RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 SIAH3Q8IW03 269 aa10.76□□□□□ -0.69
AP003559.1-201ENST00000540906 SKA3Q8IX90 412 aa10.76□□□□□ -0.69
AP003559.1-201ENST00000540906 IZUMO1Q8IYV9 350 aa10.76□□□□□ -0.69
AP003559.1-201ENST00000540906 ZNF283Q8N7M2 679 aa10.76□□□□□ -0.69
AP003559.1-201ENST00000540906 OR1J2Q8NGS2 313 aa10.76□□□□□ -0.69
AP003559.1-201ENST00000540906 OR13C3Q8NGS6 347 aa10.76□□□□□ -0.69
AP003559.1-201ENST00000540906 ADAT3Q96EY9 351 aaPredicted RBP10.76□□□□□ -0.69
AP003559.1-201ENST00000540906 FOXB1Q99853 325 aa10.76□□□□□ -0.69
AP003559.1-201ENST00000540906 CCDC32Q9BV29 185 aa10.76□□□□□ -0.69
AP003559.1-201ENST00000540906 PRRG4Q9BZD6 226 aa10.76□□□□□ -0.69
AP003559.1-201ENST00000540906 SLCO5A1Q9H2Y9 848 aa10.76□□□□□ -0.69
AP003559.1-201ENST00000540906 ZNF224Q9NZL3 707 aa10.76□□□□□ -0.69
AP003559.1-201ENST00000540906 OR5V1Q9UGF6 321 aa10.76□□□□□ -0.69
AP003559.1-201ENST00000540906 HHLA2Q9UM44 414 aa10.76□□□□□ -0.69
AP003559.1-201ENST00000540906 MGAQ8IWI9 3026 aa10.75□□□□□ -0.69
AP003559.1-201ENST00000540906 LINC00854A0A1B0GVQ3 168 aa10.75□□□□□ -0.69
AP003559.1-201ENST00000540906 PDCD5O14737 125 aa10.75□□□□□ -0.69
AP003559.1-201ENST00000540906 SLC19A2O60779 497 aa10.75□□□□□ -0.69
AP003559.1-201ENST00000540906 RAF1P04049 648 aa10.75□□□□□ -0.69
AP003559.1-201ENST00000540906 ZNF32P17041 273 aa10.75□□□□□ -0.69
AP003559.1-201ENST00000540906 EIF2S3P41091 472 aaKnown RBP10.75□□□□□ -0.69
AP003559.1-201ENST00000540906 ARF1P84077 181 aaKnown RBP10.75□□□□□ -0.69
AP003559.1-201ENST00000540906 ELFN2Q5R3F8 820 aa10.75□□□□□ -0.69
AP003559.1-201ENST00000540906 ZNF704Q6ZNC4 412 aaPredicted RBP10.75□□□□□ -0.69
AP003559.1-201ENST00000540906 MED12LQ86YW9 2145 aa10.75□□□□□ -0.69
AP003559.1-201ENST00000540906 POC5Q8NA72 575 aa10.75□□□□□ -0.69
AP003559.1-201ENST00000540906 PLPP7Q8NBV4 271 aa10.75□□□□□ -0.69
AP003559.1-201ENST00000540906 GJC3Q8NFK1 279 aa10.75□□□□□ -0.69
AP003559.1-201ENST00000540906 AKR7LQ8NHP1 331 aa10.75□□□□□ -0.69
AP003559.1-201ENST00000540906 FGGYQ96C11 551 aa10.75□□□□□ -0.69
AP003559.1-201ENST00000540906 LYZL4Q96KX0 146 aa10.75□□□□□ -0.69
AP003559.1-201ENST00000540906 LUZP4Q9P127 313 aa10.75□□□□□ -0.69
AP003559.1-201ENST00000540906 ABRACLQ9P1F3 81 aa10.75□□□□□ -0.69
AP003559.1-201ENST00000540906 PRSS50Q9UI38 385 aa10.75□□□□□ -0.69
AP003559.1-201ENST00000540906 SSUH2Q9Y2M2 353 aa10.75□□□□□ -0.69
AP003559.1-201ENST00000540906 MSRB2Q9Y3D2 182 aa10.75□□□□□ -0.69
AP003559.1-201ENST00000540906 ZNF503-AS2A6NEH8 195 aa10.74□□□□□ -0.69
AP003559.1-201ENST00000540906 F5H5K5 113 aa10.74□□□□□ -0.69
AP003559.1-201ENST00000540906 LANCL1O43813 399 aa10.74□□□□□ -0.69
AP003559.1-201ENST00000540906 CST2P09228 141 aa10.74□□□□□ -0.69
AP003559.1-201ENST00000540906 CTSSP25774 331 aa10.74□□□□□ -0.69
AP003559.1-201ENST00000540906 SPOCK1Q08629 439 aa10.74□□□□□ -0.69
AP003559.1-201ENST00000540906 IL18Q14116 193 aa10.74□□□□□ -0.69
AP003559.1-201ENST00000540906 RIPPLY2Q5TAB7 128 aa10.74□□□□□ -0.69
AP003559.1-201ENST00000540906 GDPD3Q7L5L3 318 aa10.74□□□□□ -0.69
AP003559.1-201ENST00000540906 BIVMQ86UB2 503 aa10.74□□□□□ -0.69
AP003559.1-201ENST00000540906 LRRC28Q86X40 367 aaPredicted RBP10.74□□□□□ -0.69
AP003559.1-201ENST00000540906 SPACA3Q8IXA5 215 aa10.74□□□□□ -0.69
AP003559.1-201ENST00000540906 CMTM4Q8IZR5 234 aa10.74□□□□□ -0.69
AP003559.1-201ENST00000540906 SLC22A24Q8N4F4 322 aa10.74□□□□□ -0.69
AP003559.1-201ENST00000540906 RBMXL3Q8N7X1 1067 aaKnown RBP10.74□□□□□ -0.69
AP003559.1-201ENST00000540906 ABHD1Q96SE0 405 aa10.74□□□□□ -0.69
AP003559.1-201ENST00000540906 KCNJ15Q99712 375 aa10.74□□□□□ -0.69
AP003559.1-201ENST00000540906 WNT5BQ9H1J7 359 aa10.74□□□□□ -0.69
AP003559.1-201ENST00000540906 C12orf49Q9H741 205 aa10.74□□□□□ -0.69
AP003559.1-201ENST00000540906 LIN7BQ9HAP6 207 aa10.74□□□□□ -0.69
AP003559.1-201ENST00000540906 NOX3Q9HBY0 568 aa10.74□□□□□ -0.69
AP003559.1-201ENST00000540906 CGGBP1Q9UFW8 167 aaPredicted RBP10.74□□□□□ -0.69
AP003559.1-201ENST00000540906 SPATA2Q9UM82 520 aa10.74□□□□□ -0.69
AP003559.1-201ENST00000540906 RHBDD3Q9Y3P4 386 aa10.74□□□□□ -0.69
AP003559.1-201ENST00000540906 ZNF724A8MTY0 619 aa10.74□□□□□ -0.69
AP003559.1-201ENST00000540906 SYNGR3O43761 229 aa10.74□□□□□ -0.69
AP003559.1-201ENST00000540906 ANXA2P07355 339 aaKnown RBP10.74□□□□□ -0.69
AP003559.1-201ENST00000540906 YES1P07947 543 aa10.74□□□□□ -0.69
AP003559.1-201ENST00000540906 ITGA5P08648 1049 aa10.74□□□□□ -0.69
AP003559.1-201ENST00000540906 OCMP0CE72 109 aaPredicted RBP10.74□□□□□ -0.69
AP003559.1-201ENST00000540906 UBCP0CG48 685 aaKnown RBP10.74□□□□□ -0.69
AP003559.1-201ENST00000540906 TMIGD3P0DMS9 266 aaPredicted RBP10.74□□□□□ -0.69
AP003559.1-201ENST00000540906 FSTP19883 344 aa10.74□□□□□ -0.69
AP003559.1-201ENST00000540906 CRYGSP22914 178 aa10.74□□□□□ -0.69
AP003559.1-201ENST00000540906 OTX1P32242 354 aaPredicted RBP10.74□□□□□ -0.69
AP003559.1-201ENST00000540906 GUCA1AP43080 201 aaPredicted RBP10.74□□□□□ -0.69
AP003559.1-201ENST00000540906 PSG4Q00888 419 aa10.74□□□□□ -0.69
AP003559.1-201ENST00000540906 ZNF169Q14929 603 aaPredicted RBP10.74□□□□□ -0.69
AP003559.1-201ENST00000540906 TRIM16LQ309B1 348 aa10.74□□□□□ -0.69
AP003559.1-201ENST00000540906 GFOD2Q3B7J2 385 aa10.74□□□□□ -0.69
AP003559.1-201ENST00000540906 TMEM244Q5VVB8 128 aa10.74□□□□□ -0.69
AP003559.1-201ENST00000540906 ZNF544Q6NX49 715 aa10.74□□□□□ -0.69
AP003559.1-201ENST00000540906 ZNF813Q6ZN06 617 aa10.74□□□□□ -0.69
AP003559.1-201ENST00000540906 FGD2Q7Z6J4 655 aa10.74□□□□□ -0.69
AP003559.1-201ENST00000540906 ADGRE4PQ86SQ3 457 aa10.74□□□□□ -0.69
AP003559.1-201ENST00000540906 SERPINA12Q8IW75 414 aa10.74□□□□□ -0.69
AP003559.1-201ENST00000540906 OR5M9Q8NGP3 310 aa10.74□□□□□ -0.69
AP003559.1-201ENST00000540906 SNIP1Q8TAD8 396 aaKnown RBP10.74□□□□□ -0.69
AP003559.1-201ENST00000540906 ZNF671Q8TAW3 534 aa10.74□□□□□ -0.69
AP003559.1-201ENST00000540906 COX4I2Q96KJ9 171 aa10.74□□□□□ -0.69
AP003559.1-201ENST00000540906 LINC00470Q9BZP3 86 aa10.74□□□□□ -0.69
AP003559.1-201ENST00000540906 PRDM14Q9GZV8 571 aa10.74□□□□□ -0.69
AP003559.1-201ENST00000540906 SLITRK2Q9H156 845 aa10.74□□□□□ -0.69
AP003559.1-201ENST00000540906 GPR84Q9NQS5 396 aa10.74□□□□□ -0.69
AP003559.1-201ENST00000540906 ZNF275Q9NSD4 429 aaPredicted RBP10.74□□□□□ -0.69
AP003559.1-201ENST00000540906 PLEK2Q9NYT0 353 aa10.74□□□□□ -0.69
AP003559.1-201ENST00000540906 CLCF1Q9UBD9 225 aa10.74□□□□□ -0.69
AP003559.1-201ENST00000540906 A0A096LPE4 126 aa10.73□□□□□ -0.69
AP003559.1-201ENST00000540906 A0A1W2PPZ6 126 aa10.73□□□□□ -0.69
AP003559.1-201ENST00000540906 SLC22A20A6NK97 555 aa10.73□□□□□ -0.69
AP003559.1-201ENST00000540906 ANXA2P2A6NMY6 339 aa10.73□□□□□ -0.69
AP003559.1-201ENST00000540906 PLA2G10O15496 165 aa10.73□□□□□ -0.69
AP003559.1-201ENST00000540906 SYT7O43581 403 aa10.73□□□□□ -0.69
AP003559.1-201ENST00000540906 IGLV3-1P01715 115 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms