RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 KCNMB1Q16558 191 aa12.69□□□□□ -0.38
USB1-203ENST00000539737 ALDH16A1Q8IZ83 802 aa12.69□□□□□ -0.38
USB1-203ENST00000539737 OR6V1Q8N148 313 aa12.69□□□□□ -0.38
USB1-203ENST00000539737 SLC37A3Q8NCC5 494 aa12.69□□□□□ -0.38
USB1-203ENST00000539737 PROKR2Q8NFJ6 384 aa12.69□□□□□ -0.38
USB1-203ENST00000539737 SYNPRQ8TBG9 265 aa12.69□□□□□ -0.38
USB1-203ENST00000539737 ZMYND19Q96E35 227 aaPredicted RBP12.69□□□□□ -0.38
USB1-203ENST00000539737 TSSK2Q96PF2 358 aa12.69□□□□□ -0.38
USB1-203ENST00000539737 OR2H1Q9GZK4 316 aa12.69□□□□□ -0.38
USB1-203ENST00000539737 FN3KQ9H479 309 aa12.69□□□□□ -0.38
USB1-203ENST00000539737 ZNF665Q9H7R5 613 aa12.69□□□□□ -0.38
USB1-203ENST00000539737 CMC2Q9NRP2 79 aa12.69□□□□□ -0.38
USB1-203ENST00000539737 ENOPH1Q9UHY7 261 aa12.69□□□□□ -0.38
USB1-203ENST00000539737 SOX21Q9Y651 276 aaPredicted RBP12.69□□□□□ -0.38
USB1-203ENST00000539737 VWFP04275 2813 aa12.69□□□□□ -0.38
USB1-203ENST00000539737 DCTN6O00399 190 aa12.68□□□□□ -0.38
USB1-203ENST00000539737 TFP02787 698 aa12.68□□□□□ -0.38
USB1-203ENST00000539737 CCNOP22674 350 aa12.68□□□□□ -0.38
USB1-203ENST00000539737 SLC25A1P53007 311 aa12.68□□□□□ -0.38
USB1-203ENST00000539737 UBA52P62987 128 aaKnown RBP12.68□□□□□ -0.38
USB1-203ENST00000539737 PSG4Q00888 419 aa12.68□□□□□ -0.38
USB1-203ENST00000539737 TEKQ02763 1124 aa12.68□□□□□ -0.38
USB1-203ENST00000539737 CRMP1Q14194 572 aa12.68□□□□□ -0.38
USB1-203ENST00000539737 PDLIM3Q53GG5 364 aaPredicted RBP12.68□□□□□ -0.38
USB1-203ENST00000539737 SPRNQ5BIV9 151 aa12.68□□□□□ -0.38
USB1-203ENST00000539737 AMIGO2Q86SJ2 522 aa12.68□□□□□ -0.38
USB1-203ENST00000539737 IQCF1Q8N6M8 205 aa12.68□□□□□ -0.38
USB1-203ENST00000539737 CYB561A3Q8NBI2 242 aa12.68□□□□□ -0.38
USB1-203ENST00000539737 RBM4Q9BWF3 364 aaKnown RBP12.68□□□□□ -0.38
USB1-203ENST00000539737 OSBPL10Q9BXB5 764 aa12.68□□□□□ -0.38
USB1-203ENST00000539737 WNT5BQ9H1J7 359 aa12.68□□□□□ -0.38
USB1-203ENST00000539737 SRA1Q9HD15 236 aaKnown RBP12.68□□□□□ -0.38
USB1-203ENST00000539737 KRT84Q9NSB2 600 aa12.68□□□□□ -0.38
USB1-203ENST00000539737 TAAR3PQ9P1P4 343 aa12.68□□□□□ -0.38
USB1-203ENST00000539737 OPN4Q9UHM6 478 aa12.68□□□□□ -0.38
USB1-203ENST00000539737 NDRG4Q9ULP0 352 aaKnown RBP12.68□□□□□ -0.38
USB1-203ENST00000539737 TPD52L2O43399 206 aaKnown RBP12.67□□□□□ -0.38
USB1-203ENST00000539737 SGCEO43556 437 aa12.67□□□□□ -0.38
USB1-203ENST00000539737 DOK2O60496 412 aa12.67□□□□□ -0.38
USB1-203ENST00000539737 HLA-DQA2P01906 255 aa12.67□□□□□ -0.38
USB1-203ENST00000539737 HMGN1P05114 100 aa12.67□□□□□ -0.38
USB1-203ENST00000539737 SCG5P05408 212 aa12.67□□□□□ -0.38
USB1-203ENST00000539737 COX5BP10606 129 aa12.67□□□□□ -0.38
USB1-203ENST00000539737 PAICSP22234 425 aaKnown RBP12.67□□□□□ -0.38
USB1-203ENST00000539737 STOMP27105 288 aa12.67□□□□□ -0.38
USB1-203ENST00000539737 GCH1P30793 250 aa12.67□□□□□ -0.38
USB1-203ENST00000539737 GDI2P50395 445 aaKnown RBP12.67□□□□□ -0.38
USB1-203ENST00000539737 ESRRGP62508 458 aa12.67□□□□□ -0.38
USB1-203ENST00000539737 GINS1Q14691 196 aa12.67□□□□□ -0.38
USB1-203ENST00000539737 TSTQ16762 297 aaKnown RBP12.67□□□□□ -0.38
USB1-203ENST00000539737 PCGF3Q3KNV8 242 aa12.67□□□□□ -0.38
USB1-203ENST00000539737 TMEM255AQ5JRV8 349 aa12.67□□□□□ -0.38
USB1-203ENST00000539737 PRR31Q5SQ13 230 aa12.67□□□□□ -0.38
USB1-203ENST00000539737 C1QL2Q7Z5L3 287 aa12.67□□□□□ -0.38
USB1-203ENST00000539737 BCL6BQ8N143 479 aaPredicted RBP12.67□□□□□ -0.38
USB1-203ENST00000539737 SIGLECL1Q8N7X8 197 aa12.67□□□□□ -0.38
USB1-203ENST00000539737 SLC26A10Q8NG04 563 aa12.67□□□□□ -0.38
USB1-203ENST00000539737 AKR7LQ8NHP1 331 aa12.67□□□□□ -0.38
USB1-203ENST00000539737 DDOQ99489 341 aa12.67□□□□□ -0.38
USB1-203ENST00000539737 PRRG3Q9BZD7 231 aa12.67□□□□□ -0.38
USB1-203ENST00000539737 SEMA6AQ9H2E6 1030 aa12.67□□□□□ -0.38
USB1-203ENST00000539737 SLC25A19Q9HC21 320 aa12.67□□□□□ -0.38
USB1-203ENST00000539737 HINT3Q9NQE9 182 aaKnown RBP12.67□□□□□ -0.38
USB1-203ENST00000539737 DCAF16Q9NXF7 216 aa12.67□□□□□ -0.38
USB1-203ENST00000539737 ASH2LQ9UBL3 628 aa12.67□□□□□ -0.38
USB1-203ENST00000539737 ATPIF1Q9UII2 106 aa12.67□□□□□ -0.38
USB1-203ENST00000539737 KCNG2Q9UJ96 466 aa12.67□□□□□ -0.38
USB1-203ENST00000539737 OAZ3Q9UMX2 235 aa12.67□□□□□ -0.38
USB1-203ENST00000539737 TRAV20A0A0B4J274 112 aa12.66□□□□□ -0.38
USB1-203ENST00000539737 H3BNX3 289 aa12.66□□□□□ -0.38
USB1-203ENST00000539737 ZFP36P26651 326 aaKnown RBP12.66□□□□□ -0.38
USB1-203ENST00000539737 DAPP51397 102 aa12.66□□□□□ -0.38
USB1-203ENST00000539737 BLVRAP53004 296 aa12.66□□□□□ -0.38
USB1-203ENST00000539737 CRISP1P54107 249 aa12.66□□□□□ -0.38
USB1-203ENST00000539737 UCP2P55851 309 aa12.66□□□□□ -0.38
USB1-203ENST00000539737 TMEM33P57088 247 aa12.66□□□□□ -0.38
USB1-203ENST00000539737 LCN2P80188 198 aa12.66□□□□□ -0.38
USB1-203ENST00000539737 MRPS11P82912 194 aaKnown RBP12.66□□□□□ -0.38
USB1-203ENST00000539737 CDK5Q00535 292 aa12.66□□□□□ -0.38
USB1-203ENST00000539737 ZNF362Q5T0B9 420 aaPredicted RBP12.66□□□□□ -0.38
USB1-203ENST00000539737 KDM4DQ6B0I6 523 aa12.66□□□□□ -0.38
USB1-203ENST00000539737 ZNF774Q6NX45 483 aa12.66□□□□□ -0.38
USB1-203ENST00000539737 ARL9Q6T311 187 aa12.66□□□□□ -0.38
USB1-203ENST00000539737 C1orf174Q8IYL3 243 aa12.66□□□□□ -0.38
USB1-203ENST00000539737 BPIFB2Q8N4F0 458 aa12.66□□□□□ -0.38
USB1-203ENST00000539737 CPEB3Q8NE35 698 aaKnown RBP12.66□□□□□ -0.38
USB1-203ENST00000539737 STMN2Q93045 179 aa12.66□□□□□ -0.38
USB1-203ENST00000539737 PLEKHA8Q96JA3 519 aa12.66□□□□□ -0.38
USB1-203ENST00000539737 C1orf147Q96MC9 270 aaPredicted RBP12.66□□□□□ -0.38
USB1-203ENST00000539737 NMNAT2Q9BZQ4 307 aa12.66□□□□□ -0.38
USB1-203ENST00000539737 DECR2Q9NUI1 292 aa12.66□□□□□ -0.38
USB1-203ENST00000539737 PLEK2Q9NYT0 353 aa12.66□□□□□ -0.38
USB1-203ENST00000539737 C5orf49A4QMS7 147 aa12.65□□□□□ -0.38
USB1-203ENST00000539737 SAC3D1A6NKF1 404 aa12.65□□□□□ -0.38
USB1-203ENST00000539737 SURF4O15260 269 aa12.65□□□□□ -0.38
USB1-203ENST00000539737 ZNF250P15622 560 aa12.65□□□□□ -0.38
USB1-203ENST00000539737 ZNF823P16415 610 aa12.65□□□□□ -0.38
USB1-203ENST00000539737 SPI1P17947 270 aa12.65□□□□□ -0.38
USB1-203ENST00000539737 PYCR1P32322 319 aa12.65□□□□□ -0.38
USB1-203ENST00000539737 HTR5AP47898 357 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms