RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 NPSR1Q6W5P4 371 aa7.4□□□□□ -1.23
PRKAB1-207ENST00000542698 PPP1R3BQ86XI6 285 aa7.4□□□□□ -1.23
PRKAB1-207ENST00000542698 CMTM1Q8IZ96 169 aa7.4□□□□□ -1.23
PRKAB1-207ENST00000542698 CCDC54Q8NEL0 328 aa7.4□□□□□ -1.23
PRKAB1-207ENST00000542698 GJC3Q8NFK1 279 aa7.4□□□□□ -1.23
PRKAB1-207ENST00000542698 OR11H4Q8NGC9 324 aa7.4□□□□□ -1.23
PRKAB1-207ENST00000542698 GPR119Q8TDV5 335 aa7.4□□□□□ -1.23
PRKAB1-207ENST00000542698 ST8SIA1Q92185 356 aa7.4□□□□□ -1.23
PRKAB1-207ENST00000542698 TCEAL3Q969E4 200 aa7.4□□□□□ -1.23
PRKAB1-207ENST00000542698 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.4□□□□□ -1.23
PRKAB1-207ENST00000542698 A0A0B4J293 547 aa7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 PIGBOS1A0A0B4J2F0 54 aa7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 TMEM272A0A1B0GTI8 110 aa7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 STMND1H3BQB6 276 aa7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 H3BUI4 141 aa7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 HRKO00198 91 aa7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 SCRG1O75711 98 aa7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 GABRG2P18507 467 aa7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 LAP3P28838 519 aa7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 GPR85P60893 370 aa7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 SLC35A1P78382 337 aa7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 PLGLB1Q02325 96 aa7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 OR52W1Q6IF63 320 aa7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 OR10AC1Q8NH08 325 aa7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 STT3BQ8TCJ2 826 aa7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 GPBAR1Q8TDU6 330 aa7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 RRNAD1Q96FB5 475 aaKnown RBP7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 ZNF285Q96NJ3 590 aa7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 TSPAN32Q96QS1 320 aa7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 TAF9BQ9HBM6 251 aa7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 GPR84Q9NQS5 396 aa7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 ZNF275Q9NSD4 429 aaPredicted RBP7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 PCOLCE2Q9UKZ9 415 aa7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 PCDHGA1Q9Y5H4 931 aa7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 ARPC4-TTLL3A0A0A6YYG9 625 aa7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 SHOXO15266 292 aa7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 BCL2L11O43521 198 aa7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 TPPPO94811 219 aa7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 TBX6O95947 436 aaPredicted RBP7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 IFNA17P01571 189 aa7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 NANOS3P60323 173 aaKnown RBP7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 DCDP81605 110 aaKnown RBP7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 BAMBIQ13145 260 aa7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 CD226Q15762 336 aa7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 TOMM34Q15785 309 aaPredicted RBP7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 NKAIN1Q4KMZ8 207 aa7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 TMEM128Q5BJH2 165 aa7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 THEM4Q5T1C6 240 aa7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 CHRDL2Q6WN34 429 aa7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 DOK3Q7L591 496 aa7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 SLC38A6Q8IZM9 456 aa7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 CRIPAKQ8N1N5 446 aa7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 RFLNBQ8N5W9 214 aa7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 DTWD2Q8NBA8 298 aa7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 OR11G2Q8NGC1 345 aa7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 NUDT9Q9BW91 350 aa7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 PBOV1Q9GZY1 135 aa7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 EXOSC3Q9NQT5 275 aaKnown RBP7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 KLF15Q9UIH9 416 aa7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 NRG2O14511 850 aaPredicted RBP7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 CTLA4P16410 223 aa7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 COL9A1P20849 921 aa7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 EIF1P41567 113 aaKnown RBP7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 ATP1B3P54709 279 aa7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 ZNF117Q03924 483 aa7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 SRSF5Q13243 272 aaKnown RBP7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 SHHQ15465 462 aa7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 C1QL3Q5VWW1 255 aa7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 B3GNTL1Q67FW5 361 aaPredicted RBP7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 ESX1Q8N693 406 aa7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 CLRN3Q8NCR9 226 aa7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 OR10Z1Q8NGY1 313 aa7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 PIGCQ92535 297 aa7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 PIGTQ969N2 578 aa7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 LINC00052Q96N35 136 aa7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 SMCO4Q9NRQ5 59 aa7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 ZMIZ1Q9ULJ6 1067 aa7.39□□□□□ -1.23
PRKAB1-207ENST00000542698 A0A1W2PNR3 127 aa7.38□□□□□ -1.23
PRKAB1-207ENST00000542698 BCAT2O15382 392 aaPredicted RBP7.38□□□□□ -1.23
PRKAB1-207ENST00000542698 IFNA2P01563 188 aa7.38□□□□□ -1.23
PRKAB1-207ENST00000542698 SERPINE2P07093 398 aa7.38□□□□□ -1.23
PRKAB1-207ENST00000542698 QDPRP09417 244 aa7.38□□□□□ -1.23
PRKAB1-207ENST00000542698 CT45A8P0DMV1 189 aa7.38□□□□□ -1.23
PRKAB1-207ENST00000542698 CT45A9P0DMV2 189 aa7.38□□□□□ -1.23
PRKAB1-207ENST00000542698 DPP4P27487 766 aa7.38□□□□□ -1.23
PRKAB1-207ENST00000542698 ABCD3P28288 659 aa7.38□□□□□ -1.23
PRKAB1-207ENST00000542698 HOXC12P31275 282 aa7.38□□□□□ -1.23
PRKAB1-207ENST00000542698 CD80P33681 288 aa7.38□□□□□ -1.23
PRKAB1-207ENST00000542698 AFF3P51826 1226 aaKnown RBP7.38□□□□□ -1.23
PRKAB1-207ENST00000542698 EPHA4P54764 986 aa7.38□□□□□ -1.23
PRKAB1-207ENST00000542698 GRB2P62993 217 aaKnown RBP7.38□□□□□ -1.23
PRKAB1-207ENST00000542698 SMUG1Q53HV7 270 aa7.38□□□□□ -1.23
PRKAB1-207ENST00000542698 CT45A2Q5DJT8 189 aa7.38□□□□□ -1.23
PRKAB1-207ENST00000542698 TMEM164Q5U3C3 297 aa7.38□□□□□ -1.23
PRKAB1-207ENST00000542698 ATG4DQ86TL0 474 aaPredicted RBP7.38□□□□□ -1.23
PRKAB1-207ENST00000542698 OR5M9Q8NGP3 310 aa7.38□□□□□ -1.23
PRKAB1-207ENST00000542698 OR6C1Q96RD1 312 aa7.38□□□□□ -1.23
PRKAB1-207ENST00000542698 TMEM231Q9H6L2 316 aa7.38□□□□□ -1.23
PRKAB1-207ENST00000542698 ZNF286AQ9HBT8 521 aa7.38□□□□□ -1.23
PRKAB1-207ENST00000542698 ZFP64Q9NPA5 681 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms