RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 H2BFMP0C1H6 154 aa8.1□□□□□ -1.11
DDX55-208ENST00000541259 ATP6V1B1P15313 513 aa8.1□□□□□ -1.11
DDX55-208ENST00000541259 CRYGSP22914 178 aa8.1□□□□□ -1.11
DDX55-208ENST00000541259 STOMP27105 288 aa8.1□□□□□ -1.11
DDX55-208ENST00000541259 PRKXP51817 358 aa8.1□□□□□ -1.11
DDX55-208ENST00000541259 GTF2A1P52655 376 aaPredicted RBP8.1□□□□□ -1.11
DDX55-208ENST00000541259 GALK2Q01415 458 aa8.1□□□□□ -1.11
DDX55-208ENST00000541259 ROM1Q03395 351 aa8.1□□□□□ -1.11
DDX55-208ENST00000541259 EGR3Q06889 387 aa8.1□□□□□ -1.11
DDX55-208ENST00000541259 TAF13Q15543 124 aa8.1□□□□□ -1.11
DDX55-208ENST00000541259 KRTAP27-1Q3LI81 207 aa8.1□□□□□ -1.11
DDX55-208ENST00000541259 LIPNQ5VXI9 398 aa8.1□□□□□ -1.11
DDX55-208ENST00000541259 XAF1Q6GPH4 301 aa8.1□□□□□ -1.11
DDX55-208ENST00000541259 KCTD18Q6PI47 426 aaPredicted RBP8.1□□□□□ -1.11
DDX55-208ENST00000541259 CLEC18BQ6UXF7 455 aa8.1□□□□□ -1.11
DDX55-208ENST00000541259 DPPA2Q7Z7J5 298 aa8.1□□□□□ -1.11
DDX55-208ENST00000541259 KLBQ86Z14 1044 aa8.1□□□□□ -1.11
DDX55-208ENST00000541259 WFDC8Q8IUA0 241 aa8.1□□□□□ -1.11
DDX55-208ENST00000541259 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.1□□□□□ -1.11
DDX55-208ENST00000541259 KLHL36Q8N4N3 616 aa8.1□□□□□ -1.11
DDX55-208ENST00000541259 PAQR4Q8N4S7 273 aaPredicted RBP8.1□□□□□ -1.11
DDX55-208ENST00000541259 CLEC18CQ8NCF0 446 aa8.1□□□□□ -1.11
DDX55-208ENST00000541259 PPP1R14AQ96A00 147 aa8.1□□□□□ -1.11
DDX55-208ENST00000541259 PELI1Q96FA3 418 aa8.1□□□□□ -1.11
DDX55-208ENST00000541259 LRRC46Q96FV0 321 aa8.1□□□□□ -1.11
DDX55-208ENST00000541259 POM121L2Q96KW2 1035 aa8.1□□□□□ -1.11
DDX55-208ENST00000541259 COQ7Q99807 217 aa8.1□□□□□ -1.11
DDX55-208ENST00000541259 MED18Q9BUE0 208 aa8.1□□□□□ -1.11
DDX55-208ENST00000541259 MROQ9BYG7 248 aa8.1□□□□□ -1.11
DDX55-208ENST00000541259 HDHD2Q9H0R4 259 aa8.1□□□□□ -1.11
DDX55-208ENST00000541259 OBP2BQ9NPH6 170 aa8.1□□□□□ -1.11
DDX55-208ENST00000541259 ACOT13Q9NPJ3 140 aa8.1□□□□□ -1.11
DDX55-208ENST00000541259 DDX28Q9NUL7 540 aaKnown RBP8.1□□□□□ -1.11
DDX55-208ENST00000541259 ACOXLQ9NUZ1 547 aa8.1□□□□□ -1.11
DDX55-208ENST00000541259 CRNNQ9UBG3 495 aaPredicted RBP8.1□□□□□ -1.11
DDX55-208ENST00000541259 ERGIC3Q9Y282 383 aa8.1□□□□□ -1.11
DDX55-208ENST00000541259 CAB39Q9Y376 341 aaPredicted RBP8.1□□□□□ -1.11
DDX55-208ENST00000541259 SNX5Q9Y5X3 404 aa8.1□□□□□ -1.11
DDX55-208ENST00000541259 LRRK2Q5S007 2527 aa8.1□□□□□ -1.11
DDX55-208ENST00000541259 DOPEY2Q9Y3R5 2298 aa8.1□□□□□ -1.11
DDX55-208ENST00000541259 IQCMA0A1B0GVH7 501 aa8.09□□□□□ -1.11
DDX55-208ENST00000541259 TMEM129A0AVI4 362 aa8.09□□□□□ -1.11
DDX55-208ENST00000541259 C5orf49A4QMS7 147 aa8.09□□□□□ -1.11
DDX55-208ENST00000541259 A6NHS1 94 aa8.09□□□□□ -1.11
DDX55-208ENST00000541259 TRIM64CA6NLI5 447 aa8.09□□□□□ -1.11
DDX55-208ENST00000541259 F5H5K5 113 aa8.09□□□□□ -1.11
DDX55-208ENST00000541259 M0R1B8 84 aa8.09□□□□□ -1.11
DDX55-208ENST00000541259 MYL12BO14950 172 aa8.09□□□□□ -1.11
DDX55-208ENST00000541259 MRPS14O60783 128 aaKnown RBP8.09□□□□□ -1.11
DDX55-208ENST00000541259 SRSF10O75494 262 aaKnown RBP8.09□□□□□ -1.11
DDX55-208ENST00000541259 SULT1C4O75897 302 aa8.09□□□□□ -1.11
DDX55-208ENST00000541259 INMTO95050 263 aa8.09□□□□□ -1.11
DDX55-208ENST00000541259 IGLV1-44P01699 117 aa8.09□□□□□ -1.11
DDX55-208ENST00000541259 KRT8P05787 483 aa8.09□□□□□ -1.11
DDX55-208ENST00000541259 CECR9P0C854 216 aa8.09□□□□□ -1.11
DDX55-208ENST00000541259 SLC2A1P11166 492 aa8.09□□□□□ -1.11
DDX55-208ENST00000541259 PPP3CBP16298 524 aa8.09□□□□□ -1.11
DDX55-208ENST00000541259 CCNOP22674 350 aa8.09□□□□□ -1.11
DDX55-208ENST00000541259 HSD11B1P28845 292 aa8.09□□□□□ -1.11
DDX55-208ENST00000541259 CALCRP30988 508 aa8.09□□□□□ -1.11
DDX55-208ENST00000541259 CX3CR1P49238 355 aa8.09□□□□□ -1.11
DDX55-208ENST00000541259 RIDAP52758 137 aaKnown RBP8.09□□□□□ -1.11
DDX55-208ENST00000541259 SORDQ00796 357 aa8.09□□□□□ -1.11
DDX55-208ENST00000541259 PLP2Q04941 152 aa8.09□□□□□ -1.11
DDX55-208ENST00000541259 MFGE8Q08431 387 aaPredicted RBP8.09□□□□□ -1.11
DDX55-208ENST00000541259 MED22Q15528 200 aa8.09□□□□□ -1.11
DDX55-208ENST00000541259 NEDD8Q15843 81 aa8.09□□□□□ -1.11
DDX55-208ENST00000541259 DEGS2Q6QHC5 323 aa8.09□□□□□ -1.11
DDX55-208ENST00000541259 TMPRSS11AQ6ZMR5 421 aa8.09□□□□□ -1.11
DDX55-208ENST00000541259 KCTD8Q6ZWB6 473 aa8.09□□□□□ -1.11
DDX55-208ENST00000541259 SYS1Q8N2H4 156 aa8.09□□□□□ -1.11
DDX55-208ENST00000541259 ZNF283Q8N7M2 679 aa8.09□□□□□ -1.11
DDX55-208ENST00000541259 ZFP41Q8N8Y5 198 aa8.09□□□□□ -1.11
DDX55-208ENST00000541259 SLC30A7Q8NEW0 376 aa8.09□□□□□ -1.11
DDX55-208ENST00000541259 OR52N1Q8NH53 320 aa8.09□□□□□ -1.11
DDX55-208ENST00000541259 SSC4DQ8WTU2 575 aa8.09□□□□□ -1.11
DDX55-208ENST00000541259 RORBQ92753 470 aa8.09□□□□□ -1.11
DDX55-208ENST00000541259 KCNJ15Q99712 375 aa8.09□□□□□ -1.11
DDX55-208ENST00000541259 MND1Q9BWT6 205 aa8.09□□□□□ -1.11
DDX55-208ENST00000541259 BABAM2Q9NXR7 383 aa8.09□□□□□ -1.11
DDX55-208ENST00000541259 N6AMT1Q9Y5N5 214 aa8.09□□□□□ -1.11
DDX55-208ENST00000541259 SIRT4Q9Y6E7 314 aaPredicted RBP8.09□□□□□ -1.11
DDX55-208ENST00000541259 DPRXA6NFQ7 191 aa8.08□□□□□ -1.12
DDX55-208ENST00000541259 TUBAL3A6NHL2 446 aa8.08□□□□□ -1.12
DDX55-208ENST00000541259 M0R135 149 aa8.08□□□□□ -1.12
DDX55-208ENST00000541259 ZNF254O75437 659 aa8.08□□□□□ -1.12
DDX55-208ENST00000541259 MT-ND5P03915 603 aa8.08□□□□□ -1.12
DDX55-208ENST00000541259 TACSTD2P09758 323 aa8.08□□□□□ -1.12
DDX55-208ENST00000541259 ACSM4P0C7M7 580 aa8.08□□□□□ -1.12
DDX55-208ENST00000541259 COX5BP10606 129 aa8.08□□□□□ -1.12
DDX55-208ENST00000541259 OTX1P32242 354 aaPredicted RBP8.08□□□□□ -1.12
DDX55-208ENST00000541259 APLNRP35414 380 aa8.08□□□□□ -1.12
DDX55-208ENST00000541259 WNT5AP41221 380 aa8.08□□□□□ -1.12
DDX55-208ENST00000541259 KIR3DL2P43630 455 aa8.08□□□□□ -1.12
DDX55-208ENST00000541259 GDI2P50395 445 aaKnown RBP8.08□□□□□ -1.12
DDX55-208ENST00000541259 TPTEP56180 551 aa8.08□□□□□ -1.12
DDX55-208ENST00000541259 WNT4P56705 351 aa8.08□□□□□ -1.12
DDX55-208ENST00000541259 ZNF121P58317 390 aaPredicted RBP8.08□□□□□ -1.12
DDX55-208ENST00000541259 NANOS3P60323 173 aaKnown RBP8.08□□□□□ -1.12
DDX55-208ENST00000541259 ACTA2P62736 377 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms