RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 GPR35Q9HC97 309 aa9.25□□□□□ -0.93
ATL3-204ENST00000540699 SLCO1C1Q9NYB5 712 aa9.25□□□□□ -0.93
ATL3-204ENST00000540699 CRIM1Q9NZV1 1036 aa9.25□□□□□ -0.93
ATL3-204ENST00000540699 UPB1Q9UBR1 384 aa9.25□□□□□ -0.93
ATL3-204ENST00000540699 NDRG3Q9UGV2 375 aa9.25□□□□□ -0.93
ATL3-204ENST00000540699 LHFPL6Q9Y693 200 aa9.25□□□□□ -0.93
ATL3-204ENST00000540699 ZNF469Q96JG9 3925 aaPredicted RBP9.25□□□□□ -0.93
ATL3-204ENST00000540699 AKAP6Q13023 2319 aa9.25□□□□□ -0.93
ATL3-204ENST00000540699 LOC100506127A0A0U1RQW1 187 aa9.24□□□□□ -0.93
ATL3-204ENST00000540699 TRDV1A0A1B0GX56 115 aa9.24□□□□□ -0.93
ATL3-204ENST00000540699 FAM221AA4D161 298 aa9.24□□□□□ -0.93
ATL3-204ENST00000540699 PSMD9O00233 223 aa9.24□□□□□ -0.93
ATL3-204ENST00000540699 SC5DO75845 299 aa9.24□□□□□ -0.93
ATL3-204ENST00000540699 LYZL6O75951 148 aa9.24□□□□□ -0.93
ATL3-204ENST00000540699 GOSR1O95249 250 aa9.24□□□□□ -0.93
ATL3-204ENST00000540699 KRT8P05787 483 aa9.24□□□□□ -0.93
ATL3-204ENST00000540699 THBDP07204 575 aa9.24□□□□□ -0.93
ATL3-204ENST00000540699 EPXP11678 715 aa9.24□□□□□ -0.93
ATL3-204ENST00000540699 ZNF182P17025 639 aaPredicted RBP9.24□□□□□ -0.93
ATL3-204ENST00000540699 CRYGSP22914 178 aa9.24□□□□□ -0.93
ATL3-204ENST00000540699 IL32P24001 234 aa9.24□□□□□ -0.93
ATL3-204ENST00000540699 SSTR2P30874 369 aa9.24□□□□□ -0.93
ATL3-204ENST00000540699 FGF9P31371 208 aaPredicted RBP9.24□□□□□ -0.93
ATL3-204ENST00000540699 PSMB10P40306 273 aa9.24□□□□□ -0.93
ATL3-204ENST00000540699 NANOS3P60323 173 aaKnown RBP9.24□□□□□ -0.93
ATL3-204ENST00000540699 LSM6P62312 80 aaKnown RBP9.24□□□□□ -0.93
ATL3-204ENST00000540699 MRPS34P82930 218 aaKnown RBP9.24□□□□□ -0.93
ATL3-204ENST00000540699 FABP5Q01469 135 aa9.24□□□□□ -0.93
ATL3-204ENST00000540699 ROR2Q01974 943 aaKnown RBP9.24□□□□□ -0.93
ATL3-204ENST00000540699 TGFBR3Q03167 851 aa9.24□□□□□ -0.93
ATL3-204ENST00000540699 SNTB1Q13884 538 aaKnown RBP9.24□□□□□ -0.93
ATL3-204ENST00000540699 ENDOGQ14249 297 aaKnown RBP9.24□□□□□ -0.93
ATL3-204ENST00000540699 TSC22D1Q15714 1073 aa9.24□□□□□ -0.93
ATL3-204ENST00000540699 GABRA6Q16445 453 aa9.24□□□□□ -0.93
ATL3-204ENST00000540699 TIMM23BQ5SRD1 257 aa9.24□□□□□ -0.93
ATL3-204ENST00000540699 LIPNQ5VXI9 398 aa9.24□□□□□ -0.93
ATL3-204ENST00000540699 OR7E24Q6IFN5 339 aa9.24□□□□□ -0.93
ATL3-204ENST00000540699 FDX2Q6P4F2 183 aa9.24□□□□□ -0.93
ATL3-204ENST00000540699 RPL22L1Q6P5R6 122 aaKnown RBP9.24□□□□□ -0.93
ATL3-204ENST00000540699 KCTD18Q6PI47 426 aaPredicted RBP9.24□□□□□ -0.93
ATL3-204ENST00000540699 DEGS2Q6QHC5 323 aa9.24□□□□□ -0.93
ATL3-204ENST00000540699 ARL9Q6T311 187 aa9.24□□□□□ -0.93
ATL3-204ENST00000540699 SEZ6L2Q6UXD5 910 aa9.24□□□□□ -0.93
ATL3-204ENST00000540699 TMEM91Q6ZNR0 172 aa9.24□□□□□ -0.93
ATL3-204ENST00000540699 SSX8Q7RTT4 187 aa9.24□□□□□ -0.93
ATL3-204ENST00000540699 FAM220AQ7Z4H9 259 aa9.24□□□□□ -0.93
ATL3-204ENST00000540699 DCXRQ7Z4W1 244 aa9.24□□□□□ -0.93
ATL3-204ENST00000540699 LINC00346Q8IVM7 164 aa9.24□□□□□ -0.93
ATL3-204ENST00000540699 ZNF679Q8IYX0 411 aa9.24□□□□□ -0.93
ATL3-204ENST00000540699 GPR137CQ8N3F9 429 aa9.24□□□□□ -0.93
ATL3-204ENST00000540699 C17orf78Q8N4C9 275 aa9.24□□□□□ -0.93
ATL3-204ENST00000540699 OR10H5Q8NGA6 315 aa9.24□□□□□ -0.93
ATL3-204ENST00000540699 OR10S1Q8NGN2 331 aa9.24□□□□□ -0.93
ATL3-204ENST00000540699 LINC01560Q8TB33 94 aa9.24□□□□□ -0.93
ATL3-204ENST00000540699 THEM6Q8WUY1 208 aa9.24□□□□□ -0.93
ATL3-204ENST00000540699 RNF133Q8WVZ7 376 aa9.24□□□□□ -0.93
ATL3-204ENST00000540699 S100PBPQ96BU1 408 aa9.24□□□□□ -0.93
ATL3-204ENST00000540699 SMIM19Q96E16 107 aa9.24□□□□□ -0.93
ATL3-204ENST00000540699 ZNF837Q96EG3 531 aaPredicted RBP9.24□□□□□ -0.93
ATL3-204ENST00000540699 C14orf79Q96F83 325 aa9.24□□□□□ -0.93
ATL3-204ENST00000540699 MAP6Q96JE9 813 aa9.24□□□□□ -0.93
ATL3-204ENST00000540699 DCLRE1CQ96SD1 692 aaKnown RBP9.24□□□□□ -0.93
ATL3-204ENST00000540699 COQ7Q99807 217 aa9.24□□□□□ -0.93
ATL3-204ENST00000540699 DCUN1D5Q9BTE7 237 aa9.24□□□□□ -0.93
ATL3-204ENST00000540699 NELFAQ9H3P2 528 aa9.24□□□□□ -0.93
ATL3-204ENST00000540699 ELOVL3Q9HB03 270 aa9.24□□□□□ -0.93
ATL3-204ENST00000540699 EMC7Q9NPA0 242 aa9.24□□□□□ -0.93
ATL3-204ENST00000540699 TXNL4BQ9NX01 149 aaKnown RBP9.24□□□□□ -0.93
ATL3-204ENST00000540699 GDF2Q9UK05 429 aaPredicted RBP9.24□□□□□ -0.93
ATL3-204ENST00000540699 OR5H1A6NKK0 313 aa9.23□□□□□ -0.93
ATL3-204ENST00000540699 GABRPO00591 440 aa9.23□□□□□ -0.93
ATL3-204ENST00000540699 SRSF10O75494 262 aaKnown RBP9.23□□□□□ -0.93
ATL3-204ENST00000540699 HLA-DPB1P04440 258 aa9.23□□□□□ -0.93
ATL3-204ENST00000540699 TACSTD2P09758 323 aa9.23□□□□□ -0.93
ATL3-204ENST00000540699 MSR1P21757 451 aa9.23□□□□□ -0.93
ATL3-204ENST00000540699 OPRL1P41146 370 aa9.23□□□□□ -0.93
ATL3-204ENST00000540699 ZNF84P51523 738 aa9.23□□□□□ -0.93
ATL3-204ENST00000540699 HIST1H3AP68431 136 aa9.23□□□□□ -0.93
ATL3-204ENST00000540699 LSAMPQ13449 338 aa9.23□□□□□ -0.93
ATL3-204ENST00000540699 TRAM1Q15629 374 aa9.23□□□□□ -0.93
ATL3-204ENST00000540699 TAB1Q15750 504 aa9.23□□□□□ -0.93
ATL3-204ENST00000540699 HIST2H3PS2Q5TEC6 136 aa9.23□□□□□ -0.93
ATL3-204ENST00000540699 CORO6Q6QEF8 472 aa9.23□□□□□ -0.93
ATL3-204ENST00000540699 LRRN1Q6UXK5 716 aa9.23□□□□□ -0.93
ATL3-204ENST00000540699 USP43Q70EL4 1123 aa9.23□□□□□ -0.93
ATL3-204ENST00000540699 HIST2H3AQ71DI3 136 aa9.23□□□□□ -0.93
ATL3-204ENST00000540699 YIPF7Q8N8F6 280 aa9.23□□□□□ -0.93
ATL3-204ENST00000540699 OR1K1Q8NGR3 316 aa9.23□□□□□ -0.93
ATL3-204ENST00000540699 HSD17B8Q92506 261 aa9.23□□□□□ -0.93
ATL3-204ENST00000540699 HTRA1Q92743 480 aa9.23□□□□□ -0.93
ATL3-204ENST00000540699 BCL2L2Q92843 193 aaPredicted RBP9.23□□□□□ -0.93
ATL3-204ENST00000540699 TMEM203Q969S6 136 aa9.23□□□□□ -0.93
ATL3-204ENST00000540699 MED18Q9BUE0 208 aa9.23□□□□□ -0.93
ATL3-204ENST00000540699 TMED9Q9BVK6 235 aa9.23□□□□□ -0.93
ATL3-204ENST00000540699 ZNF416Q9BWM5 594 aa9.23□□□□□ -0.93
ATL3-204ENST00000540699 DCSTAMPQ9H295 470 aa9.23□□□□□ -0.93
ATL3-204ENST00000540699 C1orf198Q9H425 327 aa9.23□□□□□ -0.93
ATL3-204ENST00000540699 SEC61A2Q9H9S3 476 aa9.23□□□□□ -0.93
ATL3-204ENST00000540699 CRLF2Q9HC73 371 aa9.23□□□□□ -0.93
ATL3-204ENST00000540699 PNRC2Q9NPJ4 139 aaKnown RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms