RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 PURGQ9UJV8 347 aaKnown RBP14.38□□□□□ -0.11
CD9-209ENST00000540891 PRR23D1E9PI22 279 aaPredicted RBP14.37□□□□□ -0.11
CD9-209ENST00000540891 SPRY3O43610 288 aa14.37□□□□□ -0.11
CD9-209ENST00000540891 TIMM8AO60220 97 aaPredicted RBP14.37□□□□□ -0.11
CD9-209ENST00000540891 ADH4P08319 380 aa14.37□□□□□ -0.11
CD9-209ENST00000540891 PRR23D2P0DMB1 279 aaPredicted RBP14.37□□□□□ -0.11
CD9-209ENST00000540891 OTX1P32242 354 aaPredicted RBP14.37□□□□□ -0.11
CD9-209ENST00000540891 MRPS11P82912 194 aaKnown RBP14.37□□□□□ -0.11
CD9-209ENST00000540891 HLXQ14774 488 aaPredicted RBP14.37□□□□□ -0.11
CD9-209ENST00000540891 PTGES3Q15185 160 aaKnown RBP14.37□□□□□ -0.11
CD9-209ENST00000540891 TRIP10Q15642 601 aa14.37□□□□□ -0.11
CD9-209ENST00000540891 TSTQ16762 297 aaKnown RBP14.37□□□□□ -0.11
CD9-209ENST00000540891 PCGF3Q3KNV8 242 aa14.37□□□□□ -0.11
CD9-209ENST00000540891 SPRNQ5BIV9 151 aa14.37□□□□□ -0.11
CD9-209ENST00000540891 FBXW12Q6X9E4 464 aa14.37□□□□□ -0.11
CD9-209ENST00000540891 Q6ZR03 302 aa14.37□□□□□ -0.11
CD9-209ENST00000540891 ZDHHC13Q8IUH4 622 aa14.37□□□□□ -0.11
CD9-209ENST00000540891 CPOQ8IVL8 374 aa14.37□□□□□ -0.11
CD9-209ENST00000540891 TIGD4Q8IY51 512 aa14.37□□□□□ -0.11
CD9-209ENST00000540891 BBS1Q8NFJ9 593 aa14.37□□□□□ -0.11
CD9-209ENST00000540891 CENPNQ96H22 339 aaPredicted RBP14.37□□□□□ -0.11
CD9-209ENST00000540891 CHODLQ9H9P2 273 aa14.37□□□□□ -0.11
CD9-209ENST00000540891 MSL2Q9HCI7 577 aa14.37□□□□□ -0.11
CD9-209ENST00000540891 CYSLTR2Q9NS75 346 aa14.37□□□□□ -0.11
CD9-209ENST00000540891 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.37□□□□□ -0.11
CD9-209ENST00000540891 CGGBP1Q9UFW8 167 aaPredicted RBP14.37□□□□□ -0.11
CD9-209ENST00000540891 TMEFF2Q9UIK5 374 aaPredicted RBP14.37□□□□□ -0.11
CD9-209ENST00000540891 FN1P02751 2386 aaKnown RBP14.37□□□□□ -0.11
CD9-209ENST00000540891 PLSCR5A0PG75 271 aa14.36□□□□□ -0.11
CD9-209ENST00000540891 CD5LO43866 347 aa14.36□□□□□ -0.11
CD9-209ENST00000540891 LILRA1O75019 489 aa14.36□□□□□ -0.11
CD9-209ENST00000540891 MT-ND5P03915 603 aa14.36□□□□□ -0.11
CD9-209ENST00000540891 TACSTD2P09758 323 aa14.36□□□□□ -0.11
CD9-209ENST00000540891 IGHV4-31P0DP07 118 aa14.36□□□□□ -0.11
CD9-209ENST00000540891 RAC2P15153 192 aa14.36□□□□□ -0.11
CD9-209ENST00000540891 PAICSP22234 425 aaKnown RBP14.36□□□□□ -0.11
CD9-209ENST00000540891 ACHEP22303 614 aa14.36□□□□□ -0.11
CD9-209ENST00000540891 SLC2A5P22732 501 aa14.36□□□□□ -0.11
CD9-209ENST00000540891 GSTT1P30711 240 aa14.36□□□□□ -0.11
CD9-209ENST00000540891 LIPAP38571 399 aa14.36□□□□□ -0.11
CD9-209ENST00000540891 ESRRGP62508 458 aa14.36□□□□□ -0.11
CD9-209ENST00000540891 ERI1Q8IV48 349 aaKnown RBP14.36□□□□□ -0.11
CD9-209ENST00000540891 ZNF540Q8NDQ6 660 aa14.36□□□□□ -0.11
CD9-209ENST00000540891 SLAMF6Q96DU3 332 aa14.36□□□□□ -0.11
CD9-209ENST00000540891 ZMYND19Q96E35 227 aaPredicted RBP14.36□□□□□ -0.11
CD9-209ENST00000540891 INTS14Q96SY0 518 aa14.36□□□□□ -0.11
CD9-209ENST00000540891 PKP2Q99959 881 aa14.36□□□□□ -0.11
CD9-209ENST00000540891 KRT84Q9NSB2 600 aa14.36□□□□□ -0.11
CD9-209ENST00000540891 ZNF275Q9NSD4 429 aaPredicted RBP14.36□□□□□ -0.11
CD9-209ENST00000540891 TVP23BQ9NYZ1 205 aa14.36□□□□□ -0.11
CD9-209ENST00000540891 OAZ3Q9UMX2 235 aa14.36□□□□□ -0.11
CD9-209ENST00000540891 YLPM1P49750 1951 aaKnown RBP14.36□□□□□ -0.11
CD9-209ENST00000540891 LRP5LA4QPB2 252 aa14.35□□□□□ -0.11
CD9-209ENST00000540891 C5orf63A6NC05 138 aa14.35□□□□□ -0.11
CD9-209ENST00000540891 INAFM1C9JVW0 142 aa14.35□□□□□ -0.11
CD9-209ENST00000540891 M0R135 149 aa14.35□□□□□ -0.11
CD9-209ENST00000540891 PRODHO43272 600 aa14.35□□□□□ -0.11
CD9-209ENST00000540891 PRKYO43930 277 aa14.35□□□□□ -0.11
CD9-209ENST00000540891 SELENOFO60613 162 aa14.35□□□□□ -0.11
CD9-209ENST00000540891 CDC14BO60729 498 aa14.35□□□□□ -0.11
CD9-209ENST00000540891 CD55P08174 381 aa14.35□□□□□ -0.11
CD9-209ENST00000540891 CRYBB2P43320 205 aa14.35□□□□□ -0.11
CD9-209ENST00000540891 PPP2R2BQ00005 443 aa14.35□□□□□ -0.11
CD9-209ENST00000540891 CDK5R2Q13319 367 aa14.35□□□□□ -0.11
CD9-209ENST00000540891 FAM209AQ5JX71 171 aa14.35□□□□□ -0.11
CD9-209ENST00000540891 USP51Q70EK9 711 aa14.35□□□□□ -0.11
CD9-209ENST00000540891 DPY19L4Q7Z388 723 aa14.35□□□□□ -0.11
CD9-209ENST00000540891 OR5L1Q8NGL2 311 aa14.35□□□□□ -0.11
CD9-209ENST00000540891 OR6N2Q8NGY6 317 aa14.35□□□□□ -0.11
CD9-209ENST00000540891 ZNF799Q96GE5 643 aa14.35□□□□□ -0.11
CD9-209ENST00000540891 AMELYQ99218 206 aa14.35□□□□□ -0.11
CD9-209ENST00000540891 CIB1Q99828 191 aa14.35□□□□□ -0.11
CD9-209ENST00000540891 CACNG2Q9Y698 323 aa14.35□□□□□ -0.11
CD9-209ENST00000540891 ABCA1O95477 2261 aa14.35□□□□□ -0.11
CD9-209ENST00000540891 TLN2Q9Y4G6 2542 aa14.35□□□□□ -0.11
CD9-209ENST00000540891 NF1P21359 2839 aa14.34□□□□□ -0.11
CD9-209ENST00000540891 SAC3D1A6NKF1 404 aa14.34□□□□□ -0.11
CD9-209ENST00000540891 ZAR1LA6NP61 321 aa14.34□□□□□ -0.11
CD9-209ENST00000540891 LCATP04180 440 aa14.34□□□□□ -0.11
CD9-209ENST00000540891 IL2RGP31785 369 aa14.34□□□□□ -0.11
CD9-209ENST00000540891 POLR2IP36954 125 aaKnown RBP14.34□□□□□ -0.11
CD9-209ENST00000540891 TPTEP56180 551 aa14.34□□□□□ -0.11
CD9-209ENST00000540891 PRSS12P56730 875 aa14.34□□□□□ -0.11
CD9-209ENST00000540891 EFNB1P98172 346 aa14.34□□□□□ -0.11
CD9-209ENST00000540891 HNRNPA0Q13151 305 aaKnown RBP14.34□□□□□ -0.11
CD9-209ENST00000540891 EIF2B1Q14232 305 aaKnown RBP14.34□□□□□ -0.11
CD9-209ENST00000540891 GK2Q14410 553 aaPredicted RBP14.34□□□□□ -0.11
CD9-209ENST00000540891 SNAPC1Q16533 368 aa14.34□□□□□ -0.11
CD9-209ENST00000540891 SNAI3Q3KNW1 292 aa14.34□□□□□ -0.11
CD9-209ENST00000540891 KLHL12Q53G59 568 aa14.34□□□□□ -0.11
CD9-209ENST00000540891 SLX4IPQ5VYV7 408 aa14.34□□□□□ -0.11
CD9-209ENST00000540891 C12orf73Q69YU5 71 aa14.34□□□□□ -0.11
CD9-209ENST00000540891 OR2T2Q6IF00 324 aa14.34□□□□□ -0.11
CD9-209ENST00000540891 SPATC1Q76KD6 591 aa14.34□□□□□ -0.11
CD9-209ENST00000540891 CXXC5Q7LFL8 322 aaKnown RBP14.34□□□□□ -0.11
CD9-209ENST00000540891 OR5AS1Q8N127 324 aa14.34□□□□□ -0.11
CD9-209ENST00000540891 SPTSSAQ969W0 71 aa14.34□□□□□ -0.11
CD9-209ENST00000540891 POM121Q96HA1 1249 aa14.34□□□□□ -0.11
CD9-209ENST00000540891 PLEKHA8Q96JA3 519 aa14.34□□□□□ -0.11
CD9-209ENST00000540891 KCNJ15Q99712 375 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms