RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 PLEKHF2Q9H8W4 249 aa10.52□□□□□ -0.73
DDX55-210ENST00000543016 CA10Q9NS85 328 aa10.52□□□□□ -0.73
DDX55-210ENST00000543016 A0A1W2PQL4 384 aaPredicted RBP10.51□□□□□ -0.73
DDX55-210ENST00000543016 DAPL1A0PJW8 107 aa10.51□□□□□ -0.73
DDX55-210ENST00000543016 E7EQL1 145 aa10.51□□□□□ -0.73
DDX55-210ENST00000543016 F5H5K5 113 aa10.51□□□□□ -0.73
DDX55-210ENST00000543016 IGHA1P01876 353 aa10.51□□□□□ -0.73
DDX55-210ENST00000543016 PSKH1P11801 424 aa10.51□□□□□ -0.73
DDX55-210ENST00000543016 BMP4P12644 408 aa10.51□□□□□ -0.73
DDX55-210ENST00000543016 CCL2P13500 99 aa10.51□□□□□ -0.73
DDX55-210ENST00000543016 RIDAP52758 137 aaKnown RBP10.51□□□□□ -0.73
DDX55-210ENST00000543016 ACTA2P62736 377 aa10.51□□□□□ -0.73
DDX55-210ENST00000543016 ACTG2P63267 376 aa10.51□□□□□ -0.73
DDX55-210ENST00000543016 MRPL28Q13084 256 aaKnown RBP10.51□□□□□ -0.73
DDX55-210ENST00000543016 SNTB2Q13425 540 aaKnown RBP10.51□□□□□ -0.73
DDX55-210ENST00000543016 RSPO1Q2MKA7 263 aaPredicted RBP10.51□□□□□ -0.73
DDX55-210ENST00000543016 ZNF829Q3KNS6 432 aaPredicted RBP10.51□□□□□ -0.73
DDX55-210ENST00000543016 AGAP6Q5VW22 663 aa10.51□□□□□ -0.73
DDX55-210ENST00000543016 FBXL14Q8N1E6 418 aa10.51□□□□□ -0.73
DDX55-210ENST00000543016 PAQR4Q8N4S7 273 aaPredicted RBP10.51□□□□□ -0.73
DDX55-210ENST00000543016 LILRB1Q8NHL6 650 aaPredicted RBP10.51□□□□□ -0.73
DDX55-210ENST00000543016 SNX33Q8WV41 574 aa10.51□□□□□ -0.73
DDX55-210ENST00000543016 DOK1Q99704 481 aa10.51□□□□□ -0.73
DDX55-210ENST00000543016 AMBNQ9NP70 447 aa10.51□□□□□ -0.73
DDX55-210ENST00000543016 CHCHD3Q9NX63 227 aaKnown RBP10.51□□□□□ -0.73
DDX55-210ENST00000543016 AASSQ9UDR5 926 aa10.51□□□□□ -0.73
DDX55-210ENST00000543016 BLOC1S6Q9UL45 172 aa10.51□□□□□ -0.73
DDX55-210ENST00000543016 TPRKBQ9Y3C4 175 aa10.51□□□□□ -0.73
DDX55-210ENST00000543016 GRIP1Q9Y3R0 1128 aa10.51□□□□□ -0.73
DDX55-210ENST00000543016 CMAHPQ9Y471 501 aa10.51□□□□□ -0.73
DDX55-210ENST00000543016 METTL15A6NJ78 407 aa10.5□□□□□ -0.73
DDX55-210ENST00000543016 SMPD2O60906 423 aa10.5□□□□□ -0.73
DDX55-210ENST00000543016 FAM20BO75063 409 aa10.5□□□□□ -0.73
DDX55-210ENST00000543016 PLAUP00749 431 aa10.5□□□□□ -0.73
DDX55-210ENST00000543016 LCKP06239 509 aa10.5□□□□□ -0.73
DDX55-210ENST00000543016 RPSAP08865 295 aaKnown RBP10.5□□□□□ -0.73
DDX55-210ENST00000543016 MYL12AP19105 171 aa10.5□□□□□ -0.73
DDX55-210ENST00000543016 CFL1P23528 166 aaKnown RBP10.5□□□□□ -0.73
DDX55-210ENST00000543016 SERPINF1P36955 418 aa10.5□□□□□ -0.73
DDX55-210ENST00000543016 WNT5AP41221 380 aa10.5□□□□□ -0.73
DDX55-210ENST00000543016 FABP6P51161 128 aa10.5□□□□□ -0.73
DDX55-210ENST00000543016 MMP16P51512 607 aa10.5□□□□□ -0.73
DDX55-210ENST00000543016 HCCSP53701 268 aa10.5□□□□□ -0.73
DDX55-210ENST00000543016 PSMA6P60900 246 aaKnown RBP10.5□□□□□ -0.73
DDX55-210ENST00000543016 PPP1CBP62140 327 aa10.5□□□□□ -0.73
DDX55-210ENST00000543016 SPOCK1Q08629 439 aa10.5□□□□□ -0.73
DDX55-210ENST00000543016 MALLQ13021 153 aa10.5□□□□□ -0.73
DDX55-210ENST00000543016 GALEQ14376 348 aa10.5□□□□□ -0.73
DDX55-210ENST00000543016 EFNB3Q15768 340 aa10.5□□□□□ -0.73
DDX55-210ENST00000543016 SMN1Q16637 294 aaKnown RBP10.5□□□□□ -0.73
DDX55-210ENST00000543016 ZNF718Q3SXZ3 478 aa10.5□□□□□ -0.73
DDX55-210ENST00000543016 RGS7BPQ6MZT1 257 aaPredicted RBP10.5□□□□□ -0.73
DDX55-210ENST00000543016 FAM220AQ7Z4H9 259 aa10.5□□□□□ -0.73
DDX55-210ENST00000543016 SYS1Q8N2H4 156 aa10.5□□□□□ -0.73
DDX55-210ENST00000543016 ZNF283Q8N7M2 679 aa10.5□□□□□ -0.73
DDX55-210ENST00000543016 BPIFB6Q8NFQ5 453 aa10.5□□□□□ -0.73
DDX55-210ENST00000543016 OR52I1Q8NGK6 324 aa10.5□□□□□ -0.73
DDX55-210ENST00000543016 ABHD4Q8TB40 342 aa10.5□□□□□ -0.73
DDX55-210ENST00000543016 SMAP2Q8WU79 429 aaPredicted RBP10.5□□□□□ -0.73
DDX55-210ENST00000543016 TMEM171Q8WVE6 324 aa10.5□□□□□ -0.73
DDX55-210ENST00000543016 MYDGFQ969H8 173 aa10.5□□□□□ -0.73
DDX55-210ENST00000543016 TMEM80Q96HE8 168 aa10.5□□□□□ -0.73
DDX55-210ENST00000543016 AMELYQ99218 206 aa10.5□□□□□ -0.73
DDX55-210ENST00000543016 YTHDF1Q9BYJ9 559 aaKnown RBP10.5□□□□□ -0.73
DDX55-210ENST00000543016 RGCCQ9H4X1 137 aa10.5□□□□□ -0.73
DDX55-210ENST00000543016 OPA3Q9H6K4 179 aa10.5□□□□□ -0.73
DDX55-210ENST00000543016 MOB1AQ9H8S9 216 aa10.5□□□□□ -0.73
DDX55-210ENST00000543016 PSORS1C1Q9UIG5 152 aa10.5□□□□□ -0.73
DDX55-210ENST00000543016 GPR160Q9UJ42 338 aa10.5□□□□□ -0.73
DDX55-210ENST00000543016 ZNF391Q9UJN7 358 aa10.5□□□□□ -0.73
DDX55-210ENST00000543016 IKZF2Q9UKS7 526 aa10.5□□□□□ -0.73
DDX55-210ENST00000543016 DIMT1Q9UNQ2 313 aaKnown RBP10.5□□□□□ -0.73
DDX55-210ENST00000543016 COPS3Q9UNS2 423 aa10.5□□□□□ -0.73
DDX55-210ENST00000543016 KLHDC2Q9Y2U9 406 aa10.5□□□□□ -0.73
DDX55-210ENST00000543016 EXOSC1Q9Y3B2 195 aaKnown RBP10.5□□□□□ -0.73
DDX55-210ENST00000543016 FLNBO75369 2602 aaKnown RBP10.49□□□□□ -0.73
DDX55-210ENST00000543016 B9A039 149 aa10.49□□□□□ -0.73
DDX55-210ENST00000543016 LCATP04180 440 aa10.49□□□□□ -0.73
DDX55-210ENST00000543016 DBHP09172 617 aa10.49□□□□□ -0.73
DDX55-210ENST00000543016 FAM157BP0CG42 384 aa10.49□□□□□ -0.73
DDX55-210ENST00000543016 ZNF250P15622 560 aa10.49□□□□□ -0.73
DDX55-210ENST00000543016 GCH1P30793 250 aa10.49□□□□□ -0.73
DDX55-210ENST00000543016 TTKP33981 857 aa10.49□□□□□ -0.73
DDX55-210ENST00000543016 THBS4P35443 961 aa10.49□□□□□ -0.73
DDX55-210ENST00000543016 SLC6A9P48067 706 aa10.49□□□□□ -0.73
DDX55-210ENST00000543016 CX3CR1P49238 355 aa10.49□□□□□ -0.73
DDX55-210ENST00000543016 PRKXP51817 358 aa10.49□□□□□ -0.73
DDX55-210ENST00000543016 ZNF85Q03923 595 aa10.49□□□□□ -0.73
DDX55-210ENST00000543016 CDONQ4KMG0 1287 aa10.49□□□□□ -0.73
DDX55-210ENST00000543016 RBM48Q5RL73 367 aaKnown RBP10.49□□□□□ -0.73
DDX55-210ENST00000543016 ZNF684Q5T5D7 378 aa10.49□□□□□ -0.73
DDX55-210ENST00000543016 RNLSQ5VYX0 342 aa10.49□□□□□ -0.73
DDX55-210ENST00000543016 MBNL2Q5VZF2 373 aaKnown RBP10.49□□□□□ -0.73
DDX55-210ENST00000543016 LAIR2Q6ISS4 152 aa10.49□□□□□ -0.73
DDX55-210ENST00000543016 LRRN1Q6UXK5 716 aa10.49□□□□□ -0.73
DDX55-210ENST00000543016 TMPRSS11AQ6ZMR5 421 aa10.49□□□□□ -0.73
DDX55-210ENST00000543016 DTX2Q86UW9 622 aa10.49□□□□□ -0.73
DDX55-210ENST00000543016 ZNF101Q8IZC7 436 aa10.49□□□□□ -0.73
DDX55-210ENST00000543016 MUC15Q8N387 334 aa10.49□□□□□ -0.73
DDX55-210ENST00000543016 ZNF540Q8NDQ6 660 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms