -0.79
YBX3-217ENST00000546164 PRR23D2P0DMB1 279 aaPredicted RBP10.09□□□□□ -0.79
YBX3-217ENST00000546164 RPS27P42677 84 aaKnown RBP10.09□□□□□ -0.79
YBX3-217ENST00000546164 GPR6P46095 362 aaPredicted RBP10.09□□□□□ -0.79
YBX3-217ENST00000546164 CRISP1P54107 249 aa10.09□□□□□ -0.79
YBX3-217ENST00000546164 TPTEP56180 551 aa10.09□□□□□ -0.79
YBX3-217ENST00000546164 ACTR3P61158 418 aa10.09□□□□□ -0.79
YBX3-217ENST00000546164 ESRRGP62508 458 aa10.09□□□□□ -0.79
YBX3-217ENST00000546164 PPP2R2BQ00005 443 aa10.09□□□□□ -0.79
YBX3-217ENST00000546164 KDM4DQ6B0I6 523 aa10.09□□□□□ -0.79
YBX3-217ENST00000546164 CYB5R2Q6BCY4 276 aa10.09□□□□□ -0.79
YBX3-217ENST00000546164 RHOUQ7L0Q8 258 aa10.09□□□□□ -0.79
YBX3-217ENST00000546164 DCXRQ7Z4W1 244 aa10.09□□□□□ -0.79
YBX3-217ENST00000546164 ZDHHC13Q8IUH4 622 aa10.09□□□□□ -0.79
YBX3-217ENST00000546164 TIGD4Q8IY51 512 aa10.09□□□□□ -0.79
YBX3-217ENST00000546164 OR6K6Q8NGW6 343 aa10.09□□□□□ -0.79
YBX3-217ENST00000546164 SPTSSAQ969W0 71 aa10.09□□□□□ -0.79
YBX3-217ENST00000546164 ELMOD3Q96FG2 381 aa10.09□□□□□ -0.79
YBX3-217ENST00000546164 ZNF799Q96GE5 643 aa10.09□□□□□ -0.79
YBX3-217ENST00000546164 C1orf159Q96HA4 380 aa10.09□□□□□ -0.79
YBX3-217ENST00000546164 MED20Q9H944 212 aa10.09□□□□□ -0.79
YBX3-217ENST00000546164 SAP30LQ9HAJ7 183 aa10.09□□□□□ -0.79
YBX3-217ENST00000546164 ZNF275Q9NSD4 429 aaPredicted RBP10.09□□□□□ -0.79
YBX3-217ENST00000546164 DECR2Q9NUI1 292 aa10.09□□□□□ -0.79
YBX3-217ENST00000546164 IGHV1-69-2A0A0G2JMI3 117 aa10.08□□□□□ -0.8
YBX3-217ENST00000546164 A0A1B0GWJ7 208 aa10.08□□□□□ -0.8
YBX3-217ENST00000546164 A8MV72 311 aaPredicted RBP10.08□□□□□ -0.8
YBX3-217ENST00000546164 SPRY3O43610 288 aa10.08□□□□□ -0.8
YBX3-217ENST00000546164 GSTT1P30711 240 aa10.08□□□□□ -0.8
YBX3-217ENST00000546164 TRIP10Q15642 601 aa10.08□□□□□ -0.8
YBX3-217ENST00000546164 TSTQ16762 297 aaKnown RBP10.08□□□□□ -0.8
YBX3-217ENST00000546164 SLC35D3Q5M8T2 416 aa10.08□□□□□ -0.8
YBX3-217ENST00000546164 PLBD1Q6P4A8 553 aa10.08□□□□□ -0.8
YBX3-217ENST00000546164 DRAM2Q6UX65 266 aa10.08□□□□□ -0.8
YBX3-217ENST00000546164 Q6ZR03 302 aa10.08□□□□□ -0.8
YBX3-217ENST00000546164 USP51Q70EK9 711 aa10.08□□□□□ -0.8
YBX3-217ENST00000546164 LRTOMTQ8WZ04 291 aa10.08□□□□□ -0.8
YBX3-217ENST00000546164 SLAMF6Q96DU3 332 aa10.08□□□□□ -0.8
YBX3-217ENST00000546164 CENPNQ96H22 339 aaPredicted RBP10.08□□□□□ -0.8
YBX3-217ENST00000546164 INTS14Q96SY0 518 aa10.08□□□□□ -0.8
YBX3-217ENST00000546164 KCNJ15Q99712 375 aa10.08□□□□□ -0.8
YBX3-217ENST00000546164 OSBPL10Q9BXB5 764 aa10.08□□□□□ -0.8
YBX3-217ENST00000546164 EGLN1Q9GZT9 426 aa10.08□□□□□ -0.8
YBX3-217ENST00000546164 OR51V1Q9H2C8 321 aa10.08□□□□□ -0.8
YBX3-217ENST00000546164 MSL2Q9HCI7 577 aa10.08□□□□□ -0.8
YBX3-217ENST00000546164 TMEM160Q9NX00 188 aa10.08□□□□□ -0.8
YBX3-217ENST00000546164 PTTG3PQ9NZH4 202 aa10.08□□□□□ -0.8
YBX3-217ENST00000546164 ENOPH1Q9UHY7 261 aa10.08□□□□□ -0.8
YBX3-217ENST00000546164 YLPM1P49750 1951 aaKnown RBP10.08□□□□□ -0.8
YBX3-217ENST00000546164 LRP5LA4QPB2 252 aa10.07□□□□□ -0.8
YBX3-217ENST00000546164 IQCF6A8MYZ5 107 aa10.07□□□□□ -0.8
YBX3-217ENST00000546164 ZNF878C9JN71 531 aa10.07□□□□□ -0.8
YBX3-217ENST00000546164 CDC14BO60729 498 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms