RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 ZNF727A8MUV8 499 aa11.38□□□□□ -0.59
SMG8-202ENST00000543872 GMFGO60234 142 aa11.38□□□□□ -0.59
SMG8-202ENST00000543872 ARRB1P49407 418 aaPredicted RBP11.38□□□□□ -0.59
SMG8-202ENST00000543872 ZNF84P51523 738 aa11.38□□□□□ -0.59
SMG8-202ENST00000543872 CCR4P51679 360 aa11.38□□□□□ -0.59
SMG8-202ENST00000543872 SCAND1P57086 179 aa11.38□□□□□ -0.59
SMG8-202ENST00000543872 LSM6P62312 80 aaKnown RBP11.38□□□□□ -0.59
SMG8-202ENST00000543872 PNLIPRP3Q17RR3 467 aa11.38□□□□□ -0.59
SMG8-202ENST00000543872 FCRL6Q6DN72 434 aa11.38□□□□□ -0.59
SMG8-202ENST00000543872 ULK3Q6PHR2 472 aa11.38□□□□□ -0.59
SMG8-202ENST00000543872 HIST2H3AQ71DI3 136 aa11.38□□□□□ -0.59
SMG8-202ENST00000543872 PRSS58Q8IYP2 241 aa11.38□□□□□ -0.59
SMG8-202ENST00000543872 DUSP15Q9H1R2 295 aaPredicted RBP11.38□□□□□ -0.59
SMG8-202ENST00000543872 MMACHCQ9Y4U1 282 aa11.38□□□□□ -0.59
SMG8-202ENST00000543872 EML5Q05BV3 1969 aa11.38□□□□□ -0.59
SMG8-202ENST00000543872 HEATR5AQ86XA9 2040 aa11.38□□□□□ -0.59
SMG8-202ENST00000543872 FAM221BA6H8Z2 402 aa11.38□□□□□ -0.59
SMG8-202ENST00000543872 ZNF354AO60765 605 aaPredicted RBP11.38□□□□□ -0.59
SMG8-202ENST00000543872 TXNDC12O95881 172 aa11.38□□□□□ -0.59
SMG8-202ENST00000543872 AK1P00568 194 aa11.38□□□□□ -0.59
SMG8-202ENST00000543872 FHITP49789 147 aa11.38□□□□□ -0.59
SMG8-202ENST00000543872 COTL1Q14019 142 aa11.38□□□□□ -0.59
SMG8-202ENST00000543872 ITPRIPL2Q3MIP1 535 aa11.38□□□□□ -0.59
SMG8-202ENST00000543872 TMEM225Q6GV28 225 aa11.38□□□□□ -0.59
SMG8-202ENST00000543872 LCN10Q6JVE6 187 aa11.38□□□□□ -0.59
SMG8-202ENST00000543872 PRSS54Q6PEW0 395 aa11.38□□□□□ -0.59
SMG8-202ENST00000543872 RTN4RL2Q86UN3 420 aa11.38□□□□□ -0.59
SMG8-202ENST00000543872 OR10C1Q96KK4 312 aa11.38□□□□□ -0.59
SMG8-202ENST00000543872 CHST5Q9GZS9 411 aa11.38□□□□□ -0.59
SMG8-202ENST00000543872 SLCO5A1Q9H2Y9 848 aa11.38□□□□□ -0.59
SMG8-202ENST00000543872 PDE7BQ9NP56 450 aa11.38□□□□□ -0.59
SMG8-202ENST00000543872 ZDHHC8Q9ULC8 765 aa11.38□□□□□ -0.59
SMG8-202ENST00000543872 TSTD3H0UI37 97 aa11.37□□□□□ -0.59
SMG8-202ENST00000543872 RPS4Y1P22090 263 aaKnown RBP11.37□□□□□ -0.59
SMG8-202ENST00000543872 TLX1P31314 330 aaPredicted RBP11.37□□□□□ -0.59
SMG8-202ENST00000543872 GRK6P43250 576 aa11.37□□□□□ -0.59
SMG8-202ENST00000543872 DNASE1L1P49184 302 aa11.37□□□□□ -0.59
SMG8-202ENST00000543872 CX3CR1P49238 355 aa11.37□□□□□ -0.59
SMG8-202ENST00000543872 EIF5AP63241 154 aaKnown RBP11.37□□□□□ -0.59
SMG8-202ENST00000543872 RASGEF1BQ0VAM2 473 aa11.37□□□□□ -0.59
SMG8-202ENST00000543872 RUNX2Q13950 521 aa11.37□□□□□ -0.59
SMG8-202ENST00000543872 FAM53BQ14153 422 aa11.37□□□□□ -0.59
SMG8-202ENST00000543872 DHCR24Q15392 516 aa11.37□□□□□ -0.59
SMG8-202ENST00000543872 ZNF239Q16600 458 aaKnown RBP11.37□□□□□ -0.59
SMG8-202ENST00000543872 TCTN1Q2MV58 587 aa11.37□□□□□ -0.59
SMG8-202ENST00000543872 AWAT2Q6E213 333 aa11.37□□□□□ -0.59
SMG8-202ENST00000543872 ZNF679Q8IYX0 411 aa11.37□□□□□ -0.59
SMG8-202ENST00000543872 CDRT4Q8N9R6 151 aa11.37□□□□□ -0.59
SMG8-202ENST00000543872 OR2L3Q8NG85 312 aa11.37□□□□□ -0.59
SMG8-202ENST00000543872 KCNJ16Q9NPI9 418 aa11.37□□□□□ -0.59
SMG8-202ENST00000543872 FAM212BQ9NTI7 297 aaPredicted RBP11.37□□□□□ -0.59
SMG8-202ENST00000543872 C19orf53Q9UNZ5 99 aaPredicted RBP11.37□□□□□ -0.59
SMG8-202ENST00000543872 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.37□□□□□ -0.59
SMG8-202ENST00000543872 PNPP00491 289 aa11.37□□□□□ -0.59
SMG8-202ENST00000543872 LRG1P02750 347 aa11.37□□□□□ -0.59
SMG8-202ENST00000543872 PRH1P02810 166 aa11.37□□□□□ -0.59
SMG8-202ENST00000543872 GNB3P16520 340 aa11.37□□□□□ -0.59
SMG8-202ENST00000543872 CTGFP29279 349 aa11.37□□□□□ -0.59
SMG8-202ENST00000543872 SULT1A2P50226 295 aa11.37□□□□□ -0.59
SMG8-202ENST00000543872 ASPHD2Q6ICH7 369 aa11.37□□□□□ -0.59
SMG8-202ENST00000543872 SPNS3Q6ZMD2 512 aa11.37□□□□□ -0.59
SMG8-202ENST00000543872 OR52E1Q8NGJ3 308 aa11.37□□□□□ -0.59
SMG8-202ENST00000543872 MR1Q95460 341 aa11.37□□□□□ -0.59
SMG8-202ENST00000543872 NUDT9Q9BW91 350 aa11.37□□□□□ -0.59
SMG8-202ENST00000543872 NMES1Q9C002 83 aa11.37□□□□□ -0.59
SMG8-202ENST00000543872 SLC5A7Q9GZV3 580 aa11.37□□□□□ -0.59
SMG8-202ENST00000543872 METTL9Q9H1A3 318 aa11.37□□□□□ -0.59
SMG8-202ENST00000543872 FAM157AC9JC47 383 aa11.37□□□□□ -0.59
SMG8-202ENST00000543872 ELNP15502 786 aa11.37□□□□□ -0.59
SMG8-202ENST00000543872 ALOX5APP20292 161 aa11.37□□□□□ -0.59
SMG8-202ENST00000543872 RAP1AP62834 184 aa11.37□□□□□ -0.59
SMG8-202ENST00000543872 GPR18Q14330 331 aa11.37□□□□□ -0.59
SMG8-202ENST00000543872 HMGN3Q15651 99 aa11.37□□□□□ -0.59
SMG8-202ENST00000543872 ZNF550Q7Z398 422 aa11.37□□□□□ -0.59
SMG8-202ENST00000543872 MDGA2Q7Z553 956 aa11.37□□□□□ -0.59
SMG8-202ENST00000543872 ADGRE4PQ86SQ3 457 aa11.37□□□□□ -0.59
SMG8-202ENST00000543872 ZDHHC22Q8N966 263 aa11.37□□□□□ -0.59
SMG8-202ENST00000543872 SOCS4Q8WXH5 440 aa11.37□□□□□ -0.59
SMG8-202ENST00000543872 SPHK2Q9NRA0 654 aa11.37□□□□□ -0.59
SMG8-202ENST00000543872 PARPBPQ9NWS1 579 aa11.37□□□□□ -0.59
SMG8-202ENST00000543872 HCFC1R1Q9NWW0 138 aa11.37□□□□□ -0.59
SMG8-202ENST00000543872 KIF26BQ2KJY2 2108 aa11.37□□□□□ -0.59
SMG8-202ENST00000543872 TRBV6-7A0A0A0MS04 114 aa11.36□□□□□ -0.59
SMG8-202ENST00000543872 ZNF726A6NNF4 738 aa11.36□□□□□ -0.59
SMG8-202ENST00000543872 ARPC3O15145 178 aa11.36□□□□□ -0.59
SMG8-202ENST00000543872 C1QL1O75973 258 aa11.36□□□□□ -0.59
SMG8-202ENST00000543872 CT62P0C5K7 136 aa11.36□□□□□ -0.59
SMG8-202ENST00000543872 PKIAP61925 76 aa11.36□□□□□ -0.59
SMG8-202ENST00000543872 GALNTL5Q7Z4T8 443 aa11.36□□□□□ -0.59
SMG8-202ENST00000543872 MARCH3Q86UD3 253 aa11.36□□□□□ -0.59
SMG8-202ENST00000543872 GKN2Q86XP6 184 aa11.36□□□□□ -0.59
SMG8-202ENST00000543872 CDC20BQ86Y33 519 aa11.36□□□□□ -0.59
SMG8-202ENST00000543872 RCBTB1Q8NDN9 531 aa11.36□□□□□ -0.59
SMG8-202ENST00000543872 OR1J1Q8NGS3 322 aa11.36□□□□□ -0.59
SMG8-202ENST00000543872 OR10J5Q8NHC4 309 aa11.36□□□□□ -0.59
SMG8-202ENST00000543872 RNF128Q8TEB7 428 aa11.36□□□□□ -0.59
SMG8-202ENST00000543872 ZNF587Q96SQ5 575 aaPredicted RBP11.36□□□□□ -0.59
SMG8-202ENST00000543872 CDC6Q99741 560 aa11.36□□□□□ -0.59
SMG8-202ENST00000543872 DNAJB12Q9NXW2 375 aaKnown RBP11.36□□□□□ -0.59
SMG8-202ENST00000543872 SLC2A8Q9NY64 477 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms