RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 C8orf4Q9NR00 106 aa4.68□□□□□ -1.66
CPSF7-220ENST00000541963 ADPRHL2Q9NX46 363 aa4.68□□□□□ -1.66
CPSF7-220ENST00000541963 RSL24D1Q9UHA3 163 aaKnown RBP4.68□□□□□ -1.66
CPSF7-220ENST00000541963 B3GALT5Q9Y2C3 310 aa4.68□□□□□ -1.66
CPSF7-220ENST00000541963 MAGED1Q9Y5V3 778 aaPredicted RBP4.68□□□□□ -1.66
CPSF7-220ENST00000541963 PKDREJQ9NTG1 2253 aa4.68□□□□□ -1.66
CPSF7-220ENST00000541963 MPDZO75970 2070 aa4.68□□□□□ -1.66
CPSF7-220ENST00000541963 A0A087WUJ7 227 aa4.67□□□□□ -1.66
CPSF7-220ENST00000541963 A0A1B0GWA3 101 aa4.67□□□□□ -1.66
CPSF7-220ENST00000541963 ELOVL7A1L3X0 281 aa4.67□□□□□ -1.66
CPSF7-220ENST00000541963 FAM220BPB1ANY3 271 aa4.67□□□□□ -1.66
CPSF7-220ENST00000541963 ARHGEF9O43307 516 aa4.67□□□□□ -1.66
CPSF7-220ENST00000541963 IDH3BO43837 385 aa4.67□□□□□ -1.66
CPSF7-220ENST00000541963 TPST1O60507 370 aa4.67□□□□□ -1.66
CPSF7-220ENST00000541963 NPIPB7O75200 414 aa4.67□□□□□ -1.66
CPSF7-220ENST00000541963 GCM2O75603 506 aaPredicted RBP4.67□□□□□ -1.66
CPSF7-220ENST00000541963 TRMUO75648 421 aaKnown RBP4.67□□□□□ -1.66
CPSF7-220ENST00000541963 GAGE7O76087 117 aa4.67□□□□□ -1.66
CPSF7-220ENST00000541963 OR6A2O95222 327 aa4.67□□□□□ -1.66
CPSF7-220ENST00000541963 GAGE12FP0CL80 117 aa4.67□□□□□ -1.66
CPSF7-220ENST00000541963 GAGE12GP0CL81 117 aa4.67□□□□□ -1.66
CPSF7-220ENST00000541963 GAGE12IP0CL82 117 aa4.67□□□□□ -1.66
CPSF7-220ENST00000541963 COX4I1P13073 169 aa4.67□□□□□ -1.66
CPSF7-220ENST00000541963 ANPEPP15144 967 aa4.67□□□□□ -1.66
CPSF7-220ENST00000541963 IGHV1-2P23083 117 aa4.67□□□□□ -1.66
CPSF7-220ENST00000541963 RPS5P46782 204 aaKnown RBP4.67□□□□□ -1.66
CPSF7-220ENST00000541963 ESRRGP62508 458 aa4.67□□□□□ -1.66
CPSF7-220ENST00000541963 HOXC5Q00444 222 aa4.67□□□□□ -1.66
CPSF7-220ENST00000541963 IL1RL1Q01638 556 aa4.67□□□□□ -1.66
CPSF7-220ENST00000541963 GAGE1Q13065 139 aa4.67□□□□□ -1.66
CPSF7-220ENST00000541963 GAGE4Q13068 117 aa4.67□□□□□ -1.66
CPSF7-220ENST00000541963 SELPLGQ14242 412 aa4.67□□□□□ -1.66
CPSF7-220ENST00000541963 SLC17A1Q14916 467 aa4.67□□□□□ -1.66
CPSF7-220ENST00000541963 SPCS2Q15005 226 aa4.67□□□□□ -1.66
CPSF7-220ENST00000541963 PPA1Q15181 289 aa4.67□□□□□ -1.66
CPSF7-220ENST00000541963 NPTX1Q15818 432 aa4.67□□□□□ -1.66
CPSF7-220ENST00000541963 STK11Q15831 433 aa4.67□□□□□ -1.66
CPSF7-220ENST00000541963 DUSP7Q16829 419 aa4.67□□□□□ -1.66
CPSF7-220ENST00000541963 ODF3L2Q3SX64 289 aa4.67□□□□□ -1.66
CPSF7-220ENST00000541963 CGB2Q6NT52 195 aa4.67□□□□□ -1.66
CPSF7-220ENST00000541963 PAMR1Q6UXH9 720 aa4.67□□□□□ -1.66
CPSF7-220ENST00000541963 CASP12Q6UXS9 341 aa4.67□□□□□ -1.66
CPSF7-220ENST00000541963 IZUMO2Q6UXV1 221 aa4.67□□□□□ -1.66
CPSF7-220ENST00000541963 CREB3L2Q70SY1 520 aa4.67□□□□□ -1.66
CPSF7-220ENST00000541963 C10orf111Q8N326 155 aa4.67□□□□□ -1.66
CPSF7-220ENST00000541963 C17orf78Q8N4C9 275 aa4.67□□□□□ -1.66
CPSF7-220ENST00000541963 C10orf53Q8N6V4 93 aa4.67□□□□□ -1.66
CPSF7-220ENST00000541963 RBM15BQ8NDT2 890 aaKnown RBP4.67□□□□□ -1.66
CPSF7-220ENST00000541963 OR2T12Q8NG77 320 aa4.67□□□□□ -1.66
CPSF7-220ENST00000541963 OR9K2Q8NGE7 335 aa4.67□□□□□ -1.66
CPSF7-220ENST00000541963 ZNF420Q8TAQ5 688 aaPredicted RBP4.67□□□□□ -1.66
CPSF7-220ENST00000541963 HIST1H2ACQ93077 130 aa4.67□□□□□ -1.66
CPSF7-220ENST00000541963 DNAJA3Q96EY1 480 aa4.67□□□□□ -1.66
CPSF7-220ENST00000541963 RADILQ96JH8 1075 aa4.67□□□□□ -1.66
CPSF7-220ENST00000541963 MUS81Q96NY9 551 aa4.67□□□□□ -1.66
CPSF7-220ENST00000541963 OXGR1Q96P68 337 aa4.67□□□□□ -1.66
CPSF7-220ENST00000541963 ARHGDIGQ99819 225 aa4.67□□□□□ -1.66
CPSF7-220ENST00000541963 TMEM43Q9BTV4 400 aa4.67□□□□□ -1.66
CPSF7-220ENST00000541963 POLR2J2Q9GZM3 115 aaKnown RBP4.67□□□□□ -1.66
CPSF7-220ENST00000541963 POLR2J3Q9H1A7 115 aaKnown RBP4.67□□□□□ -1.66
CPSF7-220ENST00000541963 SLCO5A1Q9H2Y9 848 aa4.67□□□□□ -1.66
CPSF7-220ENST00000541963 PLEKHF2Q9H8W4 249 aa4.67□□□□□ -1.66
CPSF7-220ENST00000541963 UBTD1Q9HAC8 227 aa4.67□□□□□ -1.66
CPSF7-220ENST00000541963 TAS2R16Q9NYV7 291 aa4.67□□□□□ -1.66
CPSF7-220ENST00000541963 MGAT4BQ9UQ53 548 aa4.67□□□□□ -1.66
CPSF7-220ENST00000541963 PLEKHA6Q9Y2H5 1048 aa4.67□□□□□ -1.66
CPSF7-220ENST00000541963 AP4S1Q9Y587 144 aa4.67□□□□□ -1.66
CPSF7-220ENST00000541963 FLVCR1Q9Y5Y0 555 aa4.67□□□□□ -1.66
CPSF7-220ENST00000541963 SPTAN1Q13813 2472 aaKnown RBP4.66□□□□□ -1.66
CPSF7-220ENST00000541963 A0A0B4J2E0 115 aa4.66□□□□□ -1.66
CPSF7-220ENST00000541963 LOC102725191A0A1B0GVB3 256 aa4.66□□□□□ -1.66
CPSF7-220ENST00000541963 A0A1B0GX12 115 aa4.66□□□□□ -1.66
CPSF7-220ENST00000541963 TRAPPC13A5PLN9 417 aa4.66□□□□□ -1.66
CPSF7-220ENST00000541963 HTR3EA5X5Y0 456 aa4.66□□□□□ -1.66
CPSF7-220ENST00000541963 OR5H1A6NKK0 313 aa4.66□□□□□ -1.66
CPSF7-220ENST00000541963 CPSF4LA6NMK7 179 aaKnown RBP4.66□□□□□ -1.66
CPSF7-220ENST00000541963 ZNF726A6NNF4 738 aa4.66□□□□□ -1.66
CPSF7-220ENST00000541963 DEFB108AA8MXU0 73 aa4.66□□□□□ -1.66
CPSF7-220ENST00000541963 ZNF587BE7ETH6 402 aa4.66□□□□□ -1.66
CPSF7-220ENST00000541963 CHP2O43745 196 aa4.66□□□□□ -1.66
CPSF7-220ENST00000541963 SMPD2O60906 423 aa4.66□□□□□ -1.66
CPSF7-220ENST00000541963 ENTPD5O75356 428 aa4.66□□□□□ -1.66
CPSF7-220ENST00000541963 RAD51DO75771 328 aa4.66□□□□□ -1.66
CPSF7-220ENST00000541963 LYZL6O75951 148 aa4.66□□□□□ -1.66
CPSF7-220ENST00000541963 MT-ATP6P00846 226 aa4.66□□□□□ -1.66
CPSF7-220ENST00000541963 IGHV3-9P01782 118 aa4.66□□□□□ -1.66
CPSF7-220ENST00000541963 OPN1SWP03999 348 aa4.66□□□□□ -1.66
CPSF7-220ENST00000541963 THRBP10828 461 aa4.66□□□□□ -1.66
CPSF7-220ENST00000541963 MMP9P14780 707 aa4.66□□□□□ -1.66
CPSF7-220ENST00000541963 COX5AP20674 150 aa4.66□□□□□ -1.66
CPSF7-220ENST00000541963 AHCYP23526 432 aa4.66□□□□□ -1.66
CPSF7-220ENST00000541963 PTAFRP25105 342 aa4.66□□□□□ -1.66
CPSF7-220ENST00000541963 HTR2AP28223 471 aa4.66□□□□□ -1.66
CPSF7-220ENST00000541963 PRDX6P30041 224 aa4.66□□□□□ -1.66
CPSF7-220ENST00000541963 GRPRP30550 384 aa4.66□□□□□ -1.66
CPSF7-220ENST00000541963 CCKARP32238 428 aa4.66□□□□□ -1.66
CPSF7-220ENST00000541963 KDELR2P33947 212 aa4.66□□□□□ -1.66
CPSF7-220ENST00000541963 GZMMP51124 257 aa4.66□□□□□ -1.66
CPSF7-220ENST00000541963 TAS2R41P59536 307 aa4.66□□□□□ -1.66
CPSF7-220ENST00000541963 SEC61BP60468 96 aaKnown RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms