RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 RLFQ13129 1914 aa11.76□□□□□ -0.53
DNMT1-203ENST00000540357 HMGB3O15347 200 aaKnown RBP11.76□□□□□ -0.53
DNMT1-203ENST00000540357 LRP3O75074 770 aa11.76□□□□□ -0.53
DNMT1-203ENST00000540357 PPICP45877 212 aa11.76□□□□□ -0.53
DNMT1-203ENST00000540357 SNU13P55769 128 aaKnown RBP11.76□□□□□ -0.53
DNMT1-203ENST00000540357 ACY1Q03154 408 aa11.76□□□□□ -0.53
DNMT1-203ENST00000540357 DUSP2Q05923 314 aa11.76□□□□□ -0.53
DNMT1-203ENST00000540357 ZNF425Q6IV72 752 aa11.76□□□□□ -0.53
DNMT1-203ENST00000540357 PRSS54Q6PEW0 395 aa11.76□□□□□ -0.53
DNMT1-203ENST00000540357 GLRX5Q86SX6 157 aa11.76□□□□□ -0.53
DNMT1-203ENST00000540357 ARHGEF39Q8N4T4 335 aa11.76□□□□□ -0.53
DNMT1-203ENST00000540357 PLPP5Q8NEB5 264 aa11.76□□□□□ -0.53
DNMT1-203ENST00000540357 PRRG4Q9BZD6 226 aa11.76□□□□□ -0.53
DNMT1-203ENST00000540357 BRCA1P38398 1863 aaKnown RBP11.76□□□□□ -0.53
DNMT1-203ENST00000540357 ABCD4O14678 606 aa11.76□□□□□ -0.53
DNMT1-203ENST00000540357 CD37P11049 281 aa11.76□□□□□ -0.53
DNMT1-203ENST00000540357 CD96P40200 585 aa11.76□□□□□ -0.53
DNMT1-203ENST00000540357 EIF2S3P41091 472 aaKnown RBP11.76□□□□□ -0.53
DNMT1-203ENST00000540357 RPUSD3Q6P087 351 aaKnown RBP11.76□□□□□ -0.53
DNMT1-203ENST00000540357 VN1R4Q7Z5H5 301 aa11.76□□□□□ -0.53
DNMT1-203ENST00000540357 SLC25A42Q86VD7 318 aa11.76□□□□□ -0.53
DNMT1-203ENST00000540357 LGI3Q8N145 548 aa11.76□□□□□ -0.53
DNMT1-203ENST00000540357 OR14L1PQ8NHC6 308 aa11.76□□□□□ -0.53
DNMT1-203ENST00000540357 USB1Q9BQ65 265 aaKnown RBP11.76□□□□□ -0.53
DNMT1-203ENST00000540357 LHX9Q9NQ69 397 aa11.76□□□□□ -0.53
DNMT1-203ENST00000540357 NECAP2Q9NVZ3 263 aa11.76□□□□□ -0.53
DNMT1-203ENST00000540357 AKR7A3O95154 331 aa11.75□□□□□ -0.53
DNMT1-203ENST00000540357 FPR2P25090 351 aa11.75□□□□□ -0.53
DNMT1-203ENST00000540357 OR2B8PP59922 312 aa11.75□□□□□ -0.53
DNMT1-203ENST00000540357 GABREP78334 506 aa11.75□□□□□ -0.53
DNMT1-203ENST00000540357 DHODHQ02127 395 aa11.75□□□□□ -0.53
DNMT1-203ENST00000540357 HIST2H3PS2Q5TEC6 136 aa11.75□□□□□ -0.53
DNMT1-203ENST00000540357 TFAP2EQ6VUC0 442 aa11.75□□□□□ -0.53
DNMT1-203ENST00000540357 H1FNTQ75WM6 255 aaPredicted RBP11.75□□□□□ -0.53
DNMT1-203ENST00000540357 DOK3Q7L591 496 aa11.75□□□□□ -0.53
DNMT1-203ENST00000540357 OR4N2Q8NGD1 307 aa11.75□□□□□ -0.53
DNMT1-203ENST00000540357 GPX8Q8TED1 209 aa11.75□□□□□ -0.53
DNMT1-203ENST00000540357 SLC25A38Q96DW6 304 aa11.75□□□□□ -0.53
DNMT1-203ENST00000540357 GDF2Q9UK05 429 aaPredicted RBP11.75□□□□□ -0.53
DNMT1-203ENST00000540357 TGOLN2O43493 480 aa11.75□□□□□ -0.53
DNMT1-203ENST00000540357 DCAF12L2Q5VW00 463 aa11.75□□□□□ -0.53
DNMT1-203ENST00000540357 OR5B2Q96R09 309 aa11.75□□□□□ -0.53
DNMT1-203ENST00000540357 LPAR4Q99677 370 aa11.75□□□□□ -0.53
DNMT1-203ENST00000540357 SBF1O95248 1867 aa11.75□□□□□ -0.53
DNMT1-203ENST00000540357 DUX1O43812 170 aa11.75□□□□□ -0.53
DNMT1-203ENST00000540357 GPR137BO60478 399 aa11.75□□□□□ -0.53
DNMT1-203ENST00000540357 SFT2D2O95562 160 aa11.75□□□□□ -0.53
DNMT1-203ENST00000540357 BIDP55957 195 aa11.75□□□□□ -0.53
DNMT1-203ENST00000540357 MALLQ13021 153 aa11.75□□□□□ -0.53
DNMT1-203ENST00000540357 UNQ9370/PRO34162Q6UXP9 181 aa11.75□□□□□ -0.53
DNMT1-203ENST00000540357 LILRB2Q8N423 598 aa11.75□□□□□ -0.53
DNMT1-203ENST00000540357 SLAMF6Q96DU3 332 aa11.75□□□□□ -0.53
DNMT1-203ENST00000540357 TOLLIPQ9H0E2 274 aa11.75□□□□□ -0.53
DNMT1-203ENST00000540357 CUTCQ9NTM9 273 aa11.75□□□□□ -0.53
DNMT1-203ENST00000540357 LRP12Q9Y561 859 aa11.75□□□□□ -0.53
DNMT1-203ENST00000540357 HCFC2Q9Y5Z7 792 aa11.75□□□□□ -0.53
DNMT1-203ENST00000540357 PATJQ8NI35 1801 aa11.75□□□□□ -0.53
DNMT1-203ENST00000540357 NINQ8N4C6 2090 aa11.75□□□□□ -0.53
DNMT1-203ENST00000540357 A0A0G2JK05 382 aa11.75□□□□□ -0.53
DNMT1-203ENST00000540357 E9PQ18 207 aa11.75□□□□□ -0.53
DNMT1-203ENST00000540357 MSTNO14793 375 aa11.75□□□□□ -0.53
DNMT1-203ENST00000540357 ZNF354AO60765 605 aaPredicted RBP11.75□□□□□ -0.53
DNMT1-203ENST00000540357 GLYATL2Q8WU03 294 aa11.75□□□□□ -0.53
DNMT1-203ENST00000540357 ZNF296Q8WUU4 475 aaPredicted RBP11.75□□□□□ -0.53
DNMT1-203ENST00000540357 MALSU1Q96EH3 234 aa11.75□□□□□ -0.53
DNMT1-203ENST00000540357 BANF2Q9H503 90 aa11.75□□□□□ -0.53
DNMT1-203ENST00000540357 ZMIZ1Q9ULJ6 1067 aa11.75□□□□□ -0.53
DNMT1-203ENST00000540357 ICAM5Q9UMF0 924 aa11.75□□□□□ -0.53
DNMT1-203ENST00000540357 PDE4DIPQ5VU43 2346 aa11.74□□□□□ -0.53
DNMT1-203ENST00000540357 OR2M5A3KFT3 312 aa11.74□□□□□ -0.53
DNMT1-203ENST00000540357 OR4C45A6NMZ5 311 aa11.74□□□□□ -0.53
DNMT1-203ENST00000540357 ST8SIA3O43173 380 aa11.74□□□□□ -0.53
DNMT1-203ENST00000540357 CRHP06850 196 aa11.74□□□□□ -0.53
DNMT1-203ENST00000540357 DUSP1P28562 367 aa11.74□□□□□ -0.53
DNMT1-203ENST00000540357 TOMM34Q15785 309 aaPredicted RBP11.74□□□□□ -0.53
DNMT1-203ENST00000540357 LILRA6Q6PI73 481 aa11.74□□□□□ -0.53
DNMT1-203ENST00000540357 COMTD1Q86VU5 262 aa11.74□□□□□ -0.53
DNMT1-203ENST00000540357 PLXDC1Q8IUK5 500 aa11.74□□□□□ -0.53
DNMT1-203ENST00000540357 A0A1B0GTH9 108 aa11.74□□□□□ -0.53
DNMT1-203ENST00000540357 FAM74A7A6NL05 159 aa11.74□□□□□ -0.53
DNMT1-203ENST00000540357 KLF4O43474 513 aa11.74□□□□□ -0.53
DNMT1-203ENST00000540357 ZNF16P17020 682 aaPredicted RBP11.74□□□□□ -0.53
DNMT1-203ENST00000540357 CSNK1A1P48729 337 aa11.74□□□□□ -0.53
DNMT1-203ENST00000540357 GRB2P62993 217 aaKnown RBP11.74□□□□□ -0.53
DNMT1-203ENST00000540357 KCNAB1Q14722 419 aa11.74□□□□□ -0.53
DNMT1-203ENST00000540357 FAM74A3Q4VXF1 159 aa11.74□□□□□ -0.53
DNMT1-203ENST00000540357 OR52W1Q6IF63 320 aa11.74□□□□□ -0.53
DNMT1-203ENST00000540357 P4HA3Q7Z4N8 544 aa11.74□□□□□ -0.53
DNMT1-203ENST00000540357 SEH1LQ96EE3 360 aa11.74□□□□□ -0.53
DNMT1-203ENST00000540357 OR2A5Q96R48 311 aa11.74□□□□□ -0.53
DNMT1-203ENST00000540357 GDF15Q99988 308 aa11.74□□□□□ -0.53
DNMT1-203ENST00000540357 PARP12Q9H0J9 701 aaKnown RBP11.74□□□□□ -0.53
DNMT1-203ENST00000540357 SEMA7AO75326 666 aa11.74□□□□□ -0.53
DNMT1-203ENST00000540357 CRYBA1P05813 215 aa11.74□□□□□ -0.53
DNMT1-203ENST00000540357 NQO2P16083 231 aa11.74□□□□□ -0.53
DNMT1-203ENST00000540357 ITGB8P26012 769 aa11.74□□□□□ -0.53
DNMT1-203ENST00000540357 DHPSP49366 369 aaPredicted RBP11.74□□□□□ -0.53
DNMT1-203ENST00000540357 EFNA3P52797 238 aa11.74□□□□□ -0.53
DNMT1-203ENST00000540357 ADPRHP54922 357 aa11.74□□□□□ -0.53
DNMT1-203ENST00000540357 TSPAN32Q96QS1 320 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms