RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 F2RL1P55085 397 aa12.71□□□□□ -0.37
SRP54-202ENST00000546080 EIF2S3LQ2VIR3 472 aaKnown RBP12.71□□□□□ -0.37
SRP54-202ENST00000546080 FAM76BQ5HYJ3 339 aa12.71□□□□□ -0.37
SRP54-202ENST00000546080 SLC29A4Q7RTT9 530 aa12.71□□□□□ -0.37
SRP54-202ENST00000546080 NUP54Q7Z3B4 507 aa12.71□□□□□ -0.37
SRP54-202ENST00000546080 MARCH3Q86UD3 253 aa12.71□□□□□ -0.37
SRP54-202ENST00000546080 NAA40Q86UY6 237 aa12.71□□□□□ -0.37
SRP54-202ENST00000546080 FRMD1Q8N878 549 aa12.71□□□□□ -0.37
SRP54-202ENST00000546080 DTWD2Q8NBA8 298 aa12.71□□□□□ -0.37
SRP54-202ENST00000546080 ZNF524Q96C55 264 aa12.71□□□□□ -0.37
SRP54-202ENST00000546080 CNTD2Q9H8S5 307 aa12.71□□□□□ -0.37
SRP54-202ENST00000546080 NIT2Q9NQR4 276 aa12.71□□□□□ -0.37
SRP54-202ENST00000546080 OR5AC2Q9NZP5 309 aa12.71□□□□□ -0.37
SRP54-202ENST00000546080 PCDHGA1Q9Y5H4 931 aa12.71□□□□□ -0.37
SRP54-202ENST00000546080 IGLV1-36A0A0B4J1U3 117 aa12.7□□□□□ -0.38
SRP54-202ENST00000546080 K7EQS6 105 aa12.7□□□□□ -0.38
SRP54-202ENST00000546080 LMX1BO60663 402 aa12.7□□□□□ -0.38
SRP54-202ENST00000546080 BGLAPP02818 100 aa12.7□□□□□ -0.38
SRP54-202ENST00000546080 CXCR1P25024 350 aa12.7□□□□□ -0.38
SRP54-202ENST00000546080 SEC13P55735 322 aa12.7□□□□□ -0.38
SRP54-202ENST00000546080 RPL27P61353 136 aaKnown RBP12.7□□□□□ -0.38
SRP54-202ENST00000546080 BTG2P78543 158 aa12.7□□□□□ -0.38
SRP54-202ENST00000546080 INSM1Q01101 510 aaPredicted RBP12.7□□□□□ -0.38
SRP54-202ENST00000546080 ACKR1Q16570 336 aa12.7□□□□□ -0.38
SRP54-202ENST00000546080 TMEM128Q5BJH2 165 aa12.7□□□□□ -0.38
SRP54-202ENST00000546080 EIF5AL1Q6IS14 154 aaKnown RBP12.7□□□□□ -0.38
SRP54-202ENST00000546080 HOGA1Q86XE5 327 aa12.7□□□□□ -0.38
SRP54-202ENST00000546080 NUBPLQ8TB37 319 aa12.7□□□□□ -0.38
SRP54-202ENST00000546080 PATE1Q8WXA2 126 aa12.7□□□□□ -0.38
SRP54-202ENST00000546080 ELSPBP1Q96BH3 223 aa12.7□□□□□ -0.38
SRP54-202ENST00000546080 SLC25A36Q96CQ1 311 aa12.7□□□□□ -0.38
SRP54-202ENST00000546080 AQP10Q96PS8 301 aa12.7□□□□□ -0.38
SRP54-202ENST00000546080 KLHDC3Q9BQ90 382 aa12.7□□□□□ -0.38
SRP54-202ENST00000546080 SULT4A1Q9BR01 284 aa12.7□□□□□ -0.38
SRP54-202ENST00000546080 CFHR5Q9BXR6 569 aa12.7□□□□□ -0.38
SRP54-202ENST00000546080 OR52A1Q9UKL2 312 aa12.7□□□□□ -0.38
SRP54-202ENST00000546080 RHBDD3Q9Y3P4 386 aa12.7□□□□□ -0.38
SRP54-202ENST00000546080 FANCMQ8IYD8 2048 aa12.7□□□□□ -0.38
SRP54-202ENST00000546080 LYL1P12980 280 aa12.7□□□□□ -0.38
SRP54-202ENST00000546080 CTLA4P16410 223 aa12.7□□□□□ -0.38
SRP54-202ENST00000546080 LPAR6P43657 344 aa12.7□□□□□ -0.38
SRP54-202ENST00000546080 PPT1P50897 306 aa12.7□□□□□ -0.38
SRP54-202ENST00000546080 EIF5AP63241 154 aaKnown RBP12.7□□□□□ -0.38
SRP54-202ENST00000546080 FUT7Q11130 342 aa12.7□□□□□ -0.38
SRP54-202ENST00000546080 UNC119Q13432 240 aa12.7□□□□□ -0.38
SRP54-202ENST00000546080 SLC9A3R2Q15599 337 aa12.7□□□□□ -0.38
SRP54-202ENST00000546080 CHRDL2Q6WN34 429 aa12.7□□□□□ -0.38
SRP54-202ENST00000546080 OOSP2Q86WS3 158 aa12.7□□□□□ -0.38
SRP54-202ENST00000546080 ZNF615Q8N8J6 731 aa12.7□□□□□ -0.38
SRP54-202ENST00000546080 OR4K15Q8NH41 348 aa12.7□□□□□ -0.38
SRP54-202ENST00000546080 ZNF519Q8TB69 540 aa12.7□□□□□ -0.38
SRP54-202ENST00000546080 CLCC1Q96S66 551 aa12.7□□□□□ -0.38
SRP54-202ENST00000546080 EGLN1Q9GZT9 426 aa12.7□□□□□ -0.38
SRP54-202ENST00000546080 RAB18Q9NP72 206 aa12.7□□□□□ -0.38
SRP54-202ENST00000546080 PRODH2Q9UF12 536 aa12.7□□□□□ -0.38
SRP54-202ENST00000546080 TRAV36DV7A0A075B6V5 113 aa12.69□□□□□ -0.38
SRP54-202ENST00000546080 MFNGO00587 321 aa12.69□□□□□ -0.38
SRP54-202ENST00000546080 CLDN4O14493 209 aa12.69□□□□□ -0.38
SRP54-202ENST00000546080 AGPAT2O15120 278 aa12.69□□□□□ -0.38
SRP54-202ENST00000546080 LRP3O75074 770 aa12.69□□□□□ -0.38
SRP54-202ENST00000546080 ADAP1O75689 374 aa12.69□□□□□ -0.38
SRP54-202ENST00000546080 SCGNO76038 276 aa12.69□□□□□ -0.38
SRP54-202ENST00000546080 UTS2O95399 124 aa12.69□□□□□ -0.38
SRP54-202ENST00000546080 ISG15P05161 165 aa12.69□□□□□ -0.38
SRP54-202ENST00000546080 HOXC4P09017 264 aaPredicted RBP12.69□□□□□ -0.38
SRP54-202ENST00000546080 NME2P22392 152 aa12.69□□□□□ -0.38
SRP54-202ENST00000546080 CPT2P23786 658 aa12.69□□□□□ -0.38
SRP54-202ENST00000546080 CD80P33681 288 aa12.69□□□□□ -0.38
SRP54-202ENST00000546080 PPP1CAP62136 330 aa12.69□□□□□ -0.38
SRP54-202ENST00000546080 IGLV3-21P80748 117 aaPredicted RBP12.69□□□□□ -0.38
SRP54-202ENST00000546080 ZP2Q05996 745 aa12.69□□□□□ -0.38
SRP54-202ENST00000546080 ZNF704Q6ZNC4 412 aaPredicted RBP12.69□□□□□ -0.38
SRP54-202ENST00000546080 MAMDC2Q7Z304 686 aaPredicted RBP12.69□□□□□ -0.38
SRP54-202ENST00000546080 LYPD6Q86Y78 171 aa12.69□□□□□ -0.38
SRP54-202ENST00000546080 FAM160A2Q8N612 972 aaPredicted RBP12.69□□□□□ -0.38
SRP54-202ENST00000546080 BHLHE23Q8NDY6 225 aa12.69□□□□□ -0.38
SRP54-202ENST00000546080 HIST1H2BAQ96A08 127 aa12.69□□□□□ -0.38
SRP54-202ENST00000546080 ZC3H10Q96K80 434 aaKnown RBP12.69□□□□□ -0.38
SRP54-202ENST00000546080 TCEAL7Q9BRU2 100 aa12.69□□□□□ -0.38
SRP54-202ENST00000546080 LAT2Q9GZY6 243 aa12.69□□□□□ -0.38
SRP54-202ENST00000546080 RNF208Q9H0X6 261 aa12.69□□□□□ -0.38
SRP54-202ENST00000546080 FAM60AQ9NP50 221 aa12.69□□□□□ -0.38
SRP54-202ENST00000546080 PDE7BQ9NP56 450 aa12.69□□□□□ -0.38
SRP54-202ENST00000546080 FLVCR1Q9Y5Y0 555 aa12.69□□□□□ -0.38
SRP54-202ENST00000546080 SRSF10O75494 262 aaKnown RBP12.69□□□□□ -0.38
SRP54-202ENST00000546080 CSTBP04080 98 aaKnown RBP12.69□□□□□ -0.38
SRP54-202ENST00000546080 CD5P06127 495 aa12.69□□□□□ -0.38
SRP54-202ENST00000546080 PET100P0DJ07 73 aa12.69□□□□□ -0.38
SRP54-202ENST00000546080 TMEM244Q5VVB8 128 aa12.69□□□□□ -0.38
SRP54-202ENST00000546080 C1QL3Q5VWW1 255 aa12.69□□□□□ -0.38
SRP54-202ENST00000546080 SLC5A7Q9GZV3 580 aa12.69□□□□□ -0.38
SRP54-202ENST00000546080 ADAM19Q9H013 955 aa12.69□□□□□ -0.38
SRP54-202ENST00000546080 TAF9BQ9HBM6 251 aa12.69□□□□□ -0.38
SRP54-202ENST00000546080 G6PC2Q9NQR9 355 aa12.69□□□□□ -0.38
SRP54-202ENST00000546080 VSX1Q9NZR4 365 aaPredicted RBP12.69□□□□□ -0.38
SRP54-202ENST00000546080 P2RY10O00398 339 aa12.68□□□□□ -0.38
SRP54-202ENST00000546080 SSX5O60225 188 aa12.68□□□□□ -0.38
SRP54-202ENST00000546080 EIF1BO60739 113 aaKnown RBP12.68□□□□□ -0.38
SRP54-202ENST00000546080 FBXO24O75426 580 aa12.68□□□□□ -0.38
SRP54-202ENST00000546080 SFT2D2O95562 160 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms