RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 FREM3P0C091 2139 aa12.99□□□□□ -0.33
CDCA3-207ENST00000538862 ACACAQ13085 2346 aa12.99□□□□□ -0.33
CDCA3-207ENST00000538862 hCG_1807616A0A1W2PRN6 198 aa12.98□□□□□ -0.33
CDCA3-207ENST00000538862 MEIS3P1A6NDR6 274 aa12.98□□□□□ -0.33
CDCA3-207ENST00000538862 MS4A18H0YCH9 400 aa12.98□□□□□ -0.33
CDCA3-207ENST00000538862 H3BUI4 141 aa12.98□□□□□ -0.33
CDCA3-207ENST00000538862 ARPC5O15511 151 aa12.98□□□□□ -0.33
CDCA3-207ENST00000538862 DUX1O43812 170 aa12.98□□□□□ -0.33
CDCA3-207ENST00000538862 SIX6O95475 246 aa12.98□□□□□ -0.33
CDCA3-207ENST00000538862 ZNF35P13682 527 aa12.98□□□□□ -0.33
CDCA3-207ENST00000538862 HOXB1P14653 301 aaPredicted RBP12.98□□□□□ -0.33
CDCA3-207ENST00000538862 DNASE1L1P49184 302 aa12.98□□□□□ -0.33
CDCA3-207ENST00000538862 DAP3P51398 398 aaKnown RBP12.98□□□□□ -0.33
CDCA3-207ENST00000538862 CFHR1Q03591 330 aa12.98□□□□□ -0.33
CDCA3-207ENST00000538862 BAMBIQ13145 260 aa12.98□□□□□ -0.33
CDCA3-207ENST00000538862 NR0B2Q15466 257 aa12.98□□□□□ -0.33
CDCA3-207ENST00000538862 MS4A18Q3C1V0 323 aa12.98□□□□□ -0.33
CDCA3-207ENST00000538862 C4orf46Q504U0 113 aa12.98□□□□□ -0.33
CDCA3-207ENST00000538862 TMEM244Q5VVB8 128 aa12.98□□□□□ -0.33
CDCA3-207ENST00000538862 ZNF627Q7L945 461 aa12.98□□□□□ -0.33
CDCA3-207ENST00000538862 CHMP1BQ7LBR1 199 aa12.98□□□□□ -0.33
CDCA3-207ENST00000538862 MDGA2Q7Z553 956 aa12.98□□□□□ -0.33
CDCA3-207ENST00000538862 KMT5CQ86Y97 462 aa12.98□□□□□ -0.33
CDCA3-207ENST00000538862 NKAIN3Q8N8D7 197 aa12.98□□□□□ -0.33
CDCA3-207ENST00000538862 OR13C3Q8NGS6 347 aa12.98□□□□□ -0.33
CDCA3-207ENST00000538862 OR8S1Q8NH09 359 aa12.98□□□□□ -0.33
CDCA3-207ENST00000538862 MFSD8Q8NHS3 518 aa12.98□□□□□ -0.33
CDCA3-207ENST00000538862 DVL3Q92997 716 aaPredicted RBP12.98□□□□□ -0.33
CDCA3-207ENST00000538862 WBP1Q96G27 269 aa12.98□□□□□ -0.33
CDCA3-207ENST00000538862 TMEM138Q9NPI0 162 aa12.98□□□□□ -0.33
CDCA3-207ENST00000538862 OR52A1Q9UKL2 312 aa12.98□□□□□ -0.33
CDCA3-207ENST00000538862 EMC9Q9Y3B6 208 aa12.98□□□□□ -0.33
CDCA3-207ENST00000538862 CACNA1BQ00975 2339 aa12.98□□□□□ -0.33
CDCA3-207ENST00000538862 ANKUB1A6NFN9 424 aa12.98□□□□□ -0.33
CDCA3-207ENST00000538862 RAB6AP20340 208 aa12.98□□□□□ -0.33
CDCA3-207ENST00000538862 RGS7BPQ6MZT1 257 aaPredicted RBP12.98□□□□□ -0.33
CDCA3-207ENST00000538862 FAM122CQ6P4D5 195 aa12.98□□□□□ -0.33
CDCA3-207ENST00000538862 PRSS58Q8IYP2 241 aa12.98□□□□□ -0.33
CDCA3-207ENST00000538862 ST7LQ8TDW4 575 aa12.98□□□□□ -0.33
CDCA3-207ENST00000538862 ANKRD11Q6UB99 2663 aaPredicted RBP12.98□□□□□ -0.33
CDCA3-207ENST00000538862 TMEM82A0PJX8 343 aa12.97□□□□□ -0.33
CDCA3-207ENST00000538862 NPIPA5E9PKD4 350 aa12.97□□□□□ -0.33
CDCA3-207ENST00000538862 MPZL1O95297 269 aa12.97□□□□□ -0.33
CDCA3-207ENST00000538862 CD74P04233 296 aa12.97□□□□□ -0.33
CDCA3-207ENST00000538862 ACSM4P0C7M7 580 aa12.97□□□□□ -0.33
CDCA3-207ENST00000538862 UBCP0CG48 685 aaKnown RBP12.97□□□□□ -0.33
CDCA3-207ENST00000538862 HLA-DOBP13765 273 aa12.97□□□□□ -0.33
CDCA3-207ENST00000538862 RPA2P15927 270 aa12.97□□□□□ -0.33
CDCA3-207ENST00000538862 APOBEC1P41238 236 aaKnown RBP12.97□□□□□ -0.33
CDCA3-207ENST00000538862 DUSP3P51452 185 aaPredicted RBP12.97□□□□□ -0.33
CDCA3-207ENST00000538862 SUMO3P55854 103 aaPredicted RBP12.97□□□□□ -0.33
CDCA3-207ENST00000538862 RNF4P78317 190 aa12.97□□□□□ -0.33
CDCA3-207ENST00000538862 TAGLNQ01995 201 aaKnown RBP12.97□□□□□ -0.33
CDCA3-207ENST00000538862 C17orf67Q0P5P2 114 aa12.97□□□□□ -0.33
CDCA3-207ENST00000538862 C1orf189Q5VU69 101 aa12.97□□□□□ -0.33
CDCA3-207ENST00000538862 TMEM65Q6PI78 240 aa12.97□□□□□ -0.33
CDCA3-207ENST00000538862 LRFN4Q6PJG9 635 aa12.97□□□□□ -0.33
CDCA3-207ENST00000538862 H1FNTQ75WM6 255 aaPredicted RBP12.97□□□□□ -0.33
CDCA3-207ENST00000538862 DCXRQ7Z4W1 244 aa12.97□□□□□ -0.33
CDCA3-207ENST00000538862 PRSS42Q7Z5A4 293 aa12.97□□□□□ -0.33
CDCA3-207ENST00000538862 LYPD6Q86Y78 171 aa12.97□□□□□ -0.33
CDCA3-207ENST00000538862 KCNK17Q96T54 332 aa12.97□□□□□ -0.33
CDCA3-207ENST00000538862 REG4Q9BYZ8 158 aa12.97□□□□□ -0.33
CDCA3-207ENST00000538862 CHST6Q9GZX3 395 aa12.97□□□□□ -0.33
CDCA3-207ENST00000538862 POFUT1Q9H488 388 aa12.97□□□□□ -0.33
CDCA3-207ENST00000538862 NPIPA1Q9UND3 350 aa12.97□□□□□ -0.33
CDCA3-207ENST00000538862 SPEF1Q9Y4P9 236 aa12.97□□□□□ -0.33
CDCA3-207ENST00000538862 COL27A1Q8IZC6 1860 aaPredicted RBP12.97□□□□□ -0.33
CDCA3-207ENST00000538862 FXYD6-FXYD2A0A087WZ82 144 aa12.96□□□□□ -0.33
CDCA3-207ENST00000538862 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.96□□□□□ -0.33
CDCA3-207ENST00000538862 TMEM269A0A1B0GVZ9 245 aa12.96□□□□□ -0.33
CDCA3-207ENST00000538862 LOC107986453A0A1B0GWG9 222 aa12.96□□□□□ -0.33
CDCA3-207ENST00000538862 CYB5AP00167 134 aa12.96□□□□□ -0.33
CDCA3-207ENST00000538862 NMBP08949 121 aa12.96□□□□□ -0.33
CDCA3-207ENST00000538862 OR4E1P0C645 316 aa12.96□□□□□ -0.33
CDCA3-207ENST00000538862 PMPCAQ10713 525 aa12.96□□□□□ -0.33
CDCA3-207ENST00000538862 CLVS2Q5SYC1 327 aa12.96□□□□□ -0.33
CDCA3-207ENST00000538862 SFRP5Q5T4F7 317 aa12.96□□□□□ -0.33
CDCA3-207ENST00000538862 DCAF12L2Q5VW00 463 aa12.96□□□□□ -0.33
CDCA3-207ENST00000538862 GSG1LQ6UXU4 331 aa12.96□□□□□ -0.33
CDCA3-207ENST00000538862 LANCL3Q6ZV70 420 aa12.96□□□□□ -0.33
CDCA3-207ENST00000538862 C12orf45Q8N5I9 185 aaPredicted RBP12.96□□□□□ -0.33
CDCA3-207ENST00000538862 OR51A2Q8NGJ7 313 aa12.96□□□□□ -0.33
CDCA3-207ENST00000538862 CCDC120Q96HB5 630 aa12.96□□□□□ -0.33
CDCA3-207ENST00000538862 CMKLR1Q99788 373 aa12.96□□□□□ -0.33
CDCA3-207ENST00000538862 TGIF2Q9GZN2 237 aa12.96□□□□□ -0.33
CDCA3-207ENST00000538862 ARL6Q9H0F7 186 aa12.96□□□□□ -0.33
CDCA3-207ENST00000538862 FXYD6Q9H0Q3 95 aa12.96□□□□□ -0.33
CDCA3-207ENST00000538862 CGGBP1Q9UFW8 167 aaPredicted RBP12.96□□□□□ -0.33
CDCA3-207ENST00000538862 MFSD2BA6NFX1 497 aa12.96□□□□□ -0.34
CDCA3-207ENST00000538862 RFPL4AA6NLU0 287 aa12.96□□□□□ -0.34
CDCA3-207ENST00000538862 ZNF736B4DX44 427 aaPredicted RBP12.96□□□□□ -0.34
CDCA3-207ENST00000538862 RFPL4AL1F8VTS6 287 aa12.96□□□□□ -0.34
CDCA3-207ENST00000538862 ZNF208O43345 1280 aa12.96□□□□□ -0.34
CDCA3-207ENST00000538862 ZNF735P0CB33 412 aa12.96□□□□□ -0.34
CDCA3-207ENST00000538862 GLB1P16278 677 aa12.96□□□□□ -0.34
CDCA3-207ENST00000538862 PRKACAP17612 351 aa12.96□□□□□ -0.34
CDCA3-207ENST00000538862 CBX5P45973 191 aa12.96□□□□□ -0.34
CDCA3-207ENST00000538862 MMP16P51512 607 aa12.96□□□□□ -0.34
CDCA3-207ENST00000538862 UBE2MP61081 183 aaKnown RBP12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms