RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 DNM1P34Q6PK57 102 aa10.02□□□□□ -0.81
CBX3P4-202ENST00000540428 DPY19L2P2Q6ZN68 376 aa10.02□□□□□ -0.81
CBX3P4-202ENST00000540428 DCDC5Q6ZRR9 648 aa10.02□□□□□ -0.81
CBX3P4-202ENST00000540428 COLCA1Q6ZS62 124 aa10.02□□□□□ -0.81
CBX3P4-202ENST00000540428 SPATC1Q76KD6 591 aa10.02□□□□□ -0.81
CBX3P4-202ENST00000540428 HDXQ7Z353 690 aa10.02□□□□□ -0.81
CBX3P4-202ENST00000540428 MOGAT3Q86VF5 341 aa10.02□□□□□ -0.81
CBX3P4-202ENST00000540428 SLC15A3Q8IY34 581 aa10.02□□□□□ -0.81
CBX3P4-202ENST00000540428 FITM2Q8N6M3 262 aa10.02□□□□□ -0.81
CBX3P4-202ENST00000540428 OR10S1Q8NGN2 331 aa10.02□□□□□ -0.81
CBX3P4-202ENST00000540428 SLC7A13Q8TCU3 470 aa10.02□□□□□ -0.81
CBX3P4-202ENST00000540428 FAM46AQ96IP4 442 aaKnown RBP10.02□□□□□ -0.81
CBX3P4-202ENST00000540428 HSH2DQ96JZ2 352 aa10.02□□□□□ -0.81
CBX3P4-202ENST00000540428 NUDT16L1Q9BRJ7 211 aaKnown RBP10.02□□□□□ -0.81
CBX3P4-202ENST00000540428 HCAR1Q9BXC0 346 aa10.02□□□□□ -0.81
CBX3P4-202ENST00000540428 RERGLQ9H628 205 aa10.02□□□□□ -0.81
CBX3P4-202ENST00000540428 NOX4Q9NPH5 578 aa10.02□□□□□ -0.81
CBX3P4-202ENST00000540428 TMEM100Q9NV29 134 aa10.02□□□□□ -0.81
CBX3P4-202ENST00000540428 CLN8Q9UBY8 286 aa10.02□□□□□ -0.81
CBX3P4-202ENST00000540428 ENPP4Q9Y6X5 453 aa10.02□□□□□ -0.81
CBX3P4-202ENST00000540428 SRRM5B3KS81 715 aa10.01□□□□□ -0.81
CBX3P4-202ENST00000540428 F5H5P2 479 aa10.01□□□□□ -0.81
CBX3P4-202ENST00000540428 H0YL77 283 aa10.01□□□□□ -0.81
CBX3P4-202ENST00000540428 SOCS2O14508 198 aa10.01□□□□□ -0.81
CBX3P4-202ENST00000540428 GSTA4O15217 222 aa10.01□□□□□ -0.81
CBX3P4-202ENST00000540428 HOXA3O43365 443 aaPredicted RBP10.01□□□□□ -0.81
CBX3P4-202ENST00000540428 ENSAO43768 121 aaKnown RBP10.01□□□□□ -0.81
CBX3P4-202ENST00000540428 SERPINA1P01009 418 aa10.01□□□□□ -0.81
CBX3P4-202ENST00000540428 H1F0P07305 194 aaKnown RBP10.01□□□□□ -0.81
CBX3P4-202ENST00000540428 FPR3P25089 353 aa10.01□□□□□ -0.81
CBX3P4-202ENST00000540428 PSMB10P40306 273 aa10.01□□□□□ -0.81
CBX3P4-202ENST00000540428 PMELP40967 661 aa10.01□□□□□ -0.81
CBX3P4-202ENST00000540428 CD200P41217 278 aa10.01□□□□□ -0.81
CBX3P4-202ENST00000540428 NPY4RP50391 375 aa10.01□□□□□ -0.81
CBX3P4-202ENST00000540428 LIPEQ05469 1076 aa10.01□□□□□ -0.81
CBX3P4-202ENST00000540428 DEFB112Q30KQ8 113 aa10.01□□□□□ -0.81
CBX3P4-202ENST00000540428 KRTAP27-1Q3LI81 207 aa10.01□□□□□ -0.81
CBX3P4-202ENST00000540428 GPR157Q5UAW9 335 aa10.01□□□□□ -0.81
CBX3P4-202ENST00000540428 OTPQ5XKR4 325 aa10.01□□□□□ -0.81
CBX3P4-202ENST00000540428 WDR25Q64LD2 544 aaPredicted RBP10.01□□□□□ -0.81
CBX3P4-202ENST00000540428 PTCHD4Q6ZW05 846 aa10.01□□□□□ -0.81
CBX3P4-202ENST00000540428 JAZF1Q86VZ6 243 aa10.01□□□□□ -0.81
CBX3P4-202ENST00000540428 TMEM86BQ8N661 226 aa10.01□□□□□ -0.81
CBX3P4-202ENST00000540428 OR11L1Q8NGX0 322 aa10.01□□□□□ -0.81
CBX3P4-202ENST00000540428 OR4F5Q8NH21 305 aa10.01□□□□□ -0.81
CBX3P4-202ENST00000540428 RP9Q8TA86 221 aaKnown RBP10.01□□□□□ -0.81
CBX3P4-202ENST00000540428 ZDHHC16Q969W1 377 aa10.01□□□□□ -0.81
CBX3P4-202ENST00000540428 RCN3Q96D15 328 aa10.01□□□□□ -0.81
CBX3P4-202ENST00000540428 RSRC1Q96IZ7 334 aaKnown RBP10.01□□□□□ -0.81
CBX3P4-202ENST00000540428 HOPXQ9BPY8 73 aaPredicted RBP10.01□□□□□ -0.81
CBX3P4-202ENST00000540428 BEX1Q9HBH7 125 aa10.01□□□□□ -0.81
CBX3P4-202ENST00000540428 KRCC1Q9NPI7 259 aaPredicted RBP10.01□□□□□ -0.81
CBX3P4-202ENST00000540428 NOP16Q9Y3C1 178 aaKnown RBP10.01□□□□□ -0.81
CBX3P4-202ENST00000540428 IER3IP1Q9Y5U9 82 aa10.01□□□□□ -0.81
CBX3P4-202ENST00000540428 SOX21Q9Y651 276 aaPredicted RBP10.01□□□□□ -0.81
CBX3P4-202ENST00000540428 LHFPL6Q9Y693 200 aa10.01□□□□□ -0.81
CBX3P4-202ENST00000540428 PKD1L1Q8TDX9 2849 aa10□□□□□ -0.81
CBX3P4-202ENST00000540428 MDFIC2A0A1B0GVS7 189 aa10□□□□□ -0.81
CBX3P4-202ENST00000540428 NDUFAB1O14561 156 aa10□□□□□ -0.81
CBX3P4-202ENST00000540428 IMPA2O14732 288 aa10□□□□□ -0.81
CBX3P4-202ENST00000540428 KNG1P01042 644 aa10□□□□□ -0.81
CBX3P4-202ENST00000540428 LIPFP07098 398 aa10□□□□□ -0.81
CBX3P4-202ENST00000540428 CDKN2AP42771 156 aaKnown RBP10□□□□□ -0.81
CBX3P4-202ENST00000540428 OMPP47874 163 aa10□□□□□ -0.81
CBX3P4-202ENST00000540428 RAD23AP54725 363 aa10□□□□□ -0.81
CBX3P4-202ENST00000540428 FXYD6P3P58550 94 aa10□□□□□ -0.81
CBX3P4-202ENST00000540428 RPL15P61313 204 aaKnown RBP10□□□□□ -0.81
CBX3P4-202ENST00000540428 FGF12P61328 243 aa10□□□□□ -0.81
CBX3P4-202ENST00000540428 ECH1Q13011 328 aa10□□□□□ -0.81
CBX3P4-202ENST00000540428 MAB21L1Q13394 359 aa10□□□□□ -0.81
CBX3P4-202ENST00000540428 CD276Q5ZPR3 534 aa10□□□□□ -0.81
CBX3P4-202ENST00000540428 CGB2Q6NT52 195 aa10□□□□□ -0.81
CBX3P4-202ENST00000540428 Q6YL49 198 aa10□□□□□ -0.81
CBX3P4-202ENST00000540428 ZNF841Q6ZN19 808 aa10□□□□□ -0.81
CBX3P4-202ENST00000540428 TSEN54Q7Z6J9 526 aaKnown RBP10□□□□□ -0.81
CBX3P4-202ENST00000540428 BHLHE23Q8NDY6 225 aa10□□□□□ -0.81
CBX3P4-202ENST00000540428 WFDC12Q8WWY7 111 aa10□□□□□ -0.81
CBX3P4-202ENST00000540428 FAM71F1Q96KD3 344 aaPredicted RBP10□□□□□ -0.81
CBX3P4-202ENST00000540428 SLC22A4Q9H015 551 aa10□□□□□ -0.81
CBX3P4-202ENST00000540428 FGFR1OP2Q9NVK5 253 aa10□□□□□ -0.81
CBX3P4-202ENST00000540428 GMPR2Q9P2T1 348 aaKnown RBP10□□□□□ -0.81
CBX3P4-202ENST00000540428 RPS6KA6Q9UK32 745 aa10□□□□□ -0.81
CBX3P4-202ENST00000540428 AURKCQ9UQB9 309 aa10□□□□□ -0.81
CBX3P4-202ENST00000540428 FAM32AQ9Y421 112 aaKnown RBP10□□□□□ -0.81
CBX3P4-202ENST00000540428 IGLV1-36A0A0B4J1U3 117 aa9.99□□□□□ -0.81
CBX3P4-202ENST00000540428 FAM181BA6NEQ2 426 aa9.99□□□□□ -0.81
CBX3P4-202ENST00000540428 P2RY10O00398 339 aa9.99□□□□□ -0.81
CBX3P4-202ENST00000540428 DCTN6O00399 190 aa9.99□□□□□ -0.81
CBX3P4-202ENST00000540428 NME4O00746 187 aa9.99□□□□□ -0.81
CBX3P4-202ENST00000540428 TNFRSF13BO14836 293 aaPredicted RBP9.99□□□□□ -0.81
CBX3P4-202ENST00000540428 ARPC3O15145 178 aa9.99□□□□□ -0.81
CBX3P4-202ENST00000540428 NDUFA7O95182 113 aa9.99□□□□□ -0.81
CBX3P4-202ENST00000540428 PPP1R3DO95685 299 aa9.99□□□□□ -0.81
CBX3P4-202ENST00000540428 HLA-DPB1P04440 258 aa9.99□□□□□ -0.81
CBX3P4-202ENST00000540428 CRYBA1P05813 215 aa9.99□□□□□ -0.81
CBX3P4-202ENST00000540428 ACSM4P0C7M7 580 aa9.99□□□□□ -0.81
CBX3P4-202ENST00000540428 RHCEP18577 417 aa9.99□□□□□ -0.81
CBX3P4-202ENST00000540428 MDH1P40925 334 aaKnown RBP9.99□□□□□ -0.81
CBX3P4-202ENST00000540428 GSK3BP49841 420 aa9.99□□□□□ -0.81
CBX3P4-202ENST00000540428 SLC7A2P52569 658 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms