RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 SOHLH2Q9NX45 425 aa11.56□□□□□ -0.56
DDX11-223ENST00000542838 RHBDD3Q9Y3P4 386 aa11.56□□□□□ -0.56
DDX11-223ENST00000542838 SOX1O00570 391 aaPredicted RBP11.55□□□□□ -0.56
DDX11-223ENST00000542838 PLPP3O14495 311 aa11.55□□□□□ -0.56
DDX11-223ENST00000542838 SEMA4FO95754 770 aa11.55□□□□□ -0.56
DDX11-223ENST00000542838 ACTL6AO96019 429 aa11.55□□□□□ -0.56
DDX11-223ENST00000542838 ISG15P05161 165 aa11.55□□□□□ -0.56
DDX11-223ENST00000542838 GNB3P16520 340 aa11.55□□□□□ -0.56
DDX11-223ENST00000542838 PVALBP20472 110 aaPredicted RBP11.55□□□□□ -0.56
DDX11-223ENST00000542838 CTHP32929 405 aa11.55□□□□□ -0.56
DDX11-223ENST00000542838 NR0B1P51843 470 aaKnown RBP11.55□□□□□ -0.56
DDX11-223ENST00000542838 POLR2HP52434 150 aaKnown RBP11.55□□□□□ -0.56
DDX11-223ENST00000542838 FAHD2BQ6P2I3 314 aaPredicted RBP11.55□□□□□ -0.56
DDX11-223ENST00000542838 LYPD6Q86Y78 171 aa11.55□□□□□ -0.56
DDX11-223ENST00000542838 FAHD2AQ96GK7 314 aa11.55□□□□□ -0.56
DDX11-223ENST00000542838 SELENOIQ9C0D9 397 aa11.55□□□□□ -0.56
DDX11-223ENST00000542838 FBXO9Q9UK97 447 aaPredicted RBP11.55□□□□□ -0.56
DDX11-223ENST00000542838 XIRP2A4UGR9 3374 aa11.55□□□□□ -0.56
DDX11-223ENST00000542838 A0A0B4J2A0 478 aa11.55□□□□□ -0.56
DDX11-223ENST00000542838 TMEM150CB9EJG8 249 aa11.55□□□□□ -0.56
DDX11-223ENST00000542838 DUS4LO95620 317 aaKnown RBP11.55□□□□□ -0.56
DDX11-223ENST00000542838 PMP2P02689 132 aa11.55□□□□□ -0.56
DDX11-223ENST00000542838 HLA-DOBP13765 273 aa11.55□□□□□ -0.56
DDX11-223ENST00000542838 UNC119Q13432 240 aa11.55□□□□□ -0.56
DDX11-223ENST00000542838 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.55□□□□□ -0.56
DDX11-223ENST00000542838 STOML3Q8TAV4 291 aa11.55□□□□□ -0.56
DDX11-223ENST00000542838 ARL11Q969Q4 196 aa11.55□□□□□ -0.56
DDX11-223ENST00000542838 SHPKQ9UHJ6 478 aa11.55□□□□□ -0.56
DDX11-223ENST00000542838 TCRBV21S2A2A0A5A6 115 aa11.54□□□□□ -0.56
DDX11-223ENST00000542838 OR6C76A6NM76 312 aa11.54□□□□□ -0.56
DDX11-223ENST00000542838 A8MVM7 634 aa11.54□□□□□ -0.56
DDX11-223ENST00000542838 F8VVB4 439 aa11.54□□□□□ -0.56
DDX11-223ENST00000542838 F8VWA3 439 aa11.54□□□□□ -0.56
DDX11-223ENST00000542838 PRAMEF26H0Y7S4 382 aa11.54□□□□□ -0.56
DDX11-223ENST00000542838 LINC01565O15544 149 aa11.54□□□□□ -0.56
DDX11-223ENST00000542838 MTRF1O75570 445 aaKnown RBP11.54□□□□□ -0.56
DDX11-223ENST00000542838 SRSF3P84103 164 aaKnown RBP11.54□□□□□ -0.56
DDX11-223ENST00000542838 FMODQ06828 376 aa11.54□□□□□ -0.56
DDX11-223ENST00000542838 AIMP2Q13155 320 aaKnown RBP11.54□□□□□ -0.56
DDX11-223ENST00000542838 PLEKHN1Q494U1 663 aaPredicted RBP11.54□□□□□ -0.56
DDX11-223ENST00000542838 HLA-DQA1Q5Y7H0 255 aa11.54□□□□□ -0.56
DDX11-223ENST00000542838 OR52N4Q8NGI2 321 aa11.54□□□□□ -0.56
DDX11-223ENST00000542838 MARCH1Q8TCQ1 289 aa11.54□□□□□ -0.56
DDX11-223ENST00000542838 LANCL2Q9NS86 450 aa11.54□□□□□ -0.56
DDX11-223ENST00000542838 SPTY2D1-AS1A0A0U1RR47 76 aa11.54□□□□□ -0.56
DDX11-223ENST00000542838 ZNF98A6NK75 572 aa11.54□□□□□ -0.56
DDX11-223ENST00000542838 NPIPB7O75200 414 aa11.54□□□□□ -0.56
DDX11-223ENST00000542838 AHSA1O95433 338 aa11.54□□□□□ -0.56
DDX11-223ENST00000542838 H2BFMP0C1H6 154 aa11.54□□□□□ -0.56
DDX11-223ENST00000542838 THEGLP0DJG4 465 aa11.54□□□□□ -0.56
DDX11-223ENST00000542838 SLC26A5P58743 744 aa11.54□□□□□ -0.56
DDX11-223ENST00000542838 CTAG1AP78358 180 aa11.54□□□□□ -0.56
DDX11-223ENST00000542838 FZD2Q14332 565 aa11.54□□□□□ -0.56
DDX11-223ENST00000542838 STK11Q15831 433 aa11.54□□□□□ -0.56
DDX11-223ENST00000542838 RAB11FIP2Q7L804 512 aa11.54□□□□□ -0.56
DDX11-223ENST00000542838 BAP18Q8IXM2 172 aa11.54□□□□□ -0.56
DDX11-223ENST00000542838 SPAG16Q8N0X2 631 aa11.54□□□□□ -0.56
DDX11-223ENST00000542838 ELP5Q8TE02 316 aa11.54□□□□□ -0.56
DDX11-223ENST00000542838 ZNF721Q8TF20 911 aa11.54□□□□□ -0.56
DDX11-223ENST00000542838 RNF141Q8WVD5 230 aa11.54□□□□□ -0.56
DDX11-223ENST00000542838 CNTNAP3BQ96NU0 1288 aa11.54□□□□□ -0.56
DDX11-223ENST00000542838 FN3KRPQ9HA64 309 aa11.54□□□□□ -0.56
DDX11-223ENST00000542838 TREM1Q9NP99 234 aa11.54□□□□□ -0.56
DDX11-223ENST00000542838 THADAQ6YHU6 1953 aa11.54□□□□□ -0.56
DDX11-223ENST00000542838 TEX13DA0A0J9YY54 714 aaPredicted RBP11.54□□□□□ -0.56
DDX11-223ENST00000542838 ALG1L2C9J202 215 aa11.54□□□□□ -0.56
DDX11-223ENST00000542838 H0YIG0 161 aa11.54□□□□□ -0.56
DDX11-223ENST00000542838 IGHMP01871 453 aa11.54□□□□□ -0.56
DDX11-223ENST00000542838 VSIG8P0DPA2 414 aa11.54□□□□□ -0.56
DDX11-223ENST00000542838 CD79AP11912 226 aa11.54□□□□□ -0.56
DDX11-223ENST00000542838 OR1D4P47884 311 aa11.54□□□□□ -0.56
DDX11-223ENST00000542838 PLCXD2Q0VAA5 305 aa11.54□□□□□ -0.56
DDX11-223ENST00000542838 NKAPLQ5M9Q1 402 aa11.54□□□□□ -0.56
DDX11-223ENST00000542838 H3F3CQ6NXT2 135 aa11.54□□□□□ -0.56
DDX11-223ENST00000542838 ZNF248Q8NDW4 579 aa11.54□□□□□ -0.56
DDX11-223ENST00000542838 SLC26A10Q8NG04 563 aa11.54□□□□□ -0.56
DDX11-223ENST00000542838 ST7LQ8TDW4 575 aa11.54□□□□□ -0.56
DDX11-223ENST00000542838 TMED6Q8WW62 240 aa11.54□□□□□ -0.56
DDX11-223ENST00000542838 ZNF768Q9H5H4 540 aaKnown RBP11.54□□□□□ -0.56
DDX11-223ENST00000542838 TMEM231Q9H6L2 316 aa11.54□□□□□ -0.56
DDX11-223ENST00000542838 DDAH2O95865 285 aa11.53□□□□□ -0.56
DDX11-223ENST00000542838 F12P00748 615 aaPredicted RBP11.53□□□□□ -0.56
DDX11-223ENST00000542838 IGKV3-11P04433 115 aa11.53□□□□□ -0.56
DDX11-223ENST00000542838 IL11P20809 199 aa11.53□□□□□ -0.56
DDX11-223ENST00000542838 HSD11B1P28845 292 aa11.53□□□□□ -0.56
DDX11-223ENST00000542838 GABRA4P48169 554 aa11.53□□□□□ -0.56
DDX11-223ENST00000542838 HOXA1P49639 335 aaPredicted RBP11.53□□□□□ -0.56
DDX11-223ENST00000542838 TMPPEQ6ZT21 453 aa11.53□□□□□ -0.56
DDX11-223ENST00000542838 RTN4RL2Q86UN3 420 aa11.53□□□□□ -0.56
DDX11-223ENST00000542838 SLC30A7Q8NEW0 376 aa11.53□□□□□ -0.56
DDX11-223ENST00000542838 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.53□□□□□ -0.56
DDX11-223ENST00000542838 TLNRD1Q9H1K6 362 aa11.53□□□□□ -0.56
DDX11-223ENST00000542838 PTGES2Q9H7Z7 377 aa11.53□□□□□ -0.56
DDX11-223ENST00000542838 A0A1W2PQD3 144 aa11.53□□□□□ -0.56
DDX11-223ENST00000542838 DBX1A6NMT0 343 aa11.53□□□□□ -0.56
DDX11-223ENST00000542838 TSPAN2O60636 221 aa11.53□□□□□ -0.56
DDX11-223ENST00000542838 IGHV4-34P06331 123 aa11.53□□□□□ -0.56
DDX11-223ENST00000542838 DHRS7BQ6IAN0 325 aaPredicted RBP11.53□□□□□ -0.56
DDX11-223ENST00000542838 SLC22A24Q8N4F4 322 aa11.53□□□□□ -0.56
DDX11-223ENST00000542838 DTWD2Q8NBA8 298 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms