RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 FAHD1Q6P587 224 aa12.8□□□□□ -0.36
UBE3B-212ENST00000540230 COLCA1Q6ZS62 124 aa12.8□□□□□ -0.36
UBE3B-212ENST00000540230 DCXRQ7Z4W1 244 aa12.8□□□□□ -0.36
UBE3B-212ENST00000540230 AMIGO2Q86SJ2 522 aa12.8□□□□□ -0.36
UBE3B-212ENST00000540230 OR5AS1Q8N127 324 aa12.8□□□□□ -0.36
UBE3B-212ENST00000540230 OTULINQ96BN8 352 aa12.8□□□□□ -0.36
UBE3B-212ENST00000540230 DUS3LQ96G46 650 aaKnown RBP12.8□□□□□ -0.36
UBE3B-212ENST00000540230 NARFLQ9H6Q4 476 aa12.8□□□□□ -0.36
UBE3B-212ENST00000540230 ZNF556Q9HAH1 456 aa12.8□□□□□ -0.36
UBE3B-212ENST00000540230 SAP30LQ9HAJ7 183 aa12.8□□□□□ -0.36
UBE3B-212ENST00000540230 TREM2Q9NZC2 230 aa12.8□□□□□ -0.36
UBE3B-212ENST00000540230 KCNG2Q9UJ96 466 aa12.8□□□□□ -0.36
UBE3B-212ENST00000540230 C5orf63A6NC05 138 aa12.79□□□□□ -0.36
UBE3B-212ENST00000540230 TPD52L2O43399 206 aaKnown RBP12.79□□□□□ -0.36
UBE3B-212ENST00000540230 MT-ND5P03915 603 aa12.79□□□□□ -0.36
UBE3B-212ENST00000540230 GPR6P46095 362 aaPredicted RBP12.79□□□□□ -0.36
UBE3B-212ENST00000540230 RGS6P49758 472 aa12.79□□□□□ -0.36
UBE3B-212ENST00000540230 ENTPD1P49961 510 aa12.79□□□□□ -0.36
UBE3B-212ENST00000540230 MRPS11P82912 194 aaKnown RBP12.79□□□□□ -0.36
UBE3B-212ENST00000540230 FAM209AQ5JX71 171 aa12.79□□□□□ -0.36
UBE3B-212ENST00000540230 CYB5R2Q6BCY4 276 aa12.79□□□□□ -0.36
UBE3B-212ENST00000540230 OR2T2Q6IF00 324 aa12.79□□□□□ -0.36
UBE3B-212ENST00000540230 PLBD1Q6P4A8 553 aa12.79□□□□□ -0.36
UBE3B-212ENST00000540230 OR5K1Q8NHB7 308 aa12.79□□□□□ -0.36
UBE3B-212ENST00000540230 LRTOMTQ8WZ04 291 aa12.79□□□□□ -0.36
UBE3B-212ENST00000540230 APOBEC3DQ96AK3 386 aaPredicted RBP12.79□□□□□ -0.36
UBE3B-212ENST00000540230 HAVCR1Q96D42 359 aa12.79□□□□□ -0.36
UBE3B-212ENST00000540230 NRBF2Q96F24 287 aa12.79□□□□□ -0.36
UBE3B-212ENST00000540230 C1QTNF5Q9BXJ0 243 aa12.79□□□□□ -0.36
UBE3B-212ENST00000540230 OR51V1Q9H2C8 321 aa12.79□□□□□ -0.36
UBE3B-212ENST00000540230 DECR2Q9NUI1 292 aa12.79□□□□□ -0.36
UBE3B-212ENST00000540230 DDX28Q9NUL7 540 aaKnown RBP12.79□□□□□ -0.36
UBE3B-212ENST00000540230 AP4S1Q9Y587 144 aa12.79□□□□□ -0.36
UBE3B-212ENST00000540230 IGHV1-69-2A0A0G2JMI3 117 aa12.78□□□□□ -0.36
UBE3B-212ENST00000540230 A8MV72 311 aaPredicted RBP12.78□□□□□ -0.36
UBE3B-212ENST00000540230 J3QW42 95 aa12.78□□□□□ -0.36
UBE3B-212ENST00000540230 ZNF593O00488 134 aaPredicted RBP12.78□□□□□ -0.36
UBE3B-212ENST00000540230 PPIHO43447 177 aaKnown RBP12.78□□□□□ -0.36
UBE3B-212ENST00000540230 MITFO75030 526 aaPredicted RBP12.78□□□□□ -0.36
UBE3B-212ENST00000540230 CRLF1O75462 422 aa12.78□□□□□ -0.36
UBE3B-212ENST00000540230 ADH4P08319 380 aa12.78□□□□□ -0.36
UBE3B-212ENST00000540230 CRYBB2P43320 205 aa12.78□□□□□ -0.36
UBE3B-212ENST00000540230 GZMKP49863 264 aa12.78□□□□□ -0.36
UBE3B-212ENST00000540230 AVPI1Q5T686 147 aa12.78□□□□□ -0.36
UBE3B-212ENST00000540230 FBXW12Q6X9E4 464 aa12.78□□□□□ -0.36
UBE3B-212ENST00000540230 PRIMA1Q86XR5 153 aa12.78□□□□□ -0.36
UBE3B-212ENST00000540230 BBS1Q8NFJ9 593 aa12.78□□□□□ -0.36
UBE3B-212ENST00000540230 CLDND2Q8NHS1 167 aa12.78□□□□□ -0.36
UBE3B-212ENST00000540230 ST7LQ8TDW4 575 aa12.78□□□□□ -0.36
UBE3B-212ENST00000540230 SLC25A19Q9HC21 320 aa12.78□□□□□ -0.36
UBE3B-212ENST00000540230 DCAF16Q9NXF7 216 aa12.78□□□□□ -0.36
UBE3B-212ENST00000540230 KIF17Q9P2E2 1029 aa12.78□□□□□ -0.36
UBE3B-212ENST00000540230 CGGBP1Q9UFW8 167 aaPredicted RBP12.78□□□□□ -0.36
UBE3B-212ENST00000540230 JMJD1CQ15652 2540 aa12.78□□□□□ -0.36
UBE3B-212ENST00000540230 M0R135 149 aa12.78□□□□□ -0.36
UBE3B-212ENST00000540230 GLCEO94923 617 aa12.78□□□□□ -0.36
UBE3B-212ENST00000540230 RAC2P15153 192 aa12.78□□□□□ -0.36
UBE3B-212ENST00000540230 TUBG1P23258 451 aa12.78□□□□□ -0.36
UBE3B-212ENST00000540230 FASP25445 335 aa12.78□□□□□ -0.36
UBE3B-212ENST00000540230 EPHA2P29317 976 aa12.78□□□□□ -0.36
UBE3B-212ENST00000540230 OTX1P32242 354 aaPredicted RBP12.78□□□□□ -0.36
UBE3B-212ENST00000540230 LIPAP38571 399 aa12.78□□□□□ -0.36
UBE3B-212ENST00000540230 CHN2P52757 468 aa12.78□□□□□ -0.36
UBE3B-212ENST00000540230 ECH1Q13011 328 aa12.78□□□□□ -0.36
UBE3B-212ENST00000540230 CDK5R2Q13319 367 aa12.78□□□□□ -0.36
UBE3B-212ENST00000540230 SNAI3Q3KNW1 292 aa12.78□□□□□ -0.36
UBE3B-212ENST00000540230 TEX30Q5JUR7 227 aa12.78□□□□□ -0.36
UBE3B-212ENST00000540230 SPATC1Q76KD6 591 aa12.78□□□□□ -0.36
UBE3B-212ENST00000540230 DPY19L4Q7Z388 723 aa12.78□□□□□ -0.36
UBE3B-212ENST00000540230 ERI1Q8IV48 349 aaKnown RBP12.78□□□□□ -0.36
UBE3B-212ENST00000540230 TIGD4Q8IY51 512 aa12.78□□□□□ -0.36
UBE3B-212ENST00000540230 OR6N2Q8NGY6 317 aa12.78□□□□□ -0.36
UBE3B-212ENST00000540230 SLAMF6Q96DU3 332 aa12.78□□□□□ -0.36
UBE3B-212ENST00000540230 ZMYND19Q96E35 227 aaPredicted RBP12.78□□□□□ -0.36
UBE3B-212ENST00000540230 ZNF799Q96GE5 643 aa12.78□□□□□ -0.36
UBE3B-212ENST00000540230 COG8Q96MW5 612 aa12.78□□□□□ -0.36
UBE3B-212ENST00000540230 AMELYQ99218 206 aa12.78□□□□□ -0.36
UBE3B-212ENST00000540230 TUBG2Q9NRH3 451 aa12.78□□□□□ -0.36
UBE3B-212ENST00000540230 PAPOLBQ9NRJ5 636 aaKnown RBP12.78□□□□□ -0.36
UBE3B-212ENST00000540230 CYSLTR2Q9NS75 346 aa12.78□□□□□ -0.36
UBE3B-212ENST00000540230 PRR23D1E9PI22 279 aaPredicted RBP12.77□□□□□ -0.37
UBE3B-212ENST00000540230 M0R129 80 aa12.77□□□□□ -0.37
UBE3B-212ENST00000540230 CIB2O75838 187 aa12.77□□□□□ -0.37
UBE3B-212ENST00000540230 LCATP04180 440 aa12.77□□□□□ -0.37
UBE3B-212ENST00000540230 CD55P08174 381 aa12.77□□□□□ -0.37
UBE3B-212ENST00000540230 PRR23D2P0DMB1 279 aaPredicted RBP12.77□□□□□ -0.37
UBE3B-212ENST00000540230 IGFBP5P24593 272 aa12.77□□□□□ -0.37
UBE3B-212ENST00000540230 GSTT1P30711 240 aa12.77□□□□□ -0.37
UBE3B-212ENST00000540230 PRKXP51817 358 aa12.77□□□□□ -0.37
UBE3B-212ENST00000540230 CRISP1P54107 249 aa12.77□□□□□ -0.37
UBE3B-212ENST00000540230 TMEM33P57088 247 aa12.77□□□□□ -0.37
UBE3B-212ENST00000540230 TNFAIP6P98066 277 aaPredicted RBP12.77□□□□□ -0.37
UBE3B-212ENST00000540230 MVKQ03426 396 aa12.77□□□□□ -0.37
UBE3B-212ENST00000540230 GK2Q14410 553 aaPredicted RBP12.77□□□□□ -0.37
UBE3B-212ENST00000540230 CCDC121Q6ZUS5 278 aa12.77□□□□□ -0.37
UBE3B-212ENST00000540230 CPOQ8IVL8 374 aa12.77□□□□□ -0.37
UBE3B-212ENST00000540230 BHLHE23Q8NDY6 225 aa12.77□□□□□ -0.37
UBE3B-212ENST00000540230 OR2Z1Q8NG97 314 aa12.77□□□□□ -0.37
UBE3B-212ENST00000540230 OR5L1Q8NGL2 311 aa12.77□□□□□ -0.37
UBE3B-212ENST00000540230 ELMOD3Q96FG2 381 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms