RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, human

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHFR-223	ENST00000544268	DAZL	Q92904	295 aa	Known RBP	13.43	□□□□□ -0.26
CHFR-223	ENST00000544268	SLC46A1	Q96NT5	459 aa		13.43	□□□□□ -0.26
CHFR-223	ENST00000544268	KLHL9	Q9P2J3	617 aa		13.43	□□□□□ -0.26
CHFR-223	ENST00000544268	MIOX	Q9UGB7	285 aa		13.43	□□□□□ -0.26
CHFR-223	ENST00000544268	OR5V1	Q9UGF6	321 aa		13.43	□□□□□ -0.26
CHFR-223	ENST00000544268	KCNG2	Q9UJ96	466 aa		13.43	□□□□□ -0.26
CHFR-223	ENST00000544268	MEX3A	A1L020	520 aa	Known RBP	13.42	□□□□□ -0.26
CHFR-223	ENST00000544268	TTLL8	A6PVC2	850 aa		13.42	□□□□□ -0.26
CHFR-223	ENST00000544268	WRB	O00258	174 aa		13.42	□□□□□ -0.26
CHFR-223	ENST00000544268	KRT33A	O76009	404 aa		13.42	□□□□□ -0.26
CHFR-223	ENST00000544268	ONECUT2	O95948	504 aa		13.42	□□□□□ -0.26
CHFR-223	ENST00000544268	IGHV2-70	P01814	119 aa		13.42	□□□□□ -0.26
CHFR-223	ENST00000544268	SDHA	P31040	664 aa		13.42	□□□□□ -0.26
CHFR-223	ENST00000544268	SNRPE	P62304	92 aa	Known RBP	13.42	□□□□□ -0.26
CHFR-223	ENST00000544268	MDGA2	Q7Z553	956 aa		13.42	□□□□□ -0.26
CHFR-223	ENST00000544268	ZFP82	Q8N141	532 aa		13.42	□□□□□ -0.26
CHFR-223	ENST00000544268	ADIPOR1	Q96A54	375 aa		13.42	□□□□□ -0.26
CHFR-223	ENST00000544268	PAPOLG	Q9BWT3	736 aa	Known RBP	13.42	□□□□□ -0.26
CHFR-223	ENST00000544268	TMEM9B	Q9NQ34	198 aa		13.42	□□□□□ -0.26
CHFR-223	ENST00000544268	GRHPR	Q9UBQ7	328 aa		13.42	□□□□□ -0.26
CHFR-223	ENST00000544268	IL33	O95760	270 aa		13.42	□□□□□ -0.26
CHFR-223	ENST00000544268	ABHD16A	O95870	558 aa		13.42	□□□□□ -0.26
CHFR-223	ENST00000544268	HEXA	P06865	529 aa		13.42	□□□□□ -0.26
CHFR-223	ENST00000544268	PSMD4	P55036	377 aa	Known RBP	13.42	□□□□□ -0.26
CHFR-223	ENST00000544268	RNF4	P78317	190 aa		13.42	□□□□□ -0.26
CHFR-223	ENST00000544268	OC90	Q02509	493 aa	Predicted RBP	13.42	□□□□□ -0.26
CHFR-223	ENST00000544268	ECH1	Q13011	328 aa		13.42	□□□□□ -0.26
CHFR-223	ENST00000544268	MPPED2	Q15777	294 aa		13.42	□□□□□ -0.26
CHFR-223	ENST00000544268	MEP1B	Q16820	701 aa		13.42	□□□□□ -0.26
CHFR-223	ENST00000544268	C2orf68	Q2NKX9	166 aa		13.42	□□□□□ -0.26
CHFR-223	ENST00000544268	C10orf91	Q5T1B1	145 aa		13.42	□□□□□ -0.26
CHFR-223	ENST00000544268	STAC2	Q6ZMT1	411 aa		13.42	□□□□□ -0.26
CHFR-223	ENST00000544268	SYNPR	Q8TBG9	265 aa		13.42	□□□□□ -0.26
CHFR-223	ENST00000544268	RXFP4	Q8TDU9	374 aa		13.42	□□□□□ -0.26
CHFR-223	ENST00000544268	EDARADD	Q8WWZ3	215 aa		13.42	□□□□□ -0.26
CHFR-223	ENST00000544268	GPX7	Q96SL4	187 aa	Predicted RBP	13.42	□□□□□ -0.26
CHFR-223	ENST00000544268	OR11A1	Q9GZK7	315 aa		13.42	□□□□□ -0.26
CHFR-223	ENST00000544268	ANKRD20A5P	A0PJZ0	165 aa		13.41	□□□□□ -0.26
CHFR-223	ENST00000544268	VSTM2B	A6NLU5	285 aa		13.41	□□□□□ -0.26
CHFR-223	ENST00000544268	IL11	P20809	199 aa		13.41	□□□□□ -0.26
CHFR-223	ENST00000544268	CCKBR	P32239	447 aa		13.41	□□□□□ -0.26
CHFR-223	ENST00000544268	DCTD	P32321	178 aa		13.41	□□□□□ -0.26
CHFR-223	ENST00000544268	PPIC	P45877	212 aa		13.41	□□□□□ -0.26
CHFR-223	ENST00000544268	PTH2R	P49190	550 aa		13.41	□□□□□ -0.26
CHFR-223	ENST00000544268	RAC1	P63000	192 aa		13.41	□□□□□ -0.26
CHFR-223	ENST00000544268	FAM69B	Q5VUD6	431 aa		13.41	□□□□□ -0.26
CHFR-223	ENST00000544268	RBMS3	Q6XE24	437 aa	Known RBP	13.41	□□□□□ -0.26
CHFR-223	ENST00000544268	GLB1L2	Q8IW92	636 aa		13.41	□□□□□ -0.26
CHFR-223	ENST00000544268	WDFY1	Q8IWB7	410 aa		13.41	□□□□□ -0.26
CHFR-223	ENST00000544268	DMRTC2	Q8IXT2	367 aa	Predicted RBP	13.41	□□□□□ -0.26
CHFR-223	ENST00000544268	PRSS35	Q8N3Z0	413 aa		13.41	□□□□□ -0.26
CHFR-223	ENST00000544268	OR2AK2	Q8NG84	335 aa		13.41	□□□□□ -0.26
CHFR-223	ENST00000544268	OR52B4	Q8NGK2	314 aa		13.41	□□□□□ -0.26
CHFR-223	ENST00000544268	FCAMR	Q8WWV6	532 aa		13.41	□□□□□ -0.26
CHFR-223	ENST00000544268	ASB13	Q8WXK3	278 aa		13.41	□□□□□ -0.26
CHFR-223	ENST00000544268	SPSB2	Q99619	263 aa		13.41	□□□□□ -0.26
CHFR-223	ENST00000544268	SEBOX	Q9HB31	216 aa	Predicted RBP	13.41	□□□□□ -0.26
CHFR-223	ENST00000544268		A0A0D9SG52	128 aa		13.41	□□□□□ -0.26
CHFR-223	ENST00000544268	CDC40	O60508	579 aa	Known RBP eCLIP	13.41	□□□□□ -0.26
CHFR-223	ENST00000544268	ACHE	P22303	614 aa		13.41	□□□□□ -0.26
CHFR-223	ENST00000544268	VAMP1	P23763	118 aa		13.41	□□□□□ -0.26
CHFR-223	ENST00000544268	CDK2	P24941	298 aa		13.41	□□□□□ -0.26
CHFR-223	ENST00000544268	RAB5B	P61020	215 aa		13.41	□□□□□ -0.26
CHFR-223	ENST00000544268	FAM76B	Q5HYJ3	339 aa		13.41	□□□□□ -0.26
CHFR-223	ENST00000544268	SLC35D3	Q5M8T2	416 aa		13.41	□□□□□ -0.26
CHFR-223	ENST00000544268	SLC36A1	Q7Z2H8	476 aa		13.41	□□□□□ -0.26
CHFR-223	ENST00000544268	ANKRD37	Q7Z713	158 aa		13.41	□□□□□ -0.26
CHFR-223	ENST00000544268	BIVM	Q86UB2	503 aa		13.41	□□□□□ -0.26
CHFR-223	ENST00000544268	OR1N1	Q8NGS0	311 aa		13.41	□□□□□ -0.26
CHFR-223	ENST00000544268	TCEAL7	Q9BRU2	100 aa		13.41	□□□□□ -0.26
CHFR-223	ENST00000544268	CARHSP1	Q9Y2V2	147 aa	Known RBP	13.41	□□□□□ -0.26
CHFR-223	ENST00000544268		V9GY05	133 aa		13.41	□□□□□ -0.26
CHFR-223	ENST00000544268	FREM3	P0C091	2139 aa		13.4	□□□□□ -0.26
CHFR-223	ENST00000544268	RFPL4A	A6NLU0	287 aa		13.4	□□□□□ -0.26
CHFR-223	ENST00000544268	RFPL4AL1	F8VTS6	287 aa		13.4	□□□□□ -0.26
CHFR-223	ENST00000544268	ALOX12B	O75342	701 aa		13.4	□□□□□ -0.26
CHFR-223	ENST00000544268	GUSB	P08236	651 aa		13.4	□□□□□ -0.26
CHFR-223	ENST00000544268	VSIG10L2	P0DP72	767 aa		13.4	□□□□□ -0.26
CHFR-223	ENST00000544268	ADCYAP1	P18509	176 aa		13.4	□□□□□ -0.26
CHFR-223	ENST00000544268	EFNB2	P52799	333 aa		13.4	□□□□□ -0.26
CHFR-223	ENST00000544268	ALKBH1	Q13686	389 aa	Known RBP	13.4	□□□□□ -0.26
CHFR-223	ENST00000544268	EBP	Q15125	230 aa	Known RBP	13.4	□□□□□ -0.26
CHFR-223	ENST00000544268	SLC16A9	Q7RTY1	509 aa		13.4	□□□□□ -0.26
CHFR-223	ENST00000544268	TMPRSS12	Q86WS5	348 aa		13.4	□□□□□ -0.26
CHFR-223	ENST00000544268	CDC20B	Q86Y33	519 aa		13.4	□□□□□ -0.26
CHFR-223	ENST00000544268	OR5AK2	Q8NH90	309 aa		13.4	□□□□□ -0.26
CHFR-223	ENST00000544268	RPS4Y2	Q8TD47	263 aa		13.4	□□□□□ -0.26
CHFR-223	ENST00000544268	THAP3	Q8WTV1	239 aa	Predicted RBP	13.4	□□□□□ -0.26
CHFR-223	ENST00000544268	SLC25A28	Q96A46	364 aa		13.4	□□□□□ -0.26
CHFR-223	ENST00000544268	CMKLR1	Q99788	373 aa		13.4	□□□□□ -0.26
CHFR-223	ENST00000544268	ADAT1	Q9BUB4	502 aa	Known RBP	13.4	□□□□□ -0.26
CHFR-223	ENST00000544268	MFRP	Q9BY79	579 aa		13.4	□□□□□ -0.26
CHFR-223	ENST00000544268	COPS7A	Q9UBW8	275 aa		13.4	□□□□□ -0.26
CHFR-223	ENST00000544268	SLC22A13	Q9Y226	551 aa		13.4	□□□□□ -0.26
CHFR-223	ENST00000544268	CBY1	Q9Y3M2	126 aa		13.4	□□□□□ -0.26
CHFR-223	ENST00000544268	LOC390937	A0A1W2PQ73	354 aa		13.4	□□□□□ -0.26
CHFR-223	ENST00000544268	MEIS3P1	A6NDR6	274 aa		13.4	□□□□□ -0.26
CHFR-223	ENST00000544268	C5orf52	A6NGY3	159 aa		13.4	□□□□□ -0.26
CHFR-223	ENST00000544268	UBE2C	O00762	179 aa		13.4	□□□□□ -0.26
CHFR-223	ENST00000544268	MPZL1	O95297	269 aa		13.4	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms