RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	C12orf49	Q9H741	205 aa		5.6	□□□□□ -1.51
CIT-213	ENST00000543324	EXOSC4	Q9NPD3	245 aa	Known RBP	5.6	□□□□□ -1.51
CIT-213	ENST00000543324	ZNF275	Q9NSD4	429 aa	Predicted RBP	5.6	□□□□□ -1.51
CIT-213	ENST00000543324	SNTG1	Q9NSN8	517 aa		5.6	□□□□□ -1.51
CIT-213	ENST00000543324	MRPS18A	Q9NVS2	196 aa	Known RBP	5.6	□□□□□ -1.51
CIT-213	ENST00000543324	MCUB	Q9NWR8	336 aa		5.6	□□□□□ -1.51
CIT-213	ENST00000543324	NDUFAF4	Q9P032	175 aa		5.6	□□□□□ -1.51
CIT-213	ENST00000543324	KLHL9	Q9P2J3	617 aa		5.6	□□□□□ -1.51
CIT-213	ENST00000543324	CHRNA9	Q9UGM1	479 aa		5.6	□□□□□ -1.51
CIT-213	ENST00000543324	UBQLN2	Q9UHD9	624 aa		5.6	□□□□□ -1.51
CIT-213	ENST00000543324	TMCC3	Q9ULS5	477 aa		5.6	□□□□□ -1.51
CIT-213	ENST00000543324	DIMT1	Q9UNQ2	313 aa	Known RBP	5.6	□□□□□ -1.51
CIT-213	ENST00000543324	RPL36	Q9Y3U8	105 aa	Known RBP	5.6	□□□□□ -1.51
CIT-213	ENST00000543324	WDR45	Q9Y484	360 aa		5.6	□□□□□ -1.51
CIT-213	ENST00000543324	CHST2	Q9Y4C5	530 aa		5.6	□□□□□ -1.51
CIT-213	ENST00000543324	NPTN	Q9Y639	398 aa		5.6	□□□□□ -1.51
CIT-213	ENST00000543324	IGHV3-15	A0A0B4J1V0	119 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	LOC100289279	A0A1B0GTE1	492 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	TRDV1	A0A1B0GX56	115 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	TMEM129	A0AVI4	362 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	CDHR4	A6H8M9	788 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	ELOA3D	A6NLF2	546 aa	Predicted RBP	5.59	□□□□□ -1.51
CIT-213	ENST00000543324	SHISA9	B4DS77	424 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	KRBOX1	C9JBD0	128 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	C3orf84	H3BNL1	204 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	GTPBP1	O00178	669 aa	Known RBP	5.59	□□□□□ -1.51
CIT-213	ENST00000543324	ZNF208	O43345	1280 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	CHP2	O43745	196 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	PRKY	O43930	277 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	RAMP1	O60894	148 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	NPIPB7	O75200	414 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	NUDT14	O95848	222 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	ADA	P00813	363 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	ANXA3	P12429	323 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	PRKACA	P17612	351 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	C4BPB	P20851	252 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	GAL	P22466	123 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	IGHV1-2	P23083	117 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	FKBP2	P26885	142 aa	Known RBP	5.59	□□□□□ -1.51
CIT-213	ENST00000543324	SLC6A1	P30531	599 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	SRP14	P37108	136 aa	Known RBP	5.59	□□□□□ -1.51
CIT-213	ENST00000543324	ACAA2	P42765	397 aa	Known RBP	5.59	□□□□□ -1.51
CIT-213	ENST00000543324	IDH2	P48735	452 aa	Known RBP	5.59	□□□□□ -1.51
CIT-213	ENST00000543324	EVX1	P49640	407 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	P2RY4	P51582	365 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	MAP2K6	P52564	334 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	HILS1	P60008	231 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	DSTN	P60981	165 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	SNRPD2	P62316	118 aa	Known RBP	5.59	□□□□□ -1.51
CIT-213	ENST00000543324	CSNK2A1	P68400	391 aa	Predicted RBP	5.59	□□□□□ -1.51
CIT-213	ENST00000543324	S100A12	P80511	92 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	DHODH	Q02127	395 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	RASGEF1B	Q0VAM2	473 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	HNRNPA0	Q13151	305 aa	Known RBP	5.59	□□□□□ -1.51
CIT-213	ENST00000543324	PTGES3	Q15185	160 aa	Known RBP	5.59	□□□□□ -1.51
CIT-213	ENST00000543324	TSC22D1	Q15714	1073 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	SYPL1	Q16563	259 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	PGGHG	Q32M88	737 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	ELOA3B	Q3SY89	546 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	PLA1A	Q53H76	456 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	KPRP	Q5T749	579 aa	Predicted RBP	5.59	□□□□□ -1.51
CIT-213	ENST00000543324	MZT2A	Q6P582	158 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	PTCHD4	Q6ZW05	846 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	UTS2B	Q765I0	119 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	SSX8	Q7RTT4	187 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	C16orf62	Q7Z3J2	963 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	DTX2	Q86UW9	622 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	LSR	Q86X29	649 aa	Predicted RBP	5.59	□□□□□ -1.51
CIT-213	ENST00000543324	LINC00518	Q8N0U6	118 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324		Q8N402	240 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	ZNF433	Q8N7K0	673 aa	Predicted RBP	5.59	□□□□□ -1.51
CIT-213	ENST00000543324	ZNF614	Q8N883	585 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	UXS1	Q8NBZ7	420 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	SLC37A3	Q8NCC5	494 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	C11orf65	Q8NCR3	313 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	ELOA3	Q8NG57	546 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	XAGE5	Q8WWM1	108 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	TMEM234	Q8WY98	164 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	ACOT12	Q8WYK0	555 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	HSD17B8	Q92506	261 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	CNOT9	Q92600	299 aa	Known RBP	5.59	□□□□□ -1.51
CIT-213	ENST00000543324	RBPMS	Q93062	196 aa	Known RBP	5.59	□□□□□ -1.51
CIT-213	ENST00000543324	KISS1R	Q969F8	398 aa	Predicted RBP	5.59	□□□□□ -1.51
CIT-213	ENST00000543324	OR5B2	Q96R09	309 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	NIPSNAP1	Q9BPW8	284 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	POLR2J2	Q9GZM3	115 aa	Known RBP	5.59	□□□□□ -1.51
CIT-213	ENST00000543324	GHITM	Q9H3K2	345 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	FGF20	Q9NP95	211 aa	Predicted RBP	5.59	□□□□□ -1.51
CIT-213	ENST00000543324	FANCF	Q9NPI8	374 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	CTPS2	Q9NRF8	586 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	PRSS50	Q9UI38	385 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	ATPIF1	Q9UII2	106 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	LIPT1	Q9Y234	373 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	GSTK1	Q9Y2Q3	226 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	SF3B6	Q9Y3B4	125 aa	Known RBP	5.59	□□□□□ -1.51
CIT-213	ENST00000543324	HDGFL3	Q9Y3E1	203 aa		5.59	□□□□□ -1.51
CIT-213	ENST00000543324	ALPK2	Q86TB3	2170 aa		5.59	□□□□□ -1.52
CIT-213	ENST00000543324	MEIKIN	A0A087WXM9	373 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324		A0A1W2PRG6	482 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	hCG_1807616	A0A1W2PRN6	198 aa		5.58	□□□□□ -1.52

Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms