RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 IQCF6A8MYZ5 107 aa11.83□□□□□ -0.52
SNHG1-213ENST00000540725 F5H5P2 479 aa11.83□□□□□ -0.52
SNHG1-213ENST00000540725 DCTN6O00399 190 aa11.83□□□□□ -0.52
SNHG1-213ENST00000540725 TMPRSS2O15393 492 aa11.83□□□□□ -0.52
SNHG1-213ENST00000540725 MLNRO43193 412 aa11.83□□□□□ -0.52
SNHG1-213ENST00000540725 CCDC22O60826 627 aa11.83□□□□□ -0.52
SNHG1-213ENST00000540725 DIRAS1O95057 198 aa11.83□□□□□ -0.52
SNHG1-213ENST00000540725 PPP1R3DO95685 299 aa11.83□□□□□ -0.52
SNHG1-213ENST00000540725 IGHV4-38-2P0DP08 117 aa11.83□□□□□ -0.52
SNHG1-213ENST00000540725 CPT2P23786 658 aa11.83□□□□□ -0.52
SNHG1-213ENST00000540725 PAX2Q02962 417 aa11.83□□□□□ -0.52
SNHG1-213ENST00000540725 CORO6Q6QEF8 472 aa11.83□□□□□ -0.52
SNHG1-213ENST00000540725 SMARCD3Q6STE5 483 aa11.83□□□□□ -0.52
SNHG1-213ENST00000540725 SHISA2Q6UWI4 295 aa11.83□□□□□ -0.52
SNHG1-213ENST00000540725 MOGAT3Q86VF5 341 aa11.83□□□□□ -0.52
SNHG1-213ENST00000540725 KLBQ86Z14 1044 aa11.83□□□□□ -0.52
SNHG1-213ENST00000540725 PARP8Q8N3A8 854 aa11.83□□□□□ -0.52
SNHG1-213ENST00000540725 OR52E2Q8NGJ4 325 aa11.83□□□□□ -0.52
SNHG1-213ENST00000540725 C7orf34Q96L11 122 aa11.83□□□□□ -0.52
SNHG1-213ENST00000540725 SLC30A2Q9BRI3 323 aa11.83□□□□□ -0.52
SNHG1-213ENST00000540725 WDR76Q9H967 626 aa11.83□□□□□ -0.52
SNHG1-213ENST00000540725 ABCD2Q9UBJ2 740 aa11.83□□□□□ -0.52
SNHG1-213ENST00000540725 MIOXQ9UGB7 285 aa11.83□□□□□ -0.52
SNHG1-213ENST00000540725 IGHV3OR16-10A0A075B7F0 116 aa11.82□□□□□ -0.52
SNHG1-213ENST00000540725 RNASE1P07998 156 aaKnown RBP11.82□□□□□ -0.52
SNHG1-213ENST00000540725 PPIAL4GP0DN37 164 aa11.82□□□□□ -0.52
SNHG1-213ENST00000540725 PSME3P61289 254 aa11.82□□□□□ -0.52
SNHG1-213ENST00000540725 GNB2P62879 340 aa11.82□□□□□ -0.52
SNHG1-213ENST00000540725 COX10Q12887 443 aa11.82□□□□□ -0.52
SNHG1-213ENST00000540725 ZNF181Q2M3W8 571 aa11.82□□□□□ -0.52
SNHG1-213ENST00000540725 RSPO1Q2MKA7 263 aaPredicted RBP11.82□□□□□ -0.52
SNHG1-213ENST00000540725 PRR31Q5SQ13 230 aa11.82□□□□□ -0.52
SNHG1-213ENST00000540725 BTNL3Q6UXE8 466 aa11.82□□□□□ -0.52
SNHG1-213ENST00000540725 LRRN1Q6UXK5 716 aa11.82□□□□□ -0.52
SNHG1-213ENST00000540725 FAM86B1Q8N7N1 296 aa11.82□□□□□ -0.52
SNHG1-213ENST00000540725 OR52J3Q8NH60 311 aa11.82□□□□□ -0.52
SNHG1-213ENST00000540725 FANK1Q8TC84 345 aa11.82□□□□□ -0.52
SNHG1-213ENST00000540725 NEIL1Q96FI4 390 aaPredicted RBP11.82□□□□□ -0.52
SNHG1-213ENST00000540725 PLEKHA8Q96JA3 519 aa11.82□□□□□ -0.52
SNHG1-213ENST00000540725 DHRS1Q96LJ7 313 aa11.82□□□□□ -0.52
SNHG1-213ENST00000540725 ERMAPQ96PL5 475 aaPredicted RBP11.82□□□□□ -0.52
SNHG1-213ENST00000540725 TMEM246Q9BRR3 403 aa11.82□□□□□ -0.52
SNHG1-213ENST00000540725 FUZQ9BT04 418 aa11.82□□□□□ -0.52
SNHG1-213ENST00000540725 HCAR1Q9BXC0 346 aa11.82□□□□□ -0.52
SNHG1-213ENST00000540725 B9D1Q9UPM9 204 aa11.82□□□□□ -0.52
SNHG1-213ENST00000540725 TGP01266 2768 aa11.82□□□□□ -0.52
SNHG1-213ENST00000540725 NOTCH1P46531 2555 aa11.81□□□□□ -0.52
SNHG1-213ENST00000540725 IGHV2-70DA0A0C4DH43 119 aa11.81□□□□□ -0.52
SNHG1-213ENST00000540725 LRRC30A6NM36 301 aa11.81□□□□□ -0.52
SNHG1-213ENST00000540725 PRSS12P56730 875 aa11.81□□□□□ -0.52
SNHG1-213ENST00000540725 DBPQ10586 325 aaPredicted RBP11.81□□□□□ -0.52
SNHG1-213ENST00000540725 KRT72Q14CN4 511 aa11.81□□□□□ -0.52
SNHG1-213ENST00000540725 ZNF404Q494X3 552 aa11.81□□□□□ -0.52
SNHG1-213ENST00000540725 FAM201AQ5SY85 155 aa11.81□□□□□ -0.52
SNHG1-213ENST00000540725 GLYATQ6IB77 296 aa11.81□□□□□ -0.52
SNHG1-213ENST00000540725 LEG1Q6P5S2 330 aa11.81□□□□□ -0.52
SNHG1-213ENST00000540725 COLCA1Q6ZS62 124 aa11.81□□□□□ -0.52
SNHG1-213ENST00000540725 C9orf139Q6ZV77 190 aa11.81□□□□□ -0.52
SNHG1-213ENST00000540725 JAZF1Q86VZ6 243 aa11.81□□□□□ -0.52
SNHG1-213ENST00000540725 LINC00346Q8IVM7 164 aa11.81□□□□□ -0.52
SNHG1-213ENST00000540725 C1orf87Q8N0U7 546 aa11.81□□□□□ -0.52
SNHG1-213ENST00000540725 OR6V1Q8N148 313 aa11.81□□□□□ -0.52
SNHG1-213ENST00000540725 SLC26A10Q8NG04 563 aa11.81□□□□□ -0.52
SNHG1-213ENST00000540725 OR8B3Q8NGG8 313 aa11.81□□□□□ -0.52
SNHG1-213ENST00000540725 RAB40AQ8WXH6 277 aa11.81□□□□□ -0.52
SNHG1-213ENST00000540725 SLC25A28Q96A46 364 aa11.81□□□□□ -0.52
SNHG1-213ENST00000540725 DACT3Q96B18 629 aaPredicted RBP11.81□□□□□ -0.52
SNHG1-213ENST00000540725 UPRTQ96BW1 309 aa11.81□□□□□ -0.52
SNHG1-213ENST00000540725 OR8B2Q96RD0 313 aa11.81□□□□□ -0.52
SNHG1-213ENST00000540725 NMNAT3Q96T66 252 aa11.81□□□□□ -0.52
SNHG1-213ENST00000540725 SRA1Q9HD15 236 aaKnown RBP11.81□□□□□ -0.52
SNHG1-213ENST00000540725 DCAF13Q9NV06 445 aaKnown RBP11.81□□□□□ -0.52
SNHG1-213ENST00000540725 TMEM100Q9NV29 134 aa11.81□□□□□ -0.52
SNHG1-213ENST00000540725 SAMD4AQ9UPU9 718 aaKnown RBP11.81□□□□□ -0.52
SNHG1-213ENST00000540725 TRAV40A0A0B4J280 105 aa11.8□□□□□ -0.52
SNHG1-213ENST00000540725 A0A1B0GWJ7 208 aa11.8□□□□□ -0.52
SNHG1-213ENST00000540725 CLDN34H7C241 214 aa11.8□□□□□ -0.52
SNHG1-213ENST00000540725 ARPC3O15145 178 aa11.8□□□□□ -0.52
SNHG1-213ENST00000540725 FSTL3O95633 263 aa11.8□□□□□ -0.52
SNHG1-213ENST00000540725 PLATP00750 562 aa11.8□□□□□ -0.52
SNHG1-213ENST00000540725 RENP00797 406 aa11.8□□□□□ -0.52
SNHG1-213ENST00000540725 HLA-DPB1P04440 258 aa11.8□□□□□ -0.52
SNHG1-213ENST00000540725 ACSM4P0C7M7 580 aa11.8□□□□□ -0.52
SNHG1-213ENST00000540725 SELEP16581 610 aa11.8□□□□□ -0.52
SNHG1-213ENST00000540725 FPR3P25089 353 aa11.8□□□□□ -0.52
SNHG1-213ENST00000540725 SLC6A6P31641 620 aa11.8□□□□□ -0.52
SNHG1-213ENST00000540725 MDH1P40925 334 aaKnown RBP11.8□□□□□ -0.52
SNHG1-213ENST00000540725 PMELP40967 661 aa11.8□□□□□ -0.52
SNHG1-213ENST00000540725 MTNR1AP48039 350 aa11.8□□□□□ -0.52
SNHG1-213ENST00000540725 PITPNBP48739 271 aa11.8□□□□□ -0.52
SNHG1-213ENST00000540725 SLC9A3R2Q15599 337 aa11.8□□□□□ -0.52
SNHG1-213ENST00000540725 KRTAP27-1Q3LI81 207 aa11.8□□□□□ -0.52
SNHG1-213ENST00000540725 SLC18B1Q6NT16 456 aa11.8□□□□□ -0.52
SNHG1-213ENST00000540725 CFAP77Q6ZQR2 320 aa11.8□□□□□ -0.52
SNHG1-213ENST00000540725 NLRC3Q7RTR2 1065 aa11.8□□□□□ -0.52
SNHG1-213ENST00000540725 PITX2Q99697 317 aa11.8□□□□□ -0.52
SNHG1-213ENST00000540725 OR52D1Q9H346 318 aa11.8□□□□□ -0.52
SNHG1-213ENST00000540725 ZNF696Q9H7X3 374 aa11.8□□□□□ -0.52
SNHG1-213ENST00000540725 UNKLQ9H9P5 680 aaKnown RBP11.8□□□□□ -0.52
SNHG1-213ENST00000540725 RPRD1BQ9NQG5 326 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms