RNA–Protein interactions for RNA: ENST00000543354.5

RPS6KC1-206, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best) BASIC

Gene RPS6KC1, Length 4,082 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-206ENST00000543354 TM4SF4P48230 202 aa12.52□□□□□ -0.4
RPS6KC1-206ENST00000543354 PPP1R1AQ13522 171 aa12.52□□□□□ -0.4
RPS6KC1-206ENST00000543354 WDR38Q5JTN6 314 aa12.52□□□□□ -0.4
RPS6KC1-206ENST00000543354 OR10AC1Q8NH08 325 aa12.52□□□□□ -0.4
RPS6KC1-206ENST00000543354 RNF128Q8TEB7 428 aa12.52□□□□□ -0.4
RPS6KC1-206ENST00000543354 TCTN2Q96GX1 697 aa12.52□□□□□ -0.4
RPS6KC1-206ENST00000543354 ASB16Q96NS5 453 aa12.52□□□□□ -0.4
RPS6KC1-206ENST00000543354 SLC25A31Q9H0C2 315 aa12.52□□□□□ -0.4
RPS6KC1-206ENST00000543354 LYRM4Q9HD34 91 aa12.52□□□□□ -0.4
RPS6KC1-206ENST00000543354 FOXJ3Q9UPW0 622 aa12.52□□□□□ -0.4
RPS6KC1-206ENST00000543354 GREB1LQ9C091 1923 aaPredicted RBP12.52□□□□□ -0.41
RPS6KC1-206ENST00000543354 H3BP45 60 aa12.52□□□□□ -0.41
RPS6KC1-206ENST00000543354 SLC17A2O00624 439 aa12.52□□□□□ -0.41
RPS6KC1-206ENST00000543354 ICOSLGO75144 302 aa12.52□□□□□ -0.41
RPS6KC1-206ENST00000543354 TMIGD3P0DMS9 266 aaPredicted RBP12.52□□□□□ -0.41
RPS6KC1-206ENST00000543354 FOLR1P15328 257 aa12.52□□□□□ -0.41
RPS6KC1-206ENST00000543354 CDKN2AP42771 156 aaKnown RBP12.52□□□□□ -0.41
RPS6KC1-206ENST00000543354 GPR85P60893 370 aa12.52□□□□□ -0.41
RPS6KC1-206ENST00000543354 FIP1L1Q6UN15 594 aaKnown RBP12.52□□□□□ -0.41
RPS6KC1-206ENST00000543354 LCN15Q6UWW0 184 aa12.52□□□□□ -0.41
RPS6KC1-206ENST00000543354 OR14A16Q8NHC5 309 aa12.52□□□□□ -0.41
RPS6KC1-206ENST00000543354 SAMD10Q9BYL1 202 aa12.52□□□□□ -0.41
RPS6KC1-206ENST00000543354 SERTAD4Q9NUC0 356 aa12.52□□□□□ -0.41
RPS6KC1-206ENST00000543354 OR14J1Q9UGF5 321 aa12.52□□□□□ -0.41
RPS6KC1-206ENST00000543354 SCAF4O95104 1147 aaKnown RBP12.52□□□□□ -0.41
RPS6KC1-206ENST00000543354 CD37P11049 281 aa12.52□□□□□ -0.41
RPS6KC1-206ENST00000543354 TLE1Q04724 770 aa12.52□□□□□ -0.41
RPS6KC1-206ENST00000543354 ZNF74Q16587 644 aa12.52□□□□□ -0.41
RPS6KC1-206ENST00000543354 NUBPLQ8TB37 319 aa12.52□□□□□ -0.41
RPS6KC1-206ENST00000543354 NKX2-4Q9H2Z4 354 aa12.52□□□□□ -0.41
RPS6KC1-206ENST00000543354 SCPEP1Q9HB40 452 aa12.52□□□□□ -0.41
RPS6KC1-206ENST00000543354 PTRH2Q9Y3E5 179 aaKnown RBP12.52□□□□□ -0.41
RPS6KC1-206ENST00000543354 KPTNQ9Y664 436 aa12.52□□□□□ -0.41
RPS6KC1-206ENST00000543354 WNK2Q9Y3S1 2297 aa12.51□□□□□ -0.41
RPS6KC1-206ENST00000543354 PRAMEF25A6NGN4 478 aa12.51□□□□□ -0.41
RPS6KC1-206ENST00000543354 LILRB5O75023 590 aa12.51□□□□□ -0.41
RPS6KC1-206ENST00000543354 CD38P28907 300 aa12.51□□□□□ -0.41
RPS6KC1-206ENST00000543354 CBLN3Q6UW01 205 aa12.51□□□□□ -0.41
RPS6KC1-206ENST00000543354 PARM1Q6UWI2 310 aa12.51□□□□□ -0.41
RPS6KC1-206ENST00000543354 H1FNTQ75WM6 255 aaPredicted RBP12.51□□□□□ -0.41
RPS6KC1-206ENST00000543354 LYG2Q86SG7 212 aa12.51□□□□□ -0.41
RPS6KC1-206ENST00000543354 PRSS35Q8N3Z0 413 aa12.51□□□□□ -0.41
RPS6KC1-206ENST00000543354 NECAP1Q8NC96 275 aa12.51□□□□□ -0.41
RPS6KC1-206ENST00000543354 SEMA6CQ9H3T2 930 aa12.51□□□□□ -0.41
RPS6KC1-206ENST00000543354 CA10Q9NS85 328 aa12.51□□□□□ -0.41
RPS6KC1-206ENST00000543354 SIPA1L1O43166 1804 aa12.51□□□□□ -0.41
RPS6KC1-206ENST00000543354 THSD7AQ9UPZ6 1657 aa12.51□□□□□ -0.41
RPS6KC1-206ENST00000543354 ST8SIA3O43173 380 aa12.51□□□□□ -0.41
RPS6KC1-206ENST00000543354 KCNAB3O43448 404 aa12.51□□□□□ -0.41
RPS6KC1-206ENST00000543354 BCL2L11O43521 198 aa12.51□□□□□ -0.41
RPS6KC1-206ENST00000543354 F12P00748 615 aaPredicted RBP12.51□□□□□ -0.41
RPS6KC1-206ENST00000543354 GABRA1P14867 456 aa12.51□□□□□ -0.41
RPS6KC1-206ENST00000543354 CTGFP29279 349 aa12.51□□□□□ -0.41
RPS6KC1-206ENST00000543354 VEGFBP49765 207 aa12.51□□□□□ -0.41
RPS6KC1-206ENST00000543354 MLF1P58340 268 aa12.51□□□□□ -0.41
RPS6KC1-206ENST00000543354 LPAL2Q16609 132 aa12.51□□□□□ -0.41
RPS6KC1-206ENST00000543354 ZXDCQ2QGD7 858 aaPredicted RBP12.51□□□□□ -0.41
RPS6KC1-206ENST00000543354 PWWP2BQ6NUJ5 590 aa12.51□□□□□ -0.41
RPS6KC1-206ENST00000543354 TRILQ7L0X0 811 aa12.51□□□□□ -0.41
RPS6KC1-206ENST00000543354 ISOC2Q96AB3 205 aa12.51□□□□□ -0.41
RPS6KC1-206ENST00000543354 CCDC74AQ96AQ1 378 aa12.51□□□□□ -0.41
RPS6KC1-206ENST00000543354 ZNF578Q96N58 590 aaPredicted RBP12.51□□□□□ -0.41
RPS6KC1-206ENST00000543354 LMAN1LQ9HAT1 526 aa12.51□□□□□ -0.41
RPS6KC1-206ENST00000543354 GPR173Q9NS66 373 aa12.51□□□□□ -0.41
RPS6KC1-206ENST00000543354 SLC22A11Q9NSA0 550 aa12.51□□□□□ -0.41
RPS6KC1-206ENST00000543354 KCNIP1Q9NZI2 227 aa12.51□□□□□ -0.41
RPS6KC1-206ENST00000543354 PIGLQ9Y2B2 252 aa12.51□□□□□ -0.41
RPS6KC1-206ENST00000543354 ARHGEF17Q96PE2 2063 aaPredicted RBP12.51□□□□□ -0.41
RPS6KC1-206ENST00000543354 MIA3Q5JRA6 1907 aa12.51□□□□□ -0.41
RPS6KC1-206ENST00000543354 CENPVL1A0A0U1RR11 272 aa12.51□□□□□ -0.41
RPS6KC1-206ENST00000543354 PRSS37A4D1T9 235 aa12.51□□□□□ -0.41
RPS6KC1-206ENST00000543354 OR5K3A6NET4 321 aa12.51□□□□□ -0.41
RPS6KC1-206ENST00000543354 CEBPZOSA8MTT3 80 aa12.51□□□□□ -0.41
RPS6KC1-206ENST00000543354 ADAP1O75689 374 aa12.51□□□□□ -0.41
RPS6KC1-206ENST00000543354 HPNP05981 417 aa12.51□□□□□ -0.41
RPS6KC1-206ENST00000543354 H2AFB1P0C5Y9 115 aa12.51□□□□□ -0.41
RPS6KC1-206ENST00000543354 DAOP14920 347 aa12.51□□□□□ -0.41
RPS6KC1-206ENST00000543354 ELLP55199 621 aaPredicted RBP12.51□□□□□ -0.41
RPS6KC1-206ENST00000543354 ZNF85Q03923 595 aa12.51□□□□□ -0.41
RPS6KC1-206ENST00000543354 FMODQ06828 376 aa12.51□□□□□ -0.41
RPS6KC1-206ENST00000543354 C17orf67Q0P5P2 114 aa12.51□□□□□ -0.41
RPS6KC1-206ENST00000543354 CDONQ4KMG0 1287 aa12.51□□□□□ -0.41
RPS6KC1-206ENST00000543354 MANEAQ5SRI9 462 aa12.51□□□□□ -0.41
RPS6KC1-206ENST00000543354 AADACL3Q5VUY0 350 aa12.51□□□□□ -0.41
RPS6KC1-206ENST00000543354 RNLSQ5VYX0 342 aa12.51□□□□□ -0.41
RPS6KC1-206ENST00000543354 SLC16A14Q7RTX9 510 aa12.51□□□□□ -0.41
RPS6KC1-206ENST00000543354 ZFP62Q8NB50 900 aaPredicted RBP12.51□□□□□ -0.41
RPS6KC1-206ENST00000543354 OR11H4Q8NGC9 324 aa12.51□□□□□ -0.41
RPS6KC1-206ENST00000543354 SCMH1Q96GD3 660 aa12.51□□□□□ -0.41
RPS6KC1-206ENST00000543354 PLEKHA3Q9HB20 300 aa12.51□□□□□ -0.41
RPS6KC1-206ENST00000543354 IL5P05113 134 aa12.5□□□□□ -0.41
RPS6KC1-206ENST00000543354 SULT1A3P0DMM9 295 aa12.5□□□□□ -0.41
RPS6KC1-206ENST00000543354 SULT1A4P0DMN0 295 aa12.5□□□□□ -0.41
RPS6KC1-206ENST00000543354 ABOP16442 354 aa12.5□□□□□ -0.41
RPS6KC1-206ENST00000543354 PDCD1Q15116 288 aa12.5□□□□□ -0.41
RPS6KC1-206ENST00000543354 IGSF11Q5DX21 431 aa12.5□□□□□ -0.41
RPS6KC1-206ENST00000543354 TMEM164Q5U3C3 297 aa12.5□□□□□ -0.41
RPS6KC1-206ENST00000543354 NOTCH3Q9UM47 2321 aa12.5□□□□□ -0.41
RPS6KC1-206ENST00000543354 A0A1W2PPV4 95 aa12.5□□□□□ -0.41
RPS6KC1-206ENST00000543354 OTOL1A6NHN0 477 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms