RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 ETFAP13804 333 aa12.57□□□□□ -0.4
CLSTN3-216ENST00000545663 ETS2P15036 469 aa12.57□□□□□ -0.4
CLSTN3-216ENST00000545663 KITLGP21583 273 aa12.57□□□□□ -0.4
CLSTN3-216ENST00000545663 ERVK-25P63136 954 aa12.57□□□□□ -0.4
CLSTN3-216ENST00000545663 CBX1P83916 185 aa12.57□□□□□ -0.4
CLSTN3-216ENST00000545663 REEP3Q6NUK4 255 aa12.57□□□□□ -0.4
CLSTN3-216ENST00000545663 C5orf46Q6UWT4 87 aa12.57□□□□□ -0.4
CLSTN3-216ENST00000545663 BBS10Q8TAM1 723 aa12.57□□□□□ -0.4
CLSTN3-216ENST00000545663 MMADHCQ9H3L0 296 aaPredicted RBP12.57□□□□□ -0.4
CLSTN3-216ENST00000545663 EVA1AQ9H8M9 152 aa12.57□□□□□ -0.4
CLSTN3-216ENST00000545663 SERTAD4Q9NUC0 356 aa12.57□□□□□ -0.4
CLSTN3-216ENST00000545663 ZNF232Q9UNY5 417 aa12.57□□□□□ -0.4
CLSTN3-216ENST00000545663 ANGPT4Q9Y264 503 aa12.57□□□□□ -0.4
CLSTN3-216ENST00000545663 IFT52Q9Y366 437 aa12.57□□□□□ -0.4
CLSTN3-216ENST00000545663 FRAS1Q86XX4 4008 aa12.57□□□□□ -0.4
CLSTN3-216ENST00000545663 PRORSD1PA6NEY8 169 aa12.56□□□□□ -0.4
CLSTN3-216ENST00000545663 EBAG9O00559 213 aa12.56□□□□□ -0.4
CLSTN3-216ENST00000545663 OR10H3O60404 316 aa12.56□□□□□ -0.4
CLSTN3-216ENST00000545663 ICMTO60725 284 aa12.56□□□□□ -0.4
CLSTN3-216ENST00000545663 GMNNO75496 209 aa12.56□□□□□ -0.4
CLSTN3-216ENST00000545663 IFNA14P01570 189 aa12.56□□□□□ -0.4
CLSTN3-216ENST00000545663 ARHGDIAP52565 204 aa12.56□□□□□ -0.4
CLSTN3-216ENST00000545663 MTPNP58546 118 aa12.56□□□□□ -0.4
CLSTN3-216ENST00000545663 PSME3P61289 254 aa12.56□□□□□ -0.4
CLSTN3-216ENST00000545663 CDK6Q00534 326 aa12.56□□□□□ -0.4
CLSTN3-216ENST00000545663 C8orf82Q6P1X6 216 aaPredicted RBP12.56□□□□□ -0.4
CLSTN3-216ENST00000545663 OR10A6Q8NH74 314 aa12.56□□□□□ -0.4
CLSTN3-216ENST00000545663 SLC38A5Q8WUX1 472 aa12.56□□□□□ -0.4
CLSTN3-216ENST00000545663 RASSF5Q8WWW0 418 aa12.56□□□□□ -0.4
CLSTN3-216ENST00000545663 RBMXL1Q96E39 390 aaKnown RBP12.56□□□□□ -0.4
CLSTN3-216ENST00000545663 SIAEQ9HAT2 523 aa12.56□□□□□ -0.4
CLSTN3-216ENST00000545663 C12orf10Q9HB07 376 aa12.56□□□□□ -0.4
CLSTN3-216ENST00000545663 TAS2R5Q9NYW4 299 aa12.56□□□□□ -0.4
CLSTN3-216ENST00000545663 FAM220BPB1ANY3 271 aa12.55□□□□□ -0.4
CLSTN3-216ENST00000545663 B2RBV5 119 aa12.55□□□□□ -0.4
CLSTN3-216ENST00000545663 F5H5P2 479 aa12.55□□□□□ -0.4
CLSTN3-216ENST00000545663 NPFFO15130 113 aa12.55□□□□□ -0.4
CLSTN3-216ENST00000545663 FSTL3O95633 263 aa12.55□□□□□ -0.4
CLSTN3-216ENST00000545663 BCHEP06276 602 aa12.55□□□□□ -0.4
CLSTN3-216ENST00000545663 PAX6P26367 422 aa12.55□□□□□ -0.4
CLSTN3-216ENST00000545663 NPY4RP50391 375 aa12.55□□□□□ -0.4
CLSTN3-216ENST00000545663 ZNF84P51523 738 aa12.55□□□□□ -0.4
CLSTN3-216ENST00000545663 SLC35A2P78381 396 aa12.55□□□□□ -0.4
CLSTN3-216ENST00000545663 KLRD1Q13241 179 aa12.55□□□□□ -0.4
CLSTN3-216ENST00000545663 SCARB2Q14108 478 aa12.55□□□□□ -0.4
CLSTN3-216ENST00000545663 SGCAQ16586 387 aa12.55□□□□□ -0.4
CLSTN3-216ENST00000545663 HIST3H3Q16695 136 aa12.55□□□□□ -0.4
CLSTN3-216ENST00000545663 DNAL1Q4LDG9 190 aa12.55□□□□□ -0.4
CLSTN3-216ENST00000545663 ALG10BQ5I7T1 473 aa12.55□□□□□ -0.4
CLSTN3-216ENST00000545663 SAMD4BQ5PRF9 694 aaKnown RBP12.55□□□□□ -0.4
CLSTN3-216ENST00000545663 ADAMTSL5Q6ZMM2 481 aa12.55□□□□□ -0.4
CLSTN3-216ENST00000545663 PATL1Q86TB9 770 aaKnown RBP12.55□□□□□ -0.4
CLSTN3-216ENST00000545663 COMTD1Q86VU5 262 aa12.55□□□□□ -0.4
CLSTN3-216ENST00000545663 SLC15A3Q8IY34 581 aa12.55□□□□□ -0.4
CLSTN3-216ENST00000545663 OR2T12Q8NG77 320 aa12.55□□□□□ -0.4
CLSTN3-216ENST00000545663 OR6S1Q8NH40 331 aa12.55□□□□□ -0.4
CLSTN3-216ENST00000545663 WIPF2Q8TF74 440 aaPredicted RBP12.55□□□□□ -0.4
CLSTN3-216ENST00000545663 C17orf50Q8WW18 174 aa12.55□□□□□ -0.4
CLSTN3-216ENST00000545663 RORBQ92753 470 aa12.55□□□□□ -0.4
CLSTN3-216ENST00000545663 NABP1Q96AH0 204 aa12.55□□□□□ -0.4
CLSTN3-216ENST00000545663 HAVCR1Q96D42 359 aa12.55□□□□□ -0.4
CLSTN3-216ENST00000545663 RCC1LQ96I51 464 aaKnown RBP12.55□□□□□ -0.4
CLSTN3-216ENST00000545663 OR2H1Q9GZK4 316 aa12.55□□□□□ -0.4
CLSTN3-216ENST00000545663 ELOVL3Q9HB03 270 aa12.55□□□□□ -0.4
CLSTN3-216ENST00000545663 SIRT7Q9NRC8 400 aa12.55□□□□□ -0.4
CLSTN3-216ENST00000545663 ERVK-18Q9QC07 812 aa12.55□□□□□ -0.4
CLSTN3-216ENST00000545663 ABCD2Q9UBJ2 740 aa12.55□□□□□ -0.4
CLSTN3-216ENST00000545663 NKX1-2Q9UD57 310 aaPredicted RBP12.55□□□□□ -0.4
CLSTN3-216ENST00000545663 PRPF19Q9UMS4 504 aaKnown RBP12.55□□□□□ -0.4
CLSTN3-216ENST00000545663 STARD10Q9Y365 291 aa12.55□□□□□ -0.4
CLSTN3-216ENST00000545663 CAB39Q9Y376 341 aaPredicted RBP12.55□□□□□ -0.4
CLSTN3-216ENST00000545663 UGT2A1Q9Y4X1 527 aa12.55□□□□□ -0.4
CLSTN3-216ENST00000545663 MAB21L2Q9Y586 359 aa12.55□□□□□ -0.4
CLSTN3-216ENST00000545663 LRRC30A6NM36 301 aa12.54□□□□□ -0.4
CLSTN3-216ENST00000545663 CHST1O43916 411 aa12.54□□□□□ -0.4
CLSTN3-216ENST00000545663 SLC2A10O95528 541 aa12.54□□□□□ -0.4
CLSTN3-216ENST00000545663 PAHP00439 452 aa12.54□□□□□ -0.4
CLSTN3-216ENST00000545663 CHRM2P08172 466 aa12.54□□□□□ -0.4
CLSTN3-216ENST00000545663 ZNF26P17031 533 aaPredicted RBP12.54□□□□□ -0.4
CLSTN3-216ENST00000545663 GSTM3P21266 225 aa12.54□□□□□ -0.4
CLSTN3-216ENST00000545663 LMO1P25800 156 aa12.54□□□□□ -0.4
CLSTN3-216ENST00000545663 SLC7A2P52569 658 aa12.54□□□□□ -0.4
CLSTN3-216ENST00000545663 CLRN1P58418 232 aa12.54□□□□□ -0.4
CLSTN3-216ENST00000545663 VMACQ2NL98 169 aa12.54□□□□□ -0.4
CLSTN3-216ENST00000545663 RABL3Q5HYI8 236 aa12.54□□□□□ -0.4
CLSTN3-216ENST00000545663 SFRP4Q6FHJ7 346 aaPredicted RBP12.54□□□□□ -0.4
CLSTN3-216ENST00000545663 ZFAND6Q6FIF0 208 aa12.54□□□□□ -0.4
CLSTN3-216ENST00000545663 CRIP3Q6Q6R5 217 aa12.54□□□□□ -0.4
CLSTN3-216ENST00000545663 ARL9Q6T311 187 aa12.54□□□□□ -0.4
CLSTN3-216ENST00000545663 BTN2A1Q7KYR7 527 aa12.54□□□□□ -0.4
CLSTN3-216ENST00000545663 FGFRL1Q8N441 504 aa12.54□□□□□ -0.4
CLSTN3-216ENST00000545663 OR5J2Q8NH18 312 aa12.54□□□□□ -0.4
CLSTN3-216ENST00000545663 SLC35B4Q969S0 331 aa12.54□□□□□ -0.4
CLSTN3-216ENST00000545663 TMEM19Q96HH6 336 aa12.54□□□□□ -0.4
CLSTN3-216ENST00000545663 OR5M11Q96RB7 305 aa12.54□□□□□ -0.4
CLSTN3-216ENST00000545663 NKX3-1Q99801 234 aaPredicted RBP12.54□□□□□ -0.4
CLSTN3-216ENST00000545663 KCNN2Q9H2S1 579 aa12.54□□□□□ -0.4
CLSTN3-216ENST00000545663 IKZF5Q9H5V7 419 aa12.54□□□□□ -0.4
CLSTN3-216ENST00000545663 INPP5EQ9NRR6 644 aa12.54□□□□□ -0.4
CLSTN3-216ENST00000545663 ADA2Q9NZK5 511 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms