RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 WT1P19544 449 aaPredicted RBP4.69□□□□□ -1.66
DDB1-219ENST00000541513 GPD1P21695 349 aa4.69□□□□□ -1.66
DDB1-219ENST00000541513 FASP25445 335 aa4.69□□□□□ -1.66
DDB1-219ENST00000541513 HOXD3P31249 432 aaPredicted RBP4.69□□□□□ -1.66
DDB1-219ENST00000541513 SDC4P31431 198 aa4.69□□□□□ -1.66
DDB1-219ENST00000541513 XCR1P46094 333 aa4.69□□□□□ -1.66
DDB1-219ENST00000541513 ZFP36L2P47974 494 aaKnown RBP4.69□□□□□ -1.66
DDB1-219ENST00000541513 XKP51811 444 aa4.69□□□□□ -1.66
DDB1-219ENST00000541513 XGP55808 180 aa4.69□□□□□ -1.66
DDB1-219ENST00000541513 CLDN6P56747 220 aa4.69□□□□□ -1.66
DDB1-219ENST00000541513 UBE2MP61081 183 aaKnown RBP4.69□□□□□ -1.66
DDB1-219ENST00000541513 BNIP2Q12982 314 aa4.69□□□□□ -1.66
DDB1-219ENST00000541513 LAGE3Q14657 143 aa4.69□□□□□ -1.66
DDB1-219ENST00000541513 PDGFRLQ15198 375 aa4.69□□□□□ -1.66
DDB1-219ENST00000541513 SPA17Q15506 151 aa4.69□□□□□ -1.66
DDB1-219ENST00000541513 LTB4RQ15722 352 aa4.69□□□□□ -1.66
DDB1-219ENST00000541513 GUK1Q16774 197 aa4.69□□□□□ -1.66
DDB1-219ENST00000541513 KCTD19Q17RG1 926 aaPredicted RBP4.69□□□□□ -1.66
DDB1-219ENST00000541513 TIGITQ495A1 244 aa4.69□□□□□ -1.66
DDB1-219ENST00000541513 COX19Q49B96 90 aa4.69□□□□□ -1.66
DDB1-219ENST00000541513 OTUD1Q5VV17 481 aaPredicted RBP4.69□□□□□ -1.66
DDB1-219ENST00000541513 TYW3Q6IPR3 259 aaKnown RBP4.69□□□□□ -1.66
DDB1-219ENST00000541513 DCUN1D2Q6PH85 259 aa4.69□□□□□ -1.66
DDB1-219ENST00000541513 NPSR1Q6W5P4 371 aa4.69□□□□□ -1.66
DDB1-219ENST00000541513 STRADAQ7RTN6 431 aa4.69□□□□□ -1.66
DDB1-219ENST00000541513 SSX7Q7RTT5 188 aa4.69□□□□□ -1.66
DDB1-219ENST00000541513 C16orf82Q7Z2V1 217 aa4.69□□□□□ -1.66
DDB1-219ENST00000541513 NUFIP2Q7Z417 695 aaKnown RBP4.69□□□□□ -1.66
DDB1-219ENST00000541513 UBALD2Q8IYN6 164 aa4.69□□□□□ -1.66
DDB1-219ENST00000541513 PRSS58Q8IYP2 241 aa4.69□□□□□ -1.66
DDB1-219ENST00000541513 CYP4Z2PQ8N1L4 340 aa4.69□□□□□ -1.66
DDB1-219ENST00000541513 KIR3DL3Q8N743 410 aa4.69□□□□□ -1.66
DDB1-219ENST00000541513 RBMXL3Q8N7X1 1067 aaKnown RBP4.69□□□□□ -1.66
DDB1-219ENST00000541513 PNLDC1Q8NA58 520 aaKnown RBP4.69□□□□□ -1.66
DDB1-219ENST00000541513 NEXN-AS1Q8NBZ9 246 aa4.69□□□□□ -1.66
DDB1-219ENST00000541513 ACBD4Q8NC06 268 aa4.69□□□□□ -1.66
DDB1-219ENST00000541513 OR2T12Q8NG77 320 aa4.69□□□□□ -1.66
DDB1-219ENST00000541513 OR6K2Q8NGY2 324 aa4.69□□□□□ -1.66
DDB1-219ENST00000541513 OR2L2Q8NH16 312 aa4.69□□□□□ -1.66
DDB1-219ENST00000541513 RNASE11Q8TAA1 199 aaKnown RBP4.69□□□□□ -1.66
DDB1-219ENST00000541513 JOSD2Q8TAC2 188 aa4.69□□□□□ -1.66
DDB1-219ENST00000541513 ZNF564Q8TBZ8 553 aaPredicted RBP4.69□□□□□ -1.66
DDB1-219ENST00000541513 RXFP2Q8WXD0 754 aa4.69□□□□□ -1.66
DDB1-219ENST00000541513 LINC00476Q8WZB0 136 aa4.69□□□□□ -1.66
DDB1-219ENST00000541513 S100PBPQ96BU1 408 aa4.69□□□□□ -1.66
DDB1-219ENST00000541513 MCEEQ96PE7 176 aa4.69□□□□□ -1.66
DDB1-219ENST00000541513 OR5B2Q96R09 309 aa4.69□□□□□ -1.66
DDB1-219ENST00000541513 PLA2G2FQ9BZM2 168 aa4.69□□□□□ -1.66
DDB1-219ENST00000541513 PELI2Q9HAT8 420 aa4.69□□□□□ -1.66
DDB1-219ENST00000541513 FGF20Q9NP95 211 aaPredicted RBP4.69□□□□□ -1.66
DDB1-219ENST00000541513 FAIMQ9NVQ4 179 aa4.69□□□□□ -1.66
DDB1-219ENST00000541513 TAS2R9Q9NYW1 312 aa4.69□□□□□ -1.66
DDB1-219ENST00000541513 MSRB1Q9NZV6 116 aa4.69□□□□□ -1.66
DDB1-219ENST00000541513 SLC22A13Q9Y226 551 aa4.69□□□□□ -1.66
DDB1-219ENST00000541513 PDE10AQ9Y233 779 aa4.69□□□□□ -1.66
DDB1-219ENST00000541513 CSNK1G3Q9Y6M4 447 aa4.69□□□□□ -1.66
DDB1-219ENST00000541513 SPAG17Q6Q759 2223 aa4.69□□□□□ -1.66
DDB1-219ENST00000541513 LINC00587B1AMM8 73 aa4.68□□□□□ -1.66
DDB1-219ENST00000541513 SLC22A1O15245 554 aa4.68□□□□□ -1.66
DDB1-219ENST00000541513 CTNSO60931 367 aa4.68□□□□□ -1.66
DDB1-219ENST00000541513 CDK2AP2O75956 126 aa4.68□□□□□ -1.66
DDB1-219ENST00000541513 VAMP5O95183 116 aa4.68□□□□□ -1.66
DDB1-219ENST00000541513 ESRRBO95718 433 aa4.68□□□□□ -1.66
DDB1-219ENST00000541513 LINC00614P0C842 121 aa4.68□□□□□ -1.66
DDB1-219ENST00000541513 HKR1P10072 659 aa4.68□□□□□ -1.66
DDB1-219ENST00000541513 HLA-GP17693 338 aa4.68□□□□□ -1.66
DDB1-219ENST00000541513 BRWD1-AS2P59051 145 aa4.68□□□□□ -1.66
DDB1-219ENST00000541513 GNG2P59768 71 aa4.68□□□□□ -1.66
DDB1-219ENST00000541513 PSME3P61289 254 aa4.68□□□□□ -1.66
DDB1-219ENST00000541513 ERVS71-1P61550 626 aa4.68□□□□□ -1.66
DDB1-219ENST00000541513 C2orf80Q0P641 193 aa4.68□□□□□ -1.66
DDB1-219ENST00000541513 ILF3Q12906 894 aaKnown RBP eCLIP4.68□□□□□ -1.66
DDB1-219ENST00000541513 RUNX3Q13761 415 aa4.68□□□□□ -1.66
DDB1-219ENST00000541513 GTF2H2Q13888 395 aa4.68□□□□□ -1.66
DDB1-219ENST00000541513 NDUFA9Q16795 377 aa4.68□□□□□ -1.66
DDB1-219ENST00000541513 DUSP7Q16829 419 aa4.68□□□□□ -1.66
DDB1-219ENST00000541513 FAM106AQ4KMX7 169 aa4.68□□□□□ -1.66
DDB1-219ENST00000541513 AKIRIN2Q53H80 203 aa4.68□□□□□ -1.66
DDB1-219ENST00000541513 DCAF10Q5QP82 559 aa4.68□□□□□ -1.66
DDB1-219ENST00000541513 RBM48Q5RL73 367 aaKnown RBP4.68□□□□□ -1.66
DDB1-219ENST00000541513 TIMM23BQ5SRD1 257 aa4.68□□□□□ -1.66
DDB1-219ENST00000541513 OR2G6Q5TZ20 316 aa4.68□□□□□ -1.66
DDB1-219ENST00000541513 PRAMEF17Q5VTA0 474 aa4.68□□□□□ -1.66
DDB1-219ENST00000541513 HACD4Q5VWC8 232 aa4.68□□□□□ -1.66
DDB1-219ENST00000541513 GTF2H2CQ6P1K8 395 aa4.68□□□□□ -1.66
DDB1-219ENST00000541513 ZNF793Q6ZN11 406 aa4.68□□□□□ -1.66
DDB1-219ENST00000541513 SSX6Q7RTT6 188 aa4.68□□□□□ -1.66
DDB1-219ENST00000541513 OR4N5Q8IXE1 308 aa4.68□□□□□ -1.66
DDB1-219ENST00000541513 OR5T2Q8NGG2 359 aa4.68□□□□□ -1.66
DDB1-219ENST00000541513 OR52H1Q8NGJ2 320 aa4.68□□□□□ -1.66
DDB1-219ENST00000541513 OR2V1Q8NHB1 315 aa4.68□□□□□ -1.66
DDB1-219ENST00000541513 Q8TCH9 128 aa4.68□□□□□ -1.66
DDB1-219ENST00000541513 ZPLD1Q8TCW7 415 aa4.68□□□□□ -1.66
DDB1-219ENST00000541513 C22orf15Q8WYQ4 148 aa4.68□□□□□ -1.66
DDB1-219ENST00000541513 MAFIPQ8WZ33 124 aa4.68□□□□□ -1.66
DDB1-219ENST00000541513 AP3S1Q92572 193 aa4.68□□□□□ -1.66
DDB1-219ENST00000541513 NEIL2Q969S2 332 aa4.68□□□□□ -1.66
DDB1-219ENST00000541513 CENPNQ96H22 339 aaPredicted RBP4.68□□□□□ -1.66
DDB1-219ENST00000541513 ITCHQ96J02 903 aa4.68□□□□□ -1.66
DDB1-219ENST00000541513 BTN2A3PQ96KV6 586 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms