RNA–Protein interactions for RNA: ENST00000540798.5

RTN3-210, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-210ENST00000540798 A0A1B0GTI1 187 aa12.2□□□□□ -0.46
RTN3-210ENST00000540798 LNP1A1A4G5 178 aa12.2□□□□□ -0.46
RTN3-210ENST00000540798 EIF1AYO14602 144 aaKnown RBP12.2□□□□□ -0.46
RTN3-210ENST00000540798 PEX14O75381 377 aa12.2□□□□□ -0.46
RTN3-210ENST00000540798 VAMP5O95183 116 aa12.2□□□□□ -0.46
RTN3-210ENST00000540798 QDPRP09417 244 aa12.2□□□□□ -0.46
RTN3-210ENST00000540798 CDAP32320 146 aa12.2□□□□□ -0.46
RTN3-210ENST00000540798 B2MP61769 119 aa12.2□□□□□ -0.46
RTN3-210ENST00000540798 RPS18P62269 152 aaKnown RBP12.2□□□□□ -0.46
RTN3-210ENST00000540798 KLHL24Q6TFL4 600 aa12.2□□□□□ -0.46
RTN3-210ENST00000540798 ZNF813Q6ZN06 617 aa12.2□□□□□ -0.46
RTN3-210ENST00000540798 CREB3L2Q70SY1 520 aa12.2□□□□□ -0.46
RTN3-210ENST00000540798 TAAR9Q96RI9 348 aa12.2□□□□□ -0.46
RTN3-210ENST00000540798 PMS2P1A4D2B8 440 aa12.2□□□□□ -0.46
RTN3-210ENST00000540798 DOK2O60496 412 aa12.2□□□□□ -0.46
RTN3-210ENST00000540798 PRAF2O60831 178 aa12.2□□□□□ -0.46
RTN3-210ENST00000540798 TGM6O95932 706 aa12.2□□□□□ -0.46
RTN3-210ENST00000540798 ALDOBP05062 364 aa12.2□□□□□ -0.46
RTN3-210ENST00000540798 SULT1A3P0DMM9 295 aa12.2□□□□□ -0.46
RTN3-210ENST00000540798 SULT1A4P0DMN0 295 aa12.2□□□□□ -0.46
RTN3-210ENST00000540798 OR3A3P47888 321 aa12.2□□□□□ -0.46
RTN3-210ENST00000540798 SUCLG1P53597 346 aaKnown RBP12.2□□□□□ -0.46
RTN3-210ENST00000540798 RAC1P63000 192 aa12.2□□□□□ -0.46
RTN3-210ENST00000540798 SSBP1Q04837 148 aaKnown RBP12.2□□□□□ -0.46
RTN3-210ENST00000540798 GLYATL3Q5SZD4 288 aa12.2□□□□□ -0.46
RTN3-210ENST00000540798 SFRP4Q6FHJ7 346 aaPredicted RBP12.2□□□□□ -0.46
RTN3-210ENST00000540798 FOXRED1Q96CU9 486 aaPredicted RBP12.2□□□□□ -0.46
RTN3-210ENST00000540798 SLA2Q9H6Q3 261 aa12.2□□□□□ -0.46
RTN3-210ENST00000540798 DKKL1Q9UK85 242 aa12.2□□□□□ -0.46
RTN3-210ENST00000540798 ZDBF2Q9HCK1 2354 aa12.2□□□□□ -0.46
RTN3-210ENST00000540798 ZNF726A6NNF4 738 aa12.2□□□□□ -0.46
RTN3-210ENST00000540798 KDM4BO94953 1096 aa12.2□□□□□ -0.46
RTN3-210ENST00000540798 CLDN6P56747 220 aa12.2□□□□□ -0.46
RTN3-210ENST00000540798 CLDN17P56750 224 aa12.2□□□□□ -0.46
RTN3-210ENST00000540798 GABREP78334 506 aa12.2□□□□□ -0.46
RTN3-210ENST00000540798 CDCP2Q5VXM1 449 aa12.2□□□□□ -0.46
RTN3-210ENST00000540798 CARD17Q5XLA6 110 aa12.2□□□□□ -0.46
RTN3-210ENST00000540798 TMEM123Q8N131 208 aa12.2□□□□□ -0.46
RTN3-210ENST00000540798 STRADBQ9C0K7 418 aa12.2□□□□□ -0.46
RTN3-210ENST00000540798 GLTPQ9NZD2 209 aa12.2□□□□□ -0.46
RTN3-210ENST00000540798 DNPH1O43598 174 aa12.19□□□□□ -0.46
RTN3-210ENST00000540798 NR2C1P13056 603 aa12.19□□□□□ -0.46
RTN3-210ENST00000540798 CTSSP25774 331 aa12.19□□□□□ -0.46
RTN3-210ENST00000540798 HSD11B1P28845 292 aa12.19□□□□□ -0.46
RTN3-210ENST00000540798 LSM6P62312 80 aaKnown RBP12.19□□□□□ -0.46
RTN3-210ENST00000540798 RAET1LQ5VY80 246 aa12.19□□□□□ -0.46
RTN3-210ENST00000540798 ADGRE4PQ86SQ3 457 aa12.19□□□□□ -0.46
RTN3-210ENST00000540798 OR2AJ1Q8NGZ0 328 aa12.19□□□□□ -0.46
RTN3-210ENST00000540798 ANGPTL6Q8NI99 470 aa12.19□□□□□ -0.46
RTN3-210ENST00000540798 LIN37Q96GY3 246 aaPredicted RBP12.19□□□□□ -0.46
RTN3-210ENST00000540798 MS4A3Q96HJ5 214 aa12.19□□□□□ -0.46
RTN3-210ENST00000540798 PIGQQ9BRB3 760 aa12.19□□□□□ -0.46
RTN3-210ENST00000540798 SEC61A2Q9H9S3 476 aa12.19□□□□□ -0.46
RTN3-210ENST00000540798 TAS2R8Q9NYW2 309 aa12.19□□□□□ -0.46
RTN3-210ENST00000540798 CGGBP1Q9UFW8 167 aaPredicted RBP12.19□□□□□ -0.46
RTN3-210ENST00000540798 A0A0A6YYH2 397 aa12.19□□□□□ -0.46
RTN3-210ENST00000540798 A0A1B0GUH1 482 aa12.19□□□□□ -0.46
RTN3-210ENST00000540798 A6NJ64 397 aa12.19□□□□□ -0.46
RTN3-210ENST00000540798 TLX3O43711 291 aaPredicted RBP12.19□□□□□ -0.46
RTN3-210ENST00000540798 CD59P13987 128 aa12.19□□□□□ -0.46
RTN3-210ENST00000540798 TCN2P20062 427 aa12.19□□□□□ -0.46
RTN3-210ENST00000540798 CCL1P22362 96 aa12.19□□□□□ -0.46
RTN3-210ENST00000540798 SRD5A2P31213 254 aa12.19□□□□□ -0.46
RTN3-210ENST00000540798 EIF1AXP47813 144 aaKnown RBP12.19□□□□□ -0.46
RTN3-210ENST00000540798 CSNK2A1P68400 391 aaPredicted RBP12.19□□□□□ -0.46
RTN3-210ENST00000540798 LAMTOR1Q6IAA8 161 aa12.19□□□□□ -0.46
RTN3-210ENST00000540798 RAB11FIP2Q7L804 512 aa12.19□□□□□ -0.46
RTN3-210ENST00000540798 OR1J2Q8NGS2 313 aa12.19□□□□□ -0.46
RTN3-210ENST00000540798 GPX8Q8TED1 209 aa12.19□□□□□ -0.46
RTN3-210ENST00000540798 FARSAQ9Y285 508 aaKnown RBP12.19□□□□□ -0.46
RTN3-210ENST00000540798 NPTNQ9Y639 398 aa12.19□□□□□ -0.46
RTN3-210ENST00000540798 SDK2Q58EX2 2172 aa12.18□□□□□ -0.46
RTN3-210ENST00000540798 A0A0G2JMM0 328 aa12.18□□□□□ -0.46
RTN3-210ENST00000540798 A0A1W2PPB8 328 aa12.18□□□□□ -0.46
RTN3-210ENST00000540798 A0A1W2PRS3 328 aa12.18□□□□□ -0.46
RTN3-210ENST00000540798 KIR3DP1A8MWS1 328 aa12.18□□□□□ -0.46
RTN3-210ENST00000540798 G3V3Y1 287 aa12.18□□□□□ -0.46
RTN3-210ENST00000540798 SULT1C2O00338 296 aa12.18□□□□□ -0.46
RTN3-210ENST00000540798 RBBP9O75884 186 aa12.18□□□□□ -0.46
RTN3-210ENST00000540798 NDUFB6O95139 128 aa12.18□□□□□ -0.46
RTN3-210ENST00000540798 CSF1P09603 554 aa12.18□□□□□ -0.46
RTN3-210ENST00000540798 RAB6AP20340 208 aa12.18□□□□□ -0.46
RTN3-210ENST00000540798 CAPZA1P52907 286 aa12.18□□□□□ -0.46
RTN3-210ENST00000540798 SPOCK1Q08629 439 aa12.18□□□□□ -0.46
RTN3-210ENST00000540798 PHYHD1Q5SRE7 291 aa12.18□□□□□ -0.46
RTN3-210ENST00000540798 OR9K2Q8NGE7 335 aa12.18□□□□□ -0.46
RTN3-210ENST00000540798 FGGYQ96C11 551 aa12.18□□□□□ -0.46
RTN3-210ENST00000540798 ADAT3Q96EY9 351 aaPredicted RBP12.18□□□□□ -0.46
RTN3-210ENST00000540798 NAA11Q9BSU3 229 aaPredicted RBP12.18□□□□□ -0.46
RTN3-210ENST00000540798 ASH2LQ9UBL3 628 aa12.18□□□□□ -0.46
RTN3-210ENST00000540798 FOXD3Q9UJU5 478 aaPredicted RBP12.18□□□□□ -0.46
RTN3-210ENST00000540798 FLVCR2Q9UPI3 526 aa12.18□□□□□ -0.46
RTN3-210ENST00000540798 MEIKINA0A087WXM9 373 aa12.18□□□□□ -0.46
RTN3-210ENST00000540798 A0A0J9YW62 118 aa12.18□□□□□ -0.46
RTN3-210ENST00000540798 C9orf172C9J069 976 aa12.18□□□□□ -0.46
RTN3-210ENST00000540798 SERPINA7P05543 415 aa12.18□□□□□ -0.46
RTN3-210ENST00000540798 OTX2P32243 289 aa12.18□□□□□ -0.46
RTN3-210ENST00000540798 HIST1H3AP68431 136 aa12.18□□□□□ -0.46
RTN3-210ENST00000540798 LINC00303Q3SY05 128 aa12.18□□□□□ -0.46
RTN3-210ENST00000540798 HIST2H3PS2Q5TEC6 136 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms