RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 RPS19BP1Q86WX3 136 aaKnown RBP14.48□□□□□ -0.09
VARS2-212ENST00000542001 MUC20Q8N307 709 aaPredicted RBP14.48□□□□□ -0.09
VARS2-212ENST00000542001 EDAQ92838 391 aa14.48□□□□□ -0.09
VARS2-212ENST00000542001 ZC3H10Q96K80 434 aaKnown RBP14.48□□□□□ -0.09
VARS2-212ENST00000542001 PAPOLGQ9BWT3 736 aaKnown RBP14.48□□□□□ -0.09
VARS2-212ENST00000542001 FOXJ3Q9UPW0 622 aa14.48□□□□□ -0.09
VARS2-212ENST00000542001 PIGLQ9Y2B2 252 aa14.48□□□□□ -0.09
VARS2-212ENST00000542001 MN1Q10571 1320 aaPredicted RBP14.48□□□□□ -0.09
VARS2-212ENST00000542001 A0A096LPE4 126 aa14.48□□□□□ -0.09
VARS2-212ENST00000542001 A0A1W2PPZ6 126 aa14.48□□□□□ -0.09
VARS2-212ENST00000542001 C5orf67F2Z3F1 127 aa14.48□□□□□ -0.09
VARS2-212ENST00000542001 OR4E1P0C645 316 aa14.48□□□□□ -0.09
VARS2-212ENST00000542001 PTBP1P26599 531 aaKnown RBP eCLIP14.48□□□□□ -0.091e-7■■■■■ 29.2
VARS2-212ENST00000542001 GPR3P46089 330 aa14.48□□□□□ -0.09
VARS2-212ENST00000542001 MEF2DQ14814 521 aa14.48□□□□□ -0.09
VARS2-212ENST00000542001 TDHQ8IZJ6 230 aa14.48□□□□□ -0.09
VARS2-212ENST00000542001 DLL4Q9NR61 685 aa14.48□□□□□ -0.09
VARS2-212ENST00000542001 CLEC1BQ9P126 229 aa14.48□□□□□ -0.09
VARS2-212ENST00000542001 COL4A6Q14031 1691 aa14.48□□□□□ -0.09
VARS2-212ENST00000542001 SIGLEC5O15389 551 aa14.48□□□□□ -0.09
VARS2-212ENST00000542001 KCNAB3O43448 404 aa14.48□□□□□ -0.09
VARS2-212ENST00000542001 IL11P20809 199 aa14.48□□□□□ -0.09
VARS2-212ENST00000542001 AGFG1P52594 562 aaKnown RBP14.48□□□□□ -0.09
VARS2-212ENST00000542001 P2RX3P56373 397 aa14.48□□□□□ -0.09
VARS2-212ENST00000542001 SIGLEC14Q08ET2 396 aa14.48□□□□□ -0.09
VARS2-212ENST00000542001 CDONQ4KMG0 1287 aa14.48□□□□□ -0.09
VARS2-212ENST00000542001 OR4D10Q8NGI6 311 aa14.48□□□□□ -0.09
VARS2-212ENST00000542001 OR1N1Q8NGS0 311 aa14.48□□□□□ -0.09
VARS2-212ENST00000542001 FNDC9Q8TBE3 224 aa14.48□□□□□ -0.09
VARS2-212ENST00000542001 PHYHIPQ92561 330 aa14.48□□□□□ -0.09
VARS2-212ENST00000542001 ALKBH3Q96Q83 286 aaPredicted RBP14.48□□□□□ -0.09
VARS2-212ENST00000542001 CHST6Q9GZX3 395 aa14.48□□□□□ -0.09
VARS2-212ENST00000542001 ZMIZ1Q9ULJ6 1067 aa14.48□□□□□ -0.09
VARS2-212ENST00000542001 OR5H14A6NHG9 310 aa14.47□□□□□ -0.09
VARS2-212ENST00000542001 FAM166BA8MTA8 275 aa14.47□□□□□ -0.09
VARS2-212ENST00000542001 MASP2O00187 686 aa14.47□□□□□ -0.09
VARS2-212ENST00000542001 LPLP06858 475 aa14.47□□□□□ -0.09
VARS2-212ENST00000542001 MYBPHQ13203 477 aa14.47□□□□□ -0.09
VARS2-212ENST00000542001 DYRK1AQ13627 763 aa14.47□□□□□ -0.09
VARS2-212ENST00000542001 ZNF169Q14929 603 aaPredicted RBP14.47□□□□□ -0.09
VARS2-212ENST00000542001 OPN5Q6U736 354 aa14.47□□□□□ -0.09
VARS2-212ENST00000542001 LRRTM1Q86UE6 522 aa14.47□□□□□ -0.09
VARS2-212ENST00000542001 ESX1Q8N693 406 aa14.47□□□□□ -0.09
VARS2-212ENST00000542001 DUSP18Q8NEJ0 188 aa14.47□□□□□ -0.09
VARS2-212ENST00000542001 OR5T1Q8NG75 326 aa14.47□□□□□ -0.09
VARS2-212ENST00000542001 OR1M1Q8NGA1 313 aa14.47□□□□□ -0.09
VARS2-212ENST00000542001 MENTQ9BUN1 341 aa14.47□□□□□ -0.09
VARS2-212ENST00000542001 CFHR5Q9BXR6 569 aa14.47□□□□□ -0.09
VARS2-212ENST00000542001 B3GNT2Q9NY97 397 aa14.47□□□□□ -0.09
VARS2-212ENST00000542001 FRG2CA6NGY1 282 aa14.47□□□□□ -0.09
VARS2-212ENST00000542001 CCL7P80098 99 aa14.47□□□□□ -0.09
VARS2-212ENST00000542001 FAM189A2Q15884 450 aa14.47□□□□□ -0.09
VARS2-212ENST00000542001 TMEM88Q6PEY1 159 aa14.47□□□□□ -0.09
VARS2-212ENST00000542001 OR4D6Q8NGJ1 314 aa14.47□□□□□ -0.09
VARS2-212ENST00000542001 PTPMT1Q8WUK0 201 aaPredicted RBP14.47□□□□□ -0.09
VARS2-212ENST00000542001 OR10A2Q9H208 303 aa14.47□□□□□ -0.09
VARS2-212ENST00000542001 NXT1Q9UKK6 140 aaKnown RBP14.47□□□□□ -0.09
VARS2-212ENST00000542001 GLB1P16278 677 aa14.47□□□□□ -0.09
VARS2-212ENST00000542001 MSX1P28360 303 aa14.47□□□□□ -0.09
VARS2-212ENST00000542001 CAMLGP49069 296 aa14.47□□□□□ -0.09
VARS2-212ENST00000542001 HSD17B11Q8NBQ5 300 aa14.47□□□□□ -0.09
VARS2-212ENST00000542001 SECTM1Q8WVN6 248 aa14.47□□□□□ -0.09
VARS2-212ENST00000542001 APOBEC4Q8WW27 367 aaKnown RBP14.47□□□□□ -0.09
VARS2-212ENST00000542001 SLC19A3Q9BZV2 496 aa14.47□□□□□ -0.09
VARS2-212ENST00000542001 PBOV1Q9GZY1 135 aa14.47□□□□□ -0.09
VARS2-212ENST00000542001 ZNF121P58317 390 aaPredicted RBP14.46□□□□□ -0.09
VARS2-212ENST00000542001 Q5BKY6 102 aa14.46□□□□□ -0.09
VARS2-212ENST00000542001 OR52N4Q8NGI2 321 aa14.46□□□□□ -0.09
VARS2-212ENST00000542001 GDF2Q9UK05 429 aaPredicted RBP14.46□□□□□ -0.09
VARS2-212ENST00000542001 ZNF223Q9UK11 482 aaPredicted RBP14.46□□□□□ -0.09
VARS2-212ENST00000542001 PTP4A3O75365 173 aa14.46□□□□□ -0.09
VARS2-212ENST00000542001 EFEMP2O95967 443 aa14.46□□□□□ -0.09
VARS2-212ENST00000542001 UBCP0CG48 685 aaKnown RBP14.46□□□□□ -0.09
VARS2-212ENST00000542001 PPT1P50897 306 aa14.46□□□□□ -0.09
VARS2-212ENST00000542001 SLC37A1P57057 533 aa14.46□□□□□ -0.09
VARS2-212ENST00000542001 UBE2IP63279 158 aaKnown RBP14.46□□□□□ -0.09
VARS2-212ENST00000542001 MFGE8Q08431 387 aaPredicted RBP14.46□□□□□ -0.09
VARS2-212ENST00000542001 GNMTQ14749 295 aa14.46□□□□□ -0.09
VARS2-212ENST00000542001 IAH1Q2TAA2 248 aaPredicted RBP14.46□□□□□ -0.09
VARS2-212ENST00000542001 OGFOD3Q6PK18 319 aa14.46□□□□□ -0.09
VARS2-212ENST00000542001 SYT13Q7L8C5 426 aa14.46□□□□□ -0.09
VARS2-212ENST00000542001 PPP1R1CQ8WVI7 109 aa14.46□□□□□ -0.09
VARS2-212ENST00000542001 RADILQ96JH8 1075 aa14.46□□□□□ -0.09
VARS2-212ENST00000542001 TMEM184BQ9Y519 407 aaPredicted RBP14.46□□□□□ -0.09
VARS2-212ENST00000542001 XRCC3O43542 346 aa14.46□□□□□ -0.09
VARS2-212ENST00000542001 SULT1B1O43704 296 aa14.46□□□□□ -0.09
VARS2-212ENST00000542001 ZNF44P15621 663 aa14.46□□□□□ -0.09
VARS2-212ENST00000542001 DUSP1P28562 367 aa14.46□□□□□ -0.09
VARS2-212ENST00000542001 SERPINF1P36955 418 aa14.46□□□□□ -0.09
VARS2-212ENST00000542001 PNLIPRP2P54317 469 aa14.46□□□□□ -0.09
VARS2-212ENST00000542001 STK11Q15831 433 aa14.46□□□□□ -0.09
VARS2-212ENST00000542001 MRPL21Q7Z2W9 205 aaKnown RBP14.46□□□□□ -0.09
VARS2-212ENST00000542001 NR2C2APQ86WQ0 139 aa14.46□□□□□ -0.09
VARS2-212ENST00000542001 KCNG3Q8TAE7 436 aa14.46□□□□□ -0.09
VARS2-212ENST00000542001 ROBO4Q8WZ75 1007 aa14.46□□□□□ -0.09
VARS2-212ENST00000542001 MED30Q96HR3 178 aa14.46□□□□□ -0.09
VARS2-212ENST00000542001 RAB22AQ9UL26 194 aa14.46□□□□□ -0.09
VARS2-212ENST00000542001 TSC2P49815 1807 aa14.46□□□□□ -0.1
VARS2-212ENST00000542001 GLSO94925 669 aaPredicted RBP14.46□□□□□ -0.1
VARS2-212ENST00000542001 CD53P19397 219 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms